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The map label for this gene is yrbE [C]

Identifier: 78067712

GI number: 78067712

Start: 3400067

End: 3401191

Strand: Reverse

Name: yrbE [C]

Synonym: Bcep18194_A6243

Alternate gene names: 78067712

Gene position: 3401191-3400067 (Counterclockwise)

Preceding gene: 78067719

Following gene: 78067711

Centisome position: 92.07

GC content: 68.98

Gene sequence:

>1125_bases
TTGGACTTCGAGACTCCTCCCGGCCTGTCGGTCGACGCCGGCGGCCAGGGCCAGACGGTGCGGCTGTACGGCCAGTGGAC
CGCGCTCGCGCTTGCACGCAATCGCGGCGCGGTGGCGCGTCGTGTCGCGAGCATCGCGTCCGGGCGCGTGAGCGAATGGG
ATCTGTCCGGCATCGAGCGGCTCGACCACGTCGGCGGCCAGGCGCTGTGGCGCGTGTGGGGCCGCAAGCTGCCGCCCGGC
GTCGCGTTGAGCGTGACGCAGCGCACGATCTTCGAGCGCATCGAGCGGCTCGACAGCGAGCGCGAGGCGCCCGAGCGCGT
GGTGCGCTTCGATCCCGTCACGCGGCTCGGCCAGGCGATCTTCGGGTTCGGCGAACACCTGCAGGGCGGCATCGCGATGT
TCGGCCTCGTGATCCTCGATGCGCTGTCGGTGCTGCGCCGCCCGAAGACGATGCCGTGGAAGGAAACCTCGGCGAACATC
TACAGCGCCGGCGCGCAGGCGCTGCCGATCACCGCGCTCGTCGCGTTCCTGATCGGCATCGTGCTCAGCTACCTGTCCGC
GCAGCAGCTGCAGATGTTCGGCGCGAACCGCTACATCGTGAACATCCTCGGGCTGTCGGTGATCCGCGAGCTCGGCCCGG
TGCTGTCGGCGATTCTCGTCGCGGGCCGCTCGGGCTCGGCGATCACCGCGCAGATCGGCGTGATGCGCGTGACCGAGGAG
CTCGACGCGATGCGCGTGATGGGCATCCCGCACGGGCTGCGGCTGATCCTGCCGCGCGTGCTCGCACTCGGCATCGCGAT
GCCGCTGCTCGTGATGTGGACCAACATCGTCGCGCTGACGGGCGGCGCGCTCGCCGCGAAGCTCGTGCTCGGCATCGACG
TCAATTATTTCGTGCGCTCGCTGCCGGGCGTCGTGCCGATCGCGAACCTGTACATCGGCGTCGGCAAGGGCATCGTGTTC
GGCATGCTGATCGCGCTGGTCGCCTGCCATTTCGGTTTCCGGATCAAGGCGAACTCGCAGAGCCTCGGCGAAGGCACGAC
CACGTCGGTCGTGTCGTCGATCACGGTCGTGATCCTCGCCGACGCGGTGTTCGCGATCCTGTTCCAGAACGTGGGGCTCG
GATGA

Upstream 100 bases:

>100_bases
CCCGGCGCTCCAGCGCGGCGCCCCCACGGAAATCCTCACGTCGCGTCGCCGGGCGGTTCGCTACAATGGCCGCTGTCACC
TTTTTGCAAACAACCTGCCC

Downstream 100 bases:

>100_bases
ACGCATCGAACGAAACGGACGCCCACGCCGCGGCCATCGGTGCCGGGTCGGTCGGTACCGGGCCGGCGGCGTCGGCCGAT
GCCGACGACCTCGTGATCGA

Product: ABC transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MDFETPPGLSVDAGGQGQTVRLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIERLDHVGGQALWRVWGRKLPPG
VALSVTQRTIFERIERLDSEREAPERVVRFDPVTRLGQAIFGFGEHLQGGIAMFGLVILDALSVLRRPKTMPWKETSANI
YSAGAQALPITALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEE
LDAMRVMGIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYFVRSLPGVVPIANLYIGVGKGIVF
GMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAILFQNVGLG

Sequences:

>Translated_374_residues
MDFETPPGLSVDAGGQGQTVRLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIERLDHVGGQALWRVWGRKLPPG
VALSVTQRTIFERIERLDSEREAPERVVRFDPVTRLGQAIFGFGEHLQGGIAMFGLVILDALSVLRRPKTMPWKETSANI
YSAGAQALPITALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEE
LDAMRVMGIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYFVRSLPGVVPIANLYIGVGKGIVF
GMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAILFQNVGLG
>Mature_374_residues
MDFETPPGLSVDAGGQGQTVRLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIERLDHVGGQALWRVWGRKLPPG
VALSVTQRTIFERIERLDSEREAPERVVRFDPVTRLGQAIFGFGEHLQGGIAMFGLVILDALSVLRRPKTMPWKETSANI
YSAGAQALPITALVAFLIGIVLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEE
LDAMRVMGIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYFVRSLPGVVPIANLYIGVGKGIVF
GMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAILFQNVGLG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=217, Percent_Identity=33.1797235023041, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 39914; Mature: 39914

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFETPPGLSVDAGGQGQTVRLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIER
CCCCCCCCCEECCCCCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHH
LDHVGGQALWRVWGRKLPPGVALSVTQRTIFERIERLDSEREAPERVVRFDPVTRLGQAI
HHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHH
FGFGEHLQGGIAMFGLVILDALSVLRRPKTMPWKETSANIYSAGAQALPITALVAFLIGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHH
VLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
LDAMRVMGIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYFVRS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
LPGVVPIANLYIGVGKGIVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
DAVFAILFQNVGLG
HHHHHHHHHHCCCC
>Mature Secondary Structure
MDFETPPGLSVDAGGQGQTVRLYGQWTALALARNRGAVARRVASIASGRVSEWDLSGIER
CCCCCCCCCEECCCCCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHH
LDHVGGQALWRVWGRKLPPGVALSVTQRTIFERIERLDSEREAPERVVRFDPVTRLGQAI
HHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHH
FGFGEHLQGGIAMFGLVILDALSVLRRPKTMPWKETSANIYSAGAQALPITALVAFLIGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHH
VLSYLSAQQLQMFGANRYIVNILGLSVIRELGPVLSAILVAGRSGSAITAQIGVMRVTEE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
LDAMRVMGIPHGLRLILPRVLALGIAMPLLVMWTNIVALTGGALAAKLVLGIDVNYFVRS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
LPGVVPIANLYIGVGKGIVFGMLIALVACHFGFRIKANSQSLGEGTTTSVVSSITVVILA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
DAVFAILFQNVGLG
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]