| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067543
Identifier: 78067543
GI number: 78067543
Start: 3216789
End: 3217631
Strand: Direct
Name: 78067543
Synonym: Bcep18194_A6074
Alternate gene names: NA
Gene position: 3216789-3217631 (Clockwise)
Preceding gene: 78067540
Following gene: 78067550
Centisome position: 87.08
GC content: 67.38
Gene sequence:
>843_bases ATGGAACCGATTTCAATTACCCCCGCGACCACGCTGTCGCCGGAGGATCGGGACGCGCTGTGGCGCGCGAAGCAGGTGCT CGAAAGCCCGTCGCTGACGATGAAGCTGACGGGCATGCTCGGCGCGCCGGTCGAGAAAATGATTGCCCGGCTGCCGGATT TCGCGACCGGCAAGATCAACGATGCGACCCAGCTCGCGCTGCGCAAGTGCCTGAACATCGCGCTGCGCACGCTCGGCAAG CCACCCGCGCCCGACGCCGAGCCCGACAAGCCGAGCAACCTGCTGCACAAGCTCGCGGTCGCGACGACCGGCGCGGCGGG CGGTGCGTTCGGCTTTCTCGCGCTGCCGGTCGAATTGCCGGTCACGACCACGCTGATCTTCCGCTCGGTGTGCGACATCG CACGCAGCGAGGGCGAAGACCTGAGCTCGGTCGATACGCAGCTGCAATGCCTGGCCGTGCTCGGCATGGGCGGCAATCCG GACAAGCAGGAAGAGGACGCCGATCTCGGCTATTTCGTGCTGCGCGGCGCGCTCGCGCAGGCGATCTCGAAGGCATCGTC CGACATCACGACGAAGGGGATCGCCGCGCACAGCTCGGCGGCCGTGTTCAAGCTCGTGCAGACGGTGGCGTCGCGCTTCT CGGTGCAGGTGACCGAGCAGATGGCCGCGAAGTCGATTCCGGCGATCGGCGCCGTGCTCGGCGCGACCGTCAATACGCTG TTCATCGACCACTTCCAGCAGATGGCGCACGGCCACTTCACCGTGCGCCGGCTCGAGCGCAAGTATGGCTCGGTGGCCGT CAAGGCCGCCTATCAGGCGATCGACGCCTCGCCGGCCCGCTGA
Upstream 100 bases:
>100_bases TGGCGCAACTTTTGACGTGTCAAACAATCTCAAAATTCTAGCACGCCGGAGTAATCTAGGCTGACGACGGTCAAATCGAA CCAGACCGCCAAGGAGAAAG
Downstream 100 bases:
>100_bases ACCGCACGTTCGACCGCGACGCGGCGCAGGAACGCGGCCGCGCGGTCGAGCGCGTCGCGCGCTTCGGGCACCATCGGCGC GTACAGCTGCCACACGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MEPISITPATTLSPEDRDALWRAKQVLESPSLTMKLTGMLGAPVEKMIARLPDFATGKINDATQLALRKCLNIALRTLGK PPAPDAEPDKPSNLLHKLAVATTGAAGGAFGFLALPVELPVTTTLIFRSVCDIARSEGEDLSSVDTQLQCLAVLGMGGNP DKQEEDADLGYFVLRGALAQAISKASSDITTKGIAAHSSAAVFKLVQTVASRFSVQVTEQMAAKSIPAIGAVLGATVNTL FIDHFQQMAHGHFTVRRLERKYGSVAVKAAYQAIDASPAR
Sequences:
>Translated_280_residues MEPISITPATTLSPEDRDALWRAKQVLESPSLTMKLTGMLGAPVEKMIARLPDFATGKINDATQLALRKCLNIALRTLGK PPAPDAEPDKPSNLLHKLAVATTGAAGGAFGFLALPVELPVTTTLIFRSVCDIARSEGEDLSSVDTQLQCLAVLGMGGNP DKQEEDADLGYFVLRGALAQAISKASSDITTKGIAAHSSAAVFKLVQTVASRFSVQVTEQMAAKSIPAIGAVLGATVNTL FIDHFQQMAHGHFTVRRLERKYGSVAVKAAYQAIDASPAR >Mature_280_residues MEPISITPATTLSPEDRDALWRAKQVLESPSLTMKLTGMLGAPVEKMIARLPDFATGKINDATQLALRKCLNIALRTLGK PPAPDAEPDKPSNLLHKLAVATTGAAGGAFGFLALPVELPVTTTLIFRSVCDIARSEGEDLSSVDTQLQCLAVLGMGGNP DKQEEDADLGYFVLRGALAQAISKASSDITTKGIAAHSSAAVFKLVQTVASRFSVQVTEQMAAKSIPAIGAVLGATVNTL FIDHFQQMAHGHFTVRRLERKYGSVAVKAAYQAIDASPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29608; Mature: 29608
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPISITPATTLSPEDRDALWRAKQVLESPSLTMKLTGMLGAPVEKMIARLPDFATGKIN CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHCCCHHHHHHHCCCCCCCCCC DATQLALRKCLNIALRTLGKPPAPDAEPDKPSNLLHKLAVATTGAAGGAFGFLALPVELP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHEEECCCCC VTTTLIFRSVCDIARSEGEDLSSVDTQLQCLAVLGMGGNPDKQEEDADLGYFVLRGALAQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH AISKASSDITTKGIAAHSSAAVFKLVQTVASRFSVQVTEQMAAKSIPAIGAVLGATVNTL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FIDHFQQMAHGHFTVRRLERKYGSVAVKAAYQAIDASPAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEPISITPATTLSPEDRDALWRAKQVLESPSLTMKLTGMLGAPVEKMIARLPDFATGKIN CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHCCCHHHHHHHCCCCCCCCCC DATQLALRKCLNIALRTLGKPPAPDAEPDKPSNLLHKLAVATTGAAGGAFGFLALPVELP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHEEECCCCC VTTTLIFRSVCDIARSEGEDLSSVDTQLQCLAVLGMGGNPDKQEEDADLGYFVLRGALAQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH AISKASSDITTKGIAAHSSAAVFKLVQTVASRFSVQVTEQMAAKSIPAIGAVLGATVNTL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FIDHFQQMAHGHFTVRRLERKYGSVAVKAAYQAIDASPAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA