| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067709
Identifier: 78067709
GI number: 78067709
Start: 3397546
End: 3398169
Strand: Reverse
Name: 78067709
Synonym: Bcep18194_A6240
Alternate gene names: NA
Gene position: 3398169-3397546 (Counterclockwise)
Preceding gene: 78067710
Following gene: 78067708
Centisome position: 91.99
GC content: 74.2
Gene sequence:
>624_bases ATGCCACGAATCCTTGACCGCGCGCTGCGTCCCGCCGCGGCCGCGCTTGCCGTGCTGACGCTGTCGCTCGCGGCCGGCTG CGCCGGCAACAGCGCGGTGCTGTCGAATGTCCGCTATGACCTCGGGCCGGCCACGTCGGTCGTGACCGCGGGCCCGGGCC CCGCGCTGAAGGTGCTCGACGTCGCCGCGCCCGACGCGCTCGACTCCGACAAGTTCGCCTACCGCCTCGCGTACGTGGAC GCGCAGCACGTGGCCGTCTATCGCGACAGCCGCTGGACCGCGCCGCCCGCACAACTGCTCACGCAGCGGCTGCGCGGCGC GCTGTCGTCGCGCGGCACGGTGCTCGAAGGGTCCGACGGCGTGCGCGCGCCGACGCTCAAGGTCGACCTGAACGAATTCG AACAGGTGTTCGACGGCCAGTCGCAGAGCCACGGCGCCGTCACCGCGCGCGCGACGCTGACGCTCGACGGCAAGGTGCTC GGCCAGCGCACGTTCGTTGCACGCGCGCCGTCGAGCACGCCCGACGCGGCGGGCGGCGCCCGCGCGCTCGCGACGGCGAG CGACCAGCTCGTGTCGCAGATCGCCGCGTGGGTCGGCATGCAGGCGTACGCGGGCACGCCGTGA
Upstream 100 bases:
>100_bases GCGCGGCGCCGGGGCCCGGCGAGCCGGGCTTCGTCTGGCCGGGTGCGACGGCCGGGCAGTGATACCCATCGAAACCGGAA ACATCATGCAGGAACACGCC
Downstream 100 bases:
>100_bases CGCGTGCCGCGCAGCCGCGATGAGCGCGACCGGCACCCCTCGTGCATCGCCGCTCGCGCGGCAGGCCTTTGCCGCTTACG CGGCACTCATCGTCTACGCA
Product: ABC-type uncharacterized transport system auxiliary component-like
Products: NA
Alternate protein names: ABC-Type Transport System Auxiliary Component-Like Protein; Transcriptional Regulator; ABC-Type Transporter Auxiliary Component; ABC-Type Transport System Auxiliary Component; Exported Protein
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPRILDRALRPAAAALAVLTLSLAAGCAGNSAVLSNVRYDLGPATSVVTAGPGPALKVLDVAAPDALDSDKFAYRLAYVD AQHVAVYRDSRWTAPPAQLLTQRLRGALSSRGTVLEGSDGVRAPTLKVDLNEFEQVFDGQSQSHGAVTARATLTLDGKVL GQRTFVARAPSSTPDAAGGARALATASDQLVSQIAAWVGMQAYAGTP
Sequences:
>Translated_207_residues MPRILDRALRPAAAALAVLTLSLAAGCAGNSAVLSNVRYDLGPATSVVTAGPGPALKVLDVAAPDALDSDKFAYRLAYVD AQHVAVYRDSRWTAPPAQLLTQRLRGALSSRGTVLEGSDGVRAPTLKVDLNEFEQVFDGQSQSHGAVTARATLTLDGKVL GQRTFVARAPSSTPDAAGGARALATASDQLVSQIAAWVGMQAYAGTP >Mature_206_residues PRILDRALRPAAAALAVLTLSLAAGCAGNSAVLSNVRYDLGPATSVVTAGPGPALKVLDVAAPDALDSDKFAYRLAYVDA QHVAVYRDSRWTAPPAQLLTQRLRGALSSRGTVLEGSDGVRAPTLKVDLNEFEQVFDGQSQSHGAVTARATLTLDGKVLG QRTFVARAPSSTPDAAGGARALATASDQLVSQIAAWVGMQAYAGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21367; Mature: 21236
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRILDRALRPAAAALAVLTLSLAAGCAGNSAVLSNVRYDLGPATSVVTAGPGPALKVLD CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEECCCCCCEEEEE VAAPDALDSDKFAYRLAYVDAQHVAVYRDSRWTAPPAQLLTQRLRGALSSRGTVLEGSDG ECCCCCCCCCCCEEEEEEECCHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCC VRAPTLKVDLNEFEQVFDGQSQSHGAVTARATLTLDGKVLGQRTFVARAPSSTPDAAGGA CCCCEEEECHHHHHHHHCCCCCCCCEEEEEEEEEECCEECCCEEEEEECCCCCCCCCCCC RALATASDQLVSQIAAWVGMQAYAGTP HHHHHHHHHHHHHHHHHHCCHHCCCCC >Mature Secondary Structure PRILDRALRPAAAALAVLTLSLAAGCAGNSAVLSNVRYDLGPATSVVTAGPGPALKVLD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEECCCCCCEEEEE VAAPDALDSDKFAYRLAYVDAQHVAVYRDSRWTAPPAQLLTQRLRGALSSRGTVLEGSDG ECCCCCCCCCCCEEEEEEECCHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCC VRAPTLKVDLNEFEQVFDGQSQSHGAVTARATLTLDGKVLGQRTFVARAPSSTPDAAGGA CCCCEEEECHHHHHHHHCCCCCCCCEEEEEEEEEECCEECCCEEEEEECCCCCCCCCCCC RALATASDQLVSQIAAWVGMQAYAGTP HHHHHHHHHHHHHHHHHHCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA