| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067559
Identifier: 78067559
GI number: 78067559
Start: 3233071
End: 3233724
Strand: Direct
Name: 78067559
Synonym: Bcep18194_A6090
Alternate gene names: NA
Gene position: 3233071-3233724 (Clockwise)
Preceding gene: 78067553
Following gene: 78067560
Centisome position: 87.52
GC content: 73.24
Gene sequence:
>654_bases ATGAGCCGGCTGCTGCCCGTCGCGCGCGGCCTCGCCGCAGTCGGCGCCGTCGCGGCATACCAGGCCGGCGCGCACTACGC GGCCGCGACGCCCGGCGCGCACGGCTTCGGCCTCGCGATGGCGCTCGTGCCGCCGCTGCTGCTCGCGCTCGGCGCGGCGC TGCGCTCGCCGCATCGCGCGTGGCTCGTGCCGGCGTGGCTGCTTGCCGCCGCCGCGCTGTGGGCCACGCGCGTGCCGCTC GCCCGGCATTTCGAATGGGGCCTGTATCTGGAACACGCAAGTTTCAACCTCGCGATGGCGCTGCTGTTCGGCCGCACGCT CGCGGCCGGCCAGGTGCCGCTGTGCACGCGCTTCGCGACGATGATCCACGGCACGATCACGCCGGCCGTCGCGCGCTACA CGCGGCGGATCACGCTCGCATGGACGCTGTTCTTCGTCGCGATCGCCGCCGTGTCGACGCTGCTGTTCGCGACCGCGCCG ATCGTCACGTGGTCGACGTTCGCGAACTACCTGTCGCTGCCGCTCGTCGCCGTGATGTTCGCCGCCGAGCATGCGTGCCG GCGCTTCGCACTGCCGCACGAAGCGCGGCCGCGCATGGTCGATGCGGTGCGCGCGTATCGCGCGACGACCCACGCATCGC AGCCGTCACGATGA
Upstream 100 bases:
>100_bases TGCCGCGCCCGTCCTTCCGCTCCGTTCCGGTTCGCCCGTCCGTCCGCTGCCGCCCGGCCGCCGGTCGCGCGTTCGTGCGC CGCGTGTGCGGAGGCCGCCG
Downstream 100 bases:
>100_bases ATTCACGGCCGGCGCGGCGCCGCCGTGCGGCGCACCGGCCTTCGCTCCCGTTTTGACCGATTTATGCCGACTCACCCGCT GGTTTTTCATTCGTCTCCGG
Product: membrane protein-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSRLLPVARGLAAVGAVAAYQAGAHYAAATPGAHGFGLAMALVPPLLLALGAALRSPHRAWLVPAWLLAAAALWATRVPL ARHFEWGLYLEHASFNLAMALLFGRTLAAGQVPLCTRFATMIHGTITPAVARYTRRITLAWTLFFVAIAAVSTLLFATAP IVTWSTFANYLSLPLVAVMFAAEHACRRFALPHEARPRMVDAVRAYRATTHASQPSR
Sequences:
>Translated_217_residues MSRLLPVARGLAAVGAVAAYQAGAHYAAATPGAHGFGLAMALVPPLLLALGAALRSPHRAWLVPAWLLAAAALWATRVPL ARHFEWGLYLEHASFNLAMALLFGRTLAAGQVPLCTRFATMIHGTITPAVARYTRRITLAWTLFFVAIAAVSTLLFATAP IVTWSTFANYLSLPLVAVMFAAEHACRRFALPHEARPRMVDAVRAYRATTHASQPSR >Mature_216_residues SRLLPVARGLAAVGAVAAYQAGAHYAAATPGAHGFGLAMALVPPLLLALGAALRSPHRAWLVPAWLLAAAALWATRVPLA RHFEWGLYLEHASFNLAMALLFGRTLAAGQVPLCTRFATMIHGTITPAVARYTRRITLAWTLFFVAIAAVSTLLFATAPI VTWSTFANYLSLPLVAVMFAAEHACRRFALPHEARPRMVDAVRAYRATTHASQPSR
Specific function: Unknown
COG id: COG4648
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23320; Mature: 23189
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLPVARGLAAVGAVAAYQAGAHYAAATPGAHGFGLAMALVPPLLLALGAALRSPHRA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH WLVPAWLLAAAALWATRVPLARHFEWGLYLEHASFNLAMALLFGRTLAAGQVPLCTRFAT HHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHH MIHGTITPAVARYTRRITLAWTLFFVAIAAVSTLLFATAPIVTWSTFANYLSLPLVAVMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEHACRRFALPHEARPRMVDAVRAYRATTHASQPSR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRLLPVARGLAAVGAVAAYQAGAHYAAATPGAHGFGLAMALVPPLLLALGAALRSPHRA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH WLVPAWLLAAAALWATRVPLARHFEWGLYLEHASFNLAMALLFGRTLAAGQVPLCTRFAT HHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHH MIHGTITPAVARYTRRITLAWTLFFVAIAAVSTLLFATAPIVTWSTFANYLSLPLVAVMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEHACRRFALPHEARPRMVDAVRAYRATTHASQPSR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA