| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067795
Identifier: 78067795
GI number: 78067795
Start: 3491790
End: 3492983
Strand: Reverse
Name: 78067795
Synonym: Bcep18194_A6326
Alternate gene names: NA
Gene position: 3492983-3491790 (Counterclockwise)
Preceding gene: 78067805
Following gene: 78067794
Centisome position: 94.56
GC content: 70.6
Gene sequence:
>1194_bases ATGAACCCGAAAGCTCACGAACCCGCTAGTTTACCTGCTCCCGGCCCTGACGCGCTTGCGCAGTCCGAAACCCTCGCCAC GCAACTGCGCGACGAGATCGCGGCGGCTGGCGGCTGGCTGCCGTTCGACCGCTTCATGGAGCGCGCGCTGTATGCGCCCG GCCTCGGCTATTACAGCGGCGGCGCGCGCAAGTTCGGGCGCCGCGCCGACGACGGCAGCGACTTCGTCACCGCGCCCGAG CTGTCGCCGCTGTTCGCGCAGACGCTCGCACAACCGGTCGCGGAAGCGCTCGCGGCGAGCGGCACGCGCGGCGTGATGGA ATTCGGCGCTGGTACCGGCAAGCTCGCGGCCGGGTTGCTCGCGGCGCTCGACGCGCTGGGCGCCGAACTCGACGAATACC TGATCGTCGACCTGTCCGGCGAGCTGCGCGAGCGGCAGCGCGACACGATCACGGCCGCCGCACCGGTGCTCGCCGCGAAG GTGCGCTGGCTCGACGCGCTGCCCGAGCGGTTCGACGGCGTCGTCGTCGGCAACGAGGTGCTCGATGCGATGCCCGTGCG CCTGTTCGCGAAGGCGGGTGGCGGATGGCAGGAGCGCGGCGTCGCGCTCGACGCGCAGCAGGCGTTCGTGTTCGAAGACC GTGCGGCGGCGCCGGCCGGCCTGCCACCGGTGCTCGCGGGTCTTGACGATGCGGCGGACGGCTACGTGACCGAGACGCAC GAGGCCGCGCTGGCGTTCACGCGCACCGTCTGCACGATGCTCGGGCGCGGCGCGGTGCTGCTGGTCGACTACGGCTTTCC CGCACACGAGTACTACCACCCGCAGCGCGACCGCGGTACGCTGATGTGCCACTACCGCCACCACGCGCACGACGATCCGT TCCTGTACCCGGGGCTGCAGGACATCACCGCGCACGTCGAATTCACCGGCATCTACGATGCGGCCGTCGCGACTGGCGCT GATTTGCTCGGCTACACGTCGCAGGCGCGCTTCCTGCTGAACGCGGGCATCACCGACGCGCTGGCCGCGATCGATCCGTC GGACATCCGCGCATTCCTGCCGGCCGCGAACGCGGTGCAGAAGCTGATCTCCGAAGCCGAGATGGGCGAGCTGTTCAAGG TGATCGCGTTCTCGCGCGGCATCGACGGCACGCTCGACGCGTTCGCGCGCGGCGACCGCTCGCACGCACTCTGA
Upstream 100 bases:
>100_bases GCCGATCGACGCGGCGTCGGCCGCGCTGCCCAGGGCACCGGTGACGAGCGCCACGCGCTGGGTCGACGTATCGGCTGAAA CGGTCATTTACAATGCCGGG
Downstream 100 bases:
>100_bases CGGAGCCGACATGCTGCGCTGGCTGATGACGACGTTCGTCGCGGTGATGATCCTGACGCGCTGCTGGCCGTGGCTCGGCA AGCTCGGCATCGGGCGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MNPKAHEPASLPAPGPDALAQSETLATQLRDEIAAAGGWLPFDRFMERALYAPGLGYYSGGARKFGRRADDGSDFVTAPE LSPLFAQTLAQPVAEALAASGTRGVMEFGAGTGKLAAGLLAALDALGAELDEYLIVDLSGELRERQRDTITAAAPVLAAK VRWLDALPERFDGVVVGNEVLDAMPVRLFAKAGGGWQERGVALDAQQAFVFEDRAAAPAGLPPVLAGLDDAADGYVTETH EAALAFTRTVCTMLGRGAVLLVDYGFPAHEYYHPQRDRGTLMCHYRHHAHDDPFLYPGLQDITAHVEFTGIYDAAVATGA DLLGYTSQARFLLNAGITDALAAIDPSDIRAFLPAANAVQKLISEAEMGELFKVIAFSRGIDGTLDAFARGDRSHAL
Sequences:
