| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is plsC [H]
Identifier: 78067500
GI number: 78067500
Start: 3168299
End: 3169063
Strand: Direct
Name: plsC [H]
Synonym: Bcep18194_A6031
Alternate gene names: 78067500
Gene position: 3168299-3169063 (Clockwise)
Preceding gene: 78067499
Following gene: 78067501
Centisome position: 85.77
GC content: 63.92
Gene sequence:
>765_bases ATGCGCTTCGTCCGTTCCCTGCTGCTGCTGATCTACTTCATCCTGTACACGGTGCCGTACGCCACCGCGTGCTTCATCGC CTTTCCGTTCATGCGCTCCGACGCGCGTTACTGGATGGCCGCCGGCTGGTGCAAGTCGACGCTGTGGGTCGTGCGCTGGC TGAACGGCATCCGCTACCGGATCGAAGGGTACGAGAACCTGCCCGACGGCCCGGCGGTGCTGCTGTCGAAGCACCAGTCC GCGTGGGAGACGCTCGCGTTTCCGGCGCTGATGCCGAGGCCGCTTTGCTACGTGTTCAAGCGCGAGTTGCTGTACGTGCC GTTCTTCGGCTGGGCGCTCGGGATGCTGCACATGGTTAACATCAACCGCAAGGAAGGCAAGAACGCGTTCACTTCCGTGA TCCGCCAGGGCAAGAAGCGCCTGTCGGAAGGCGCATGGATGATCATGTTCCCGGAAGGCACGCGCACGCCGGTCGGCAAG CAGGGCAAGTACAAGACGGGCGGCGCGCGTTTCGCGATCGAAACCGGCGCACCCGTCGTGCCGATCGCGCACAATGCAGG TCGGGTGTGGCCGCGCAACTCGTTCACGAAATTCCCGGGCGTCGTCACCGTGTCGATCGGCAAGCCGATCCCCAGCGAAG GGTTGACGCCCGATGCATTGAACTCGCAGGTCGAAGCATGGATCGAAGCGGAAATGCGCCGGATCGATCCCGATTCGTAT CGCCAGGCGGGTAATGCCGGCACGCGCGATGCCGCGCGTGTCTGA
Upstream 100 bases:
>100_bases GTTCACGACGACCTGCGCGCGTTCGCGCTCGATTTCCTTTCACACGAACACGAGTGATGCAGCCGCCGCGCGCATCCTCC CTAACGCCTGACTTACGCCG
Downstream 100 bases:
>100_bases CGCCCCCAGGTTGCAGCCGTTGCGTACGACAAAAAGAAGCGAACTGATGAAACAGCGTCCGCGGCCACGGCCTGCCGTCG TGGCCCTCGATCATCGCCAG
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRFVRSLLLLIYFILYTVPYATACFIAFPFMRSDARYWMAAGWCKSTLWVVRWLNGIRYRIEGYENLPDGPAVLLSKHQS AWETLAFPALMPRPLCYVFKRELLYVPFFGWALGMLHMVNINRKEGKNAFTSVIRQGKKRLSEGAWMIMFPEGTRTPVGK QGKYKTGGARFAIETGAPVVPIAHNAGRVWPRNSFTKFPGVVTVSIGKPIPSEGLTPDALNSQVEAWIEAEMRRIDPDSY RQAGNAGTRDAARV
Sequences:
>Translated_254_residues MRFVRSLLLLIYFILYTVPYATACFIAFPFMRSDARYWMAAGWCKSTLWVVRWLNGIRYRIEGYENLPDGPAVLLSKHQS AWETLAFPALMPRPLCYVFKRELLYVPFFGWALGMLHMVNINRKEGKNAFTSVIRQGKKRLSEGAWMIMFPEGTRTPVGK QGKYKTGGARFAIETGAPVVPIAHNAGRVWPRNSFTKFPGVVTVSIGKPIPSEGLTPDALNSQVEAWIEAEMRRIDPDSY RQAGNAGTRDAARV >Mature_254_residues MRFVRSLLLLIYFILYTVPYATACFIAFPFMRSDARYWMAAGWCKSTLWVVRWLNGIRYRIEGYENLPDGPAVLLSKHQS AWETLAFPALMPRPLCYVFKRELLYVPFFGWALGMLHMVNINRKEGKNAFTSVIRQGKKRLSEGAWMIMFPEGTRTPVGK QGKYKTGGARFAIETGAPVVPIAHNAGRVWPRNSFTKFPGVVTVSIGKