| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067710
Identifier: 78067710
GI number: 78067710
Start: 3398208
End: 3399137
Strand: Reverse
Name: 78067710
Synonym: Bcep18194_A6241
Alternate gene names: NA
Gene position: 3399137-3398208 (Counterclockwise)
Preceding gene: 78067711
Following gene: 78067709
Centisome position: 92.01
GC content: 69.89
Gene sequence:
>930_bases ATGGAAAACAAATCACATGCGTTCTGGGCCGGCCTGTTCACGATCGCGCTGACGCTCGCGATCGCGGGCACCGTGTTCTG GTTCAACGTCGACCGCACCGTGCGCGTGCCGTACGACCTGCTCGCGCGCACCAACGTGACGGGGCTGTTCCCGGACGCGG CCGTGCGCTTTCGCGGCCTCGACGTCGGCAAGGTCCAGTCGATCGGCTTCGATCGCTCGCACCCGGGCCAGATCCGGATC CGGATCCTCGTCGACCACGACGCGCCGATCACGCAGTCGACCTACGGCAGCCTCGGCTTCCAGGGCGTGACGGGCATCGC GTTCGTGCAGCTCGAGGACACGGGCCGCGACCTGGCGCCGCTGCCGTCGTCGACCAAGGCGATCGCGCAGATCCCGATGC GGCCGAGCCTGTTCGACCAGATCCAGGAGCGTGGCGACGTGCTGCTGCGGCAGCTCGAGCTGGCGGCGAAGAGCGCGAAT GCGCTGATGTCGCCCGAGATGCGCGAGCAGTTGCGCGCGACAGCCGAAAGCCTGCAGCACGCGGCCGATGGCGCCACCAC GCTGACGAAGCAGCTCGGCCCGGCGGTGACCGCGCTGCCGGAAACGATGCACGAGGTGAACCGCGCGATGGCGTCGGCGA ACACGCTGCTGCAGCCGAACGGGCCGCTCGTGTCGAACCTGAACAAGGCCGGCACGGCCGCCGAGCAGATCGGCGTCGCG CTGAACGGGCTCAACGCGCGCGTGCAGTACGACACGCTGCCGCGCTTCAATGCGCTCGCCGGCAGCGTCGGCGACGCATC GCGGCAATTGAAGGACGTGGCCGGTGAACTTGGCCGCAATCCGCGCAGTCTGTTGTTCGGTTCGCCCGGCGCGGCGCCGG GGCCCGGCGAGCCGGGCTTCGTCTGGCCGGGTGCGACGGCCGGGCAGTGA
Upstream 100 bases:
>100_bases ATTGCAGGCGCTGCCGCCCGAGCGGCGCGCGAAGCTGCCGAAGGCGGCCCTCGAACCGGCGCTGTCGAGCGTCGAGCTGT AGGCACGAAGGAATCCGCGA
Downstream 100 bases:
>100_bases TACCCATCGAAACCGGAAACATCATGCAGGAACACGCCATGCCACGAATCCTTGACCGCGCGCTGCGTCCCGCCGCGGCC GCGCTTGCCGTGCTGACGCT
Product: ABC transporter, periplasmic ligand binding protein
Products: NA
Alternate protein names: Mammalian Cell Entry Related Domain-Containing Protein; Mce Related Protein; ABC Transporter Permease; ABC-Type Transporter Periplasmic Component; ABC Membrane Transporter Periplasmic Protein; Mce Related Family; Mce Family Protein; MCE-Like Family Protein; Signal Peptide Protein; ABC-Type Transport System Protein; Periplasmic Protein; Virulence Factor Mce-Like Protein; Exported Protein
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTVRVPYDLLARTNVTGLFPDAAVRFRGLDVGKVQSIGFDRSHPGQIRI RILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLAPLPSSTKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSAN ALMSPEMREQLRATAESLQHAADGATTLTKQLGPAVTALPETMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQIGVA LNGLNARVQYDTLPRFNALAGSVGDASRQLKDVAGELGRNPRSLLFGSPGAAPGPGEPGFVWPGATAGQ
Sequences:
>Translated_309_residues MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTVRVPYDLLARTNVTGLFPDAAVRFRGLDVGKVQSIGFDRSHPGQIRI RILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLAPLPSSTKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSAN ALMSPEMREQLRATAESLQHAADGATTLTKQLGPAVTALPETMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQIGVA LNGLNARVQYDTLPRFNALAGSVGDASRQLKDVAGELGRNPRSLLFGSPGAAPGPGEPGFVWPGATAGQ >Mature_309_residues MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTVRVPYDLLARTNVTGLFPDAAVRFRGLDVGKVQSIGFDRSHPGQIRI RILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLAPLPSSTKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSAN ALMSPEMREQLRATAESLQHAADGATTLTKQLGPAVTALPETMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQIGVA LNGLNARVQYDTLPRFNALAGSVGDASRQLKDVAGELGRNPRSLLFGSPGAAPGPGEPGFVWPGATAGQ
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32813; Mature: 32813
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTVRVPYDLLARTNVTGLFPDAAVRFRGL CCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEECCHHHHHHCCCCCCCCCHHHEEECC DVGKVQSIGFDRSHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLAP CCCHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC LPSSTKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQLRATAESLQH CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AADGATTLTKQLGPAVTALPETMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQIGVA HHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCHHCHHHHHHHHH LNGLNARVQYDTLPRFNALAGSVGDASRQLKDVAGELGRNPRSLLFGSPGAAPGPGEPGF EECCCCEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCE VWPGATAGQ ECCCCCCCC >Mature Secondary Structure MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTVRVPYDLLARTNVTGLFPDAAVRFRGL CCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCEEECCHHHHHHCCCCCCCCCHHHEEECC DVGKVQSIGFDRSHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLAP CCCHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC LPSSTKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQLRATAESLQH CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AADGATTLTKQLGPAVTALPETMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQIGVA HHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCHHCHHHHHHHHH LNGLNARVQYDTLPRFNALAGSVGDASRQLKDVAGELGRNPRSLLFGSPGAAPGPGEPGF EECCCCEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCE VWPGATAGQ ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA