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The map label for this gene is 78067539

Identifier: 78067539

GI number: 78067539

Start: 3212515

End: 3213795

Strand: Direct

Name: 78067539

Synonym: Bcep18194_A6070

Alternate gene names: NA

Gene position: 3212515-3213795 (Clockwise)

Preceding gene: 78067534

Following gene: 78067540

Centisome position: 86.96

GC content: 67.68

Gene sequence:

>1281_bases
ATGAAAGTTACAAACTATCAGGAAGCAACGATCGATCCGTTCGGCAAGGGTCTCGGCAATCTGCCGAGCGCGAGCGTGCC
GCTCGGCGACGCCGGCCGCCTCGAGTGGAACCTGCTTGCGGAAGACGTCAGCCTGCCGGCCGCCGTGCTTTACGAAGATC
GCATCGAACACAACCTGAACTGGATGCAGGCCTTCGTCCAGAAGTACGGCGTCAAGTTTGCGCCGCACGGCAAGACGACG
ATGGCGCCGCAACTGTTCCGCCGCCAGCTCGACGCCGGTGCCTGGGGCATCACGCTCGCGACCGCGCACCAGACGCAGGC
CGCGTATCACGGCGGCGTGCGGCGCGTGCTGCTCGCGAACCAGCTGGTCGGCCGCCAGAACATGACGATCATCGCCGGGC
TGCTGTCCGATCCCGACTTCGAATTCTTCTGCCTCGTCGATTCGGCGGAGAGCGTCGACCAGCTCGGCAGCTTCTTCGGC
GCACTGAAGAAGCCGCTGAACGTGCTGCTCGAGCTCGGCGTGCCGGGCGGCCGCGCGGGCGTACGCGATGCCGCGCAGCG
CGAGGCCGTGCTGGCCGCGATCGCGCGCTATCCGGACACGCTGAAGCTGGCCGGTATCGAACTGTACGAAGGCGTGCTGA
AGGAGGAAGGCGAGATCCGCACGTTCCTGCAGGAAGCGGTCGCGCTCACGCGCGAGCTCGCCGAAGCAGGCCGCTTCGCG
CGCACGCCGGCGATCCTGTCCGGCGCCGGGTCGGCGTGGTACGACGTGGTCGCGGAAGAATTCGCGAAGGCGTCCAACGC
CGGCTTCGCGGAAGTCGTGCTGCGTCCGGGCTGCTACCTGACGCACGATGTCGGCATCTACAAGAAGGCGCAGACCGACG
TGTTCGCGCGCAACCCGATCGCACGCACGATGGGCGAAGGGCTGCTGCCCGCGCTGCAGCTGTGGGCCTACGTGCAGTCG
GTGCCGGAGGCTGATCGCGCGATCGTCGCACTCGGCAAGCGCGACGCGGCGTTCGACGCGGGGCTGCCGGAGCCGGCGCG
CCACTTTCGCCCGGGCCGCGACACCGCGCCGCGCGACGTCGCCGCCGCCGAAGGCTGGGCCGTCACCGGGATGATGGACC
AGCACGCGTACCTGCAGATTCCGCCGGGCGCAGACGTGAAGGTCGGCGACATGGTCGCGTTCGACATCTCGCACCCGTGC
CTGACGTTCGACAAGTGGCGCCAGGTGCTCGTGCTCGATCCGAAGTTCAGCGTAACGGAAGTCGTCGAAACCTTCTTCTG
A

Upstream 100 bases:

>100_bases
GCTCGATGTTACTAAATAACATCACCGCGCCGATGCTACTTTCTGTACCATCGGCGTGTCAACTTCAGTGCAATGCATAG
TGATGATGGAGCGGGATGAC

Downstream 100 bases:

>100_bases
TACCCGTCGCGCGCCCCGCCCCGCCGCTCGTGCGGGGCGGCCGTCACGCGCGCTTCAAGCGGCCGGAGTACACTGCGCTT
TCGTCCTCGGGGCCCCAGGC

Product: amino acid aldolase or racemase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKVTNYQEATIDPFGKGLGNLPSASVPLGDAGRLEWNLLAEDVSLPAAVLYEDRIEHNLNWMQAFVQKYGVKFAPHGKTT
MAPQLFRRQLDAGAWGITLATAHQTQAAYHGGVRRVLLANQLVGRQNMTIIAGLLSDPDFEFFCLVDSAESVDQLGSFFG
ALKKPLNVLLELGVPGGRAGVRDAAQREAVLAAIARYPDTLKLAGIELYEGVLKEEGEIRTFLQEAVALTRELAEAGRFA
RTPAILSGAGSAWYDVVAEEFAKASNAGFAEVVLRPGCYLTHDVGIYKKAQTDVFARNPIARTMGEGLLPALQLWAYVQS
VPEADRAIVALGKRDAAFDAGLPEPARHFRPGRDTAPRDVAAAEGWAVTGMMDQHAYLQIPPGADVKVGDMVAFDISHPC
LTFDKWRQVLVLDPKFSVTEVVETFF

Sequences:

>Translated_426_residues
MKVTNYQEATIDPFGKGLGNLPSASVPLGDAGRLEWNLLAEDVSLPAAVLYEDRIEHNLNWMQAFVQKYGVKFAPHGKTT
MAPQLFRRQLDAGAWGITLATAHQTQAAYHGGVRRVLLANQLVGRQNMTIIAGLLSDPDFEFFCLVDSAESVDQLGSFFG
ALKKPLNVLLELGVPGGRAGVRDAAQREAVLAAIARYPDTLKLAGIELYEGVLKEEGEIRTFLQEAVALTRELAEAGRFA
RTPAILSGAGSAWYDVVAEEFAKASNAGFAEVVLRPGCYLTHDVGIYKKAQTDVFARNPIARTMGEGLLPALQLWAYVQS
VPEADRAIVALGKRDAAFDAGLPEPARHFRPGRDTAPRDVAAAEGWAVTGMMDQHAYLQIPPGADVKVGDMVAFDISHPC
LTFDKWRQVLVLDPKFSVTEVVETFF
>Mature_426_residues
MKVTNYQEATIDPFGKGLGNLPSASVPLGDAGRLEWNLLAEDVSLPAAVLYEDRIEHNLNWMQAFVQKYGVKFAPHGKTT
MAPQLFRRQLDAGAWGITLATAHQTQAAYHGGVRRVLLANQLVGRQNMTIIAGLLSDPDFEFFCLVDSAESVDQLGSFFG
ALKKPLNVLLELGVPGGRAGVRDAAQREAVLAAIARYPDTLKLAGIELYEGVLKEEGEIRTFLQEAVALTRELAEAGRFA
RTPAILSGAGSAWYDVVAEEFAKASNAGFAEVVLRPGCYLTHDVGIYKKAQTDVFARNPIARTMGEGLLPALQLWAYVQS
VPEADRAIVALGKRDAAFDAGLPEPARHFRPGRDTAPRDVAAAEGWAVTGMMDQHAYLQIPPGADVKVGDMVAFDISHPC
LTFDKWRQVLVLDPKFSVTEVVETFF

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 46309; Mature: 46309

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTNYQEATIDPFGKGLGNLPSASVPLGDAGRLEWNLLAEDVSLPAAVLYEDRIEHNLN
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHCCHH
WMQAFVQKYGVKFAPHGKTTMAPQLFRRQLDAGAWGITLATAHQTQAAYHGGVRRVLLAN
HHHHHHHHHCCEECCCCCCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHH
QLVGRQNMTIIAGLLSDPDFEFFCLVDSAESVDQLGSFFGALKKPLNVLLELGVPGGRAG
HHHCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VRDAAQREAVLAAIARYPDTLKLAGIELYEGVLKEEGEIRTFLQEAVALTRELAEAGRFA
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHH
RTPAILSGAGSAWYDVVAEEFAKASNAGFAEVVLRPGCYLTHDVGIYKKAQTDVFARNPI
CCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHEEECCCCEEEECCCCEEHHCCCHHHCCCH
ARTMGEGLLPALQLWAYVQSVPEADRAIVALGKRDAAFDAGLPEPARHFRPGRDTAPRDV
HHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCH
AAAEGWAVTGMMDQHAYLQIPPGADVKVGDMVAFDISHPCLTFDKWRQVLVLDPKFSVTE
HHCCCEEEEEEECCCCEEEECCCCCEEECCEEEEECCCCCCCHHHCCEEEEECCCCCHHH
VVETFF
HHHHHC
>Mature Secondary Structure
MKVTNYQEATIDPFGKGLGNLPSASVPLGDAGRLEWNLLAEDVSLPAAVLYEDRIEHNLN
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHCCHH
WMQAFVQKYGVKFAPHGKTTMAPQLFRRQLDAGAWGITLATAHQTQAAYHGGVRRVLLAN
HHHHHHHHHCCEECCCCCCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHH
QLVGRQNMTIIAGLLSDPDFEFFCLVDSAESVDQLGSFFGALKKPLNVLLELGVPGGRAG
HHHCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VRDAAQREAVLAAIARYPDTLKLAGIELYEGVLKEEGEIRTFLQEAVALTRELAEAGRFA
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHH
RTPAILSGAGSAWYDVVAEEFAKASNAGFAEVVLRPGCYLTHDVGIYKKAQTDVFARNPI
CCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHEEECCCCEEEECCCCEEHHCCCHHHCCCH
ARTMGEGLLPALQLWAYVQSVPEADRAIVALGKRDAAFDAGLPEPARHFRPGRDTAPRDV
HHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCH
AAAEGWAVTGMMDQHAYLQIPPGADVKVGDMVAFDISHPCLTFDKWRQVLVLDPKFSVTE
HHCCCEEEEEEECCCCEEEECCCCCEEECCEEEEECCCCCCCHHHCCEEEEECCCCCHHH
VVETFF
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]