>Translated_397_residues MNPKAHEPASLPAPGPDALAQSETLATQLRDEIAAAGGWLPFDRFMERALYAPGLGYYSGGARKFGRRADDGSDFVTAPE LSPLFAQTLAQPVAEALAASGTRGVMEFGAGTGKLAAGLLAALDALGAELDEYLIVDLSGELRERQRDTITAAAPVLAAK VRWLDALPERFDGVVVGNEVLDAMPVRLFAKAGGGWQERGVALDAQQAFVFEDRAAAPAGLPPVLAGLDDAADGYVTETH EAALAFTRTVCTMLGRGAVLLVDYGFPAHEYYHPQRDRGTLMCHYRHHAHDDPFLYPGLQDITAHVEFTGIYDAAVATGA DLLGYTSQARFLLNAGITDALAAIDPSDIRAFLPAANAVQKLISEAEMGELFKVIAFSRGIDGTLDAFARGDRSHAL >Mature_397_residues MNPKAHEPASLPAPGPDALAQSETLATQLRDEIAAAGGWLPFDRFMERALYAPGLGYYSGGARKFGRRADDGSDFVTAPE LSPLFAQTLAQPVAEALAASGTRGVMEFGAGTGKLAAGLLAALDALGAELDEYLIVDLSGELRERQRDTITAAAPVLAAK VRWLDALPERFDGVVVGNEVLDAMPVRLFAKAGGGWQERGVALDAQQAFVFEDRAAAPAGLPPVLAGLDDAADGYVTETH EAALAFTRTVCTMLGRGAVLLVDYGFPAHEYYHPQRDRGTLMCHYRHHAHDDPFLYPGLQDITAHVEFTGIYDAAVATGA DLLGYTSQARFLLNAGITDALAAIDPSDIRAFLPAANAVQKLISEAEMGELFKVIAFSRGIDGTLDAFARGDRSHAL
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI193211224, Length=366, Percent_Identity=27.5956284153005, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42138; Mature: 42138
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPKAHEPASLPAPGPDALAQSETLATQLRDEIAAAGGWLPFDRFMERALYAPGLGYYSG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC GARKFGRRADDGSDFVTAPELSPLFAQTLAQPVAEALAASGTRGVMEFGAGTGKLAAGLL CHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHH AALDALGAELDEYLIVDLSGELRERQRDTITAAAPVLAAKVRWLDALPERFDGVVVGNEV HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHH LDAMPVRLFAKAGGGWQERGVALDAQQAFVFEDRAAAPAGLPPVLAGLDDAADGYVTETH HHHHHHHHHHHCCCCHHHCCEEEECCHHHEECCCCCCCCCCCHHHHCCCCCCCCCEECHH EAALAFTRTVCTMLGRGAVLLVDYGFPAHEYYHPQRDRGTLMCHYRHHAHDDPFLYPGLQ HHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCEEEEEECCCCCCCEECCCHH DITAHVEFTGIYDAAVATGADLLGYTSQARFLLNAGITDALAAIDPSDIRAFLPAANAVQ HHEEEEEEECHHHHHHHCCHHHHCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHH KLISEAEMGELFKVIAFSRGIDGTLDAFARGDRSHAL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MNPKAHEPASLPAPGPDALAQSETLATQLRDEIAAAGGWLPFDRFMERALYAPGLGYYSG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC GARKFGRRADDGSDFVTAPELSPLFAQTLAQPVAEALAASGTRGVMEFGAGTGKLAAGLL CHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHH AALDALGAELDEYLIVDLSGELRERQRDTITAAAPVLAAKVRWLDALPERFDGVVVGNEV HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHH LDAMPVRLFAKAGGGWQERGVALDAQQAFVFEDRAAAPAGLPPVLAGLDDAADGYVTETH HHHHHHHHHHHCCCCHHHCCEEEECCHHHEECCCCCCCCCCCHHHHCCCCCCCCCEECHH EAALAFTRTVCTMLGRGAVLLVDYGFPAHEYYHPQRDRGTLMCHYRHHAHDDPFLYPGLQ HHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCEEEEEECCCCCCCEECCCHH DITAHVEFTGIYDAAVATGADLLGYTSQARFLLNAGITDALAAIDPSDIRAFLPAANAVQ HHEEEEEEECHHHHHHHCCHHHHCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHH KLISEAEMGELFKVIAFSRGIDGTLDAFARGDRSHAL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA