| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ctaE [H]
Identifier: 78067641
GI number: 78067641
Start: 3320907
End: 3321764
Strand: Reverse
Name: ctaE [H]
Synonym: Bcep18194_A6172
Alternate gene names: 78067641
Gene position: 3321764-3320907 (Counterclockwise)
Preceding gene: 78067642
Following gene: 78067639
Centisome position: 89.92
GC content: 61.89
Gene sequence:
>858_bases ATGAGCGGTCAAAACCAGACCCCGTACTATTTCGTGCCGCATCCGTCGCAGCATCCGATCAGCGCGGCCATCGGCCTGCT GGTCATGCTCGGATCGACAGCGCTGTGGATCAACGGTCACGACTGGGCGCCGTTTACGGCGCTGCTCGGCCTGCTTTGGT TGCTCTTCACGCTGTATCACTGGTTCGGCGACGCGATCGCCGAATCGGAAGGCGGTCACTACGGCAAGAACGTCGACAAG TCGTACCGCTGGAGCATGAGCTGGTTCATCTTCTCGGAAGTGATGTTCTTCGGCGCGTTCTTCGGCGCACTGTTCTATGC ACGTGAAATCGCGCTGCACCAGCTCGGCAGTCTCGACTACAAGCTGATCTGGCCGGATTTCTCCGCCGTGTGGCCGAACG AAGGCCCCGCCGCGCTCGCCGGTCACTTCAAGACGATGGGCCCGTGGCCGATCCCGACGCTGAACACCGCATTCCTGCTG TCGTCGGGCGTGACGCTGACGATCTCGCACCACGCGCTGCGTGACGATCATCGCAAGAAGGCGATCGCCTGGCTGGCCGC GACGCTCGCGTTCGGTATCTGCTTCCTGTTCCTGCAGGGCTTCGAGTACTACCACGCGTACAACGAACTGAACCTGACGC TGAACTCGGGCGTGTACGGTTCGACGTTCTTCCTGCTGACCGGCTTCCACGGTTTCCACGTGTTCCTCGGCGGCACGATG CTCGCGGTGGTGCTGGTGCGGATGATCCGCGGCCACTTCAAGCCCGATCACCACTTCGCATTCGAAGGCGCCGCGTGGTA CTGGCACTTCGTCGACGTCGTCTGGCTCGGCCTGTACGTCGTCGTCTACTGGCTGTAA
Upstream 100 bases:
>100_bases GGCGCCGCGTGCAGGAAGGAGCGGTGGTGGTCACGCCGCGCAAGAAATAAAGCCGGAGCGGTTTCCGGTACACAAATTGG ACTGAAGTGGAGAATCAAGC
Downstream 100 bases:
>100_bases ATGGAACAACGGCCCGCGCAGCAATGCGCGGGCCGTTTTCATTGGGTTGGCCGGGCAGCGTGACTGCCGGTCTTCACCAC CCGGGCGCCGCCGCGACTCA
Product: cytochrome c oxidase, subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSGQNQTPYYFVPHPSQHPISAAIGLLVMLGSTALWINGHDWAPFTALLGLLWLLFTLYHWFGDAIAESEGGHYGKNVDK SYRWSMSWFIFSEVMFFGAFFGALFYAREIALHQLGSLDYKLIWPDFSAVWPNEGPAALAGHFKTMGPWPIPTLNTAFLL SSGVTLTISHHALRDDHRKKAIAWLAATLAFGICFLFLQGFEYYHAYNELNLTLNSGVYGSTFFLLTGFHGFHVFLGGTM LAVVLVRMIRGHFKPDHHFAFEGAAWYWHFVDVVWLGLYVVVYWL
Sequences:
>Translated_285_residues MSGQNQTPYYFVPHPSQHPISAAIGLLVMLGSTALWINGHDWAPFTALLGLLWLLFTLYHWFGDAIAESEGGHYGKNVDK SYRWSMSWFIFSEVMFFGAFFGALFYAREIALHQLGSLDYKLIWPDFSAVWPNEGPAALAGHFKTMGPWPIPTLNTAFLL SSGVTLTISHHALRDDHRKKAIAWLAATLAFGICFLFLQGFEYYHAYNELNLTLNSGVYGSTFFLLTGFHGFHVFLGGTM LAVVLVRMIRGHFKPDHHFAFEGAAWYWHFVDVVWLGLYVVVYWL >Mature_284_residues SGQNQTPYYFVPHPSQHPISAAIGLLVMLGSTALWINGHDWAPFTALLGLLWLLFTLYHWFGDAIAESEGGHYGKNVDKS YRWSMSWFIFSEVMFFGAFFGALFYAREIALHQLGSLDYKLIWPDFSAVWPNEGPAALAGHFKTMGPWPIPTLNTAFLLS SGVTLTISHHALRDDHRKKAIAWLAATLAFGICFLFLQGFEYYHAYNELNLTLNSGVYGSTFFLLTGFHGFHVFLGGTML AVVLVRMIRGHFKPDHHFAFEGAAWYWHFVDVVWLGLYVVVYWL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=281, Percent_Identity=40.2135231316726, Blast_Score=166, Evalue=2e-41, Organism=Escherichia coli, GI1786633, Length=142, Percent_Identity=30.9859154929577, Blast_Score=69, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6226542, Length=284, Percent_Identity=36.2676056338028, Blast_Score=119, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32357; Mature: 32225
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGQNQTPYYFVPHPSQHPISAAIGLLVMLGSTALWINGHDWAPFTALLGLLWLLFTLYH CCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHH WFGDAIAESEGGHYGKNVDKSYRWSMSWFIFSEVMFFGAFFGALFYAREIALHQLGSLDY HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE KLIWPDFSAVWPNEGPAALAGHFKTMGPWPIPTLNTAFLLSSGVTLTISHHALRDDHRKK EEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHHH AIAWLAATLAFGICFLFLQGFEYYHAYNELNLTLNSGVYGSTFFLLTGFHGFHVFLGGTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCHHHHHHHHHHH LAVVLVRMIRGHFKPDHHFAFEGAAWYWHFVDVVWLGLYVVVYWL HHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGQNQTPYYFVPHPSQHPISAAIGLLVMLGSTALWINGHDWAPFTALLGLLWLLFTLYH CCCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHH WFGDAIAESEGGHYGKNVDKSYRWSMSWFIFSEVMFFGAFFGALFYAREIALHQLGSLDY HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE KLIWPDFSAVWPNEGPAALAGHFKTMGPWPIPTLNTAFLLSSGVTLTISHHALRDDHRKK EEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHHH AIAWLAATLAFGICFLFLQGFEYYHAYNELNLTLNSGVYGSTFFLLTGFHGFHVFLGGTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCHHHHHHHHHHH LAVVLVRMIRGHFKPDHHFAFEGAAWYWHFVDVVWLGLYVVVYWL HHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]