Click here to switch to the map view.

The map label for this gene is tse [H]

Identifier: 78067633

GI number: 78067633

Start: 3314044

End: 3315678

Strand: Reverse

Name: tse [H]

Synonym: Bcep18194_A6164

Alternate gene names: 78067633

Gene position: 3315678-3314044 (Counterclockwise)

Preceding gene: 78067635

Following gene: 78067632

Centisome position: 89.76

GC content: 68.93

Gene sequence:

>1635_bases
GTGCGCATCGACATCGACAAAGGCACGCAGATGAGCAGAATGAGTTTGAACCGCAAGCTGTGGCTCGCGCTTGCGCTGGT
ATGGATCGGTCTCCTGGGCGTCGGCGCATGGAGCGCGTACGAGACGCGCGCGACGATGCTCGCCGAACGCAAGGCCGGCA
TCGCGAATCTCGTCGATTCGGCGGCCGGCATCGTGAAGGCGTATCACGCGCTCGCGCAGAACGGCACGCTGCCCGAGGCC
GACGCGAAGCGCGACGCGCTCGCGAGCCTGGCCGCGATGCGCTACGGCGATTCGGGCTACGTGTTCGTGATGGACTCGAA
GCCGGTCGTGCTGATGCATCCGACGCTGCCGAAGCTGGTCGGCACGCAGGTCGGCGACTATCTCGACCCGGACGGCAAGC
CGCTGTTCGTCACGATCCTGAACGCCGCGAAGGAAACCGGCAGCGGCTTCGCCGAGTATCGCGGGCGCCTGCCGCACAGC
GAGACCGCCGTGCCGAAGATCAGCTACGTCACGCGCTTTACGCCGTGGGACTGGAACATCTCGAGCGGCGTCTTCCTGAA
GGACATCGACACCATCTATTACCGGACGCTGCTCGGCCACCTCGCGGTCGTGTTCGTGATCGGCTTCGTGATCAGCGCGG
CGATGCTGGTGATCATCCGCAACGTGCGCAGCAGCCTCGGCGGCGAGCCCGACGAAGCGGCCGCGCTCGCGACGCGCATC
GCGCAGGGCGACCTGACGCAGCCGGTGCCGGTGCGCGCAGGCGATCGCACGAGCATGATGGCCGCGATGCACGACATGCA
GGCACGGCTGCAGGCGACGATCGGCGGGATTCGCCAGTCGGCCGGATCGATCGCGTCGGCGAGCCGCCAGATCTCGGCCG
GCAACGACGACCTGTCGCAGCGCACCGAGGAGCAGGCCGCTTCGCTGGAGGAAACCGCCGCGAGCATGGAGCAGCTGACC
GCGACGGTGAAACAGAACGCCGACAACGCGCGGCAGGCGAGCGGGCTGGCGAACAGCGCATCGGAGATCGCGCGCACCGG
GAGCGACGTCGTGAACCGCGTGATCGGCACGATGGGCGAGATCGACGACAGTTCGCGCAAGATCGCCGACATCATCGGCG
TGATCGAAGGCATCGCATTCCAGACCAACATCCTCGCGCTGAACGCGGCGGTCGAAGCCGCACGTGCCGGCGAGCAGGGC
CGCGGCTTCGCGGTGGTCGCGGGCGAAGTGCGCTCGCTCGCGCAGCGCAGCGCGACGGCATCGAAGGAGATCCGCGAGCT
GATCGTCGATTCGGTCGAGCGCGTGCGCAACGGGTCGACGCTGGTCGGCCAGGCCGGCACGACGATGGGCGAGATCCTGC
AGGCCGTCGCACGCGTGACCGACATCATGGGCGAGATCGCGGCGGCATCCGAGGAGCAGGCGAGCGGCATCACGCAGGTC
GGGCGCGCGGTCACGCAGATGGACCAGGTGACGCAGCAGAACGCGGCGCTCGTCGAGGAGGCTGCCGCGGCTGCCGCGTC
GCTGCAGGAACAGGCCGCGCGGCTGCGCGATGCGGTCGGCGCGTTCCGGGTCGGCGGGCAGGTGGGCGAGCCTGTATTCG
ATACGAGGGCGGCCGACCGGGCAGCGGTGGCGTGA

Upstream 100 bases:

>100_bases
GAGCGCCGGTTCGCGGTGCCCGCTCGTATTCAAGTTGTAAGCCTCGATGCCGTAAATAAATGGGCAAGCGTTTGCGCGCG
GCAGGCCGTTCGCGCGCAGC

Downstream 100 bases:

>100_bases
CGCATGCGGGCTGATGCGCGATTCGCGCAAACGCAACTAACGGCCGAACCGCGAAGGCGCCGCCAGCACCGCTGCGGTGC
ATACCCATATGAGCGGGATG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MRIDIDKGTQMSRMSLNRKLWLALALVWIGLLGVGAWSAYETRATMLAERKAGIANLVDSAAGIVKAYHALAQNGTLPEA
DAKRDALASLAAMRYGDSGYVFVMDSKPVVLMHPTLPKLVGTQVGDYLDPDGKPLFVTILNAAKETGSGFAEYRGRLPHS
ETAVPKISYVTRFTPWDWNISSGVFLKDIDTIYYRTLLGHLAVVFVIGFVISAAMLVIIRNVRSSLGGEPDEAAALATRI
AQGDLTQPVPVRAGDRTSMMAAMHDMQARLQATIGGIRQSAGSIASASRQISAGNDDLSQRTEEQAASLEETAASMEQLT
ATVKQNADNARQASGLANSASEIARTGSDVVNRVIGTMGEIDDSSRKIADIIGVIEGIAFQTNILALNAAVEAARAGEQG
RGFAVVAGEVRSLAQRSATASKEIRELIVDSVERVRNGSTLVGQAGTTMGEILQAVARVTDIMGEIAAASEEQASGITQV
GRAVTQMDQVTQQNAALVEEAAAAAASLQEQAARLRDAVGAFRVGGQVGEPVFDTRAADRAAVA

Sequences:

>Translated_544_residues
MRIDIDKGTQMSRMSLNRKLWLALALVWIGLLGVGAWSAYETRATMLAERKAGIANLVDSAAGIVKAYHALAQNGTLPEA
DAKRDALASLAAMRYGDSGYVFVMDSKPVVLMHPTLPKLVGTQVGDYLDPDGKPLFVTILNAAKETGSGFAEYRGRLPHS
ETAVPKISYVTRFTPWDWNISSGVFLKDIDTIYYRTLLGHLAVVFVIGFVISAAMLVIIRNVRSSLGGEPDEAAALATRI
AQGDLTQPVPVRAGDRTSMMAAMHDMQARLQATIGGIRQSAGSIASASRQISAGNDDLSQRTEEQAASLEETAASMEQLT
ATVKQNADNARQASGLANSASEIARTGSDVVNRVIGTMGEIDDSSRKIADIIGVIEGIAFQTNILALNAAVEAARAGEQG
RGFAVVAGEVRSLAQRSATASKEIRELIVDSVERVRNGSTLVGQAGTTMGEILQAVARVTDIMGEIAAASEEQASGITQV
GRAVTQMDQVTQQNAALVEEAAAAAASLQEQAARLRDAVGAFRVGGQVGEPVFDTRAADRAAVA
>Mature_544_residues
MRIDIDKGTQMSRMSLNRKLWLALALVWIGLLGVGAWSAYETRATMLAERKAGIANLVDSAAGIVKAYHALAQNGTLPEA
DAKRDALASLAAMRYGDSGYVFVMDSKPVVLMHPTLPKLVGTQVGDYLDPDGKPLFVTILNAAKETGSGFAEYRGRLPHS
ETAVPKISYVTRFTPWDWNISSGVFLKDIDTIYYRTLLGHLAVVFVIGFVISAAMLVIIRNVRSSLGGEPDEAAALATRI
AQGDLTQPVPVRAGDRTSMMAAMHDMQARLQATIGGIRQSAGSIASASRQISAGNDDLSQRTEEQAASLEETAASMEQLT
ATVKQNADNARQASGLANSASEIARTGSDVVNRVIGTMGEIDDSSRKIADIIGVIEGIAFQTNILALNAAVEAARAGEQG
RGFAVVAGEVRSLAQRSATASKEIRELIVDSVERVRNGSTLVGQAGTTMGEILQAVARVTDIMGEIAAASEEQASGITQV
GRAVTQMDQVTQQNAALVEEAAAAAASLQEQAARLRDAVGAFRVGGQVGEPVFDTRAADRAAVA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=328, Percent_Identity=60.9756097560976, Blast_Score=321, Evalue=9e-89,
Organism=Escherichia coli, GI1788195, Length=307, Percent_Identity=61.8892508143323, Blast_Score=313, Evalue=3e-86,
Organism=Escherichia coli, GI1787690, Length=351, Percent_Identity=55.2706552706553, Blast_Score=309, Evalue=3e-85,
Organism=Escherichia coli, GI1788194, Length=400, Percent_Identity=47.75, Blast_Score=301, Evalue=9e-83,
Organism=Escherichia coli, GI1789453, Length=246, Percent_Identity=45.9349593495935, Blast_Score=206, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57384; Mature: 57384

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDIDKGTQMSRMSLNRKLWLALALVWIGLLGVGAWSAYETRATMLAERKAGIANLVDS
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AAGIVKAYHALAQNGTLPEADAKRDALASLAAMRYGDSGYVFVMDSKPVVLMHPTLPKLV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHH
GTQVGDYLDPDGKPLFVTILNAAKETGSGFAEYRGRLPHSETAVPKISYVTRFTPWDWNI
HHHHCCCCCCCCCEEEEHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHEEECCCCCCC
SSGVFLKDIDTIYYRTLLGHLAVVFVIGFVISAAMLVIIRNVRSSLGGEPDEAAALATRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AQGDLTQPVPVRAGDRTSMMAAMHDMQARLQATIGGIRQSAGSIASASRQISAGNDDLSQ
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RTEEQAASLEETAASMEQLTATVKQNADNARQASGLANSASEIARTGSDVVNRVIGTMGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHC
IDDSSRKIADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH
SKEIRELIVDSVERVRNGSTLVGQAGTTMGEILQAVARVTDIMGEIAAASEEQASGITQV
HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH
GRAVTQMDQVTQQNAALVEEAAAAAASLQEQAARLRDAVGAFRVGGQVGEPVFDTRAADR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHH
AAVA
HCCC
>Mature Secondary Structure
MRIDIDKGTQMSRMSLNRKLWLALALVWIGLLGVGAWSAYETRATMLAERKAGIANLVDS
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AAGIVKAYHALAQNGTLPEADAKRDALASLAAMRYGDSGYVFVMDSKPVVLMHPTLPKLV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHH
GTQVGDYLDPDGKPLFVTILNAAKETGSGFAEYRGRLPHSETAVPKISYVTRFTPWDWNI
HHHHCCCCCCCCCEEEEHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHEEECCCCCCC
SSGVFLKDIDTIYYRTLLGHLAVVFVIGFVISAAMLVIIRNVRSSLGGEPDEAAALATRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AQGDLTQPVPVRAGDRTSMMAAMHDMQARLQATIGGIRQSAGSIASASRQISAGNDDLSQ
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RTEEQAASLEETAASMEQLTATVKQNADNARQASGLANSASEIARTGSDVVNRVIGTMGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHC
IDDSSRKIADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH
SKEIRELIVDSVERVRNGSTLVGQAGTTMGEILQAVARVTDIMGEIAAASEEQASGITQV
HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH
GRAVTQMDQVTQQNAALVEEAAAAAASLQEQAARLRDAVGAFRVGGQVGEPVFDTRAADR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHH
AAVA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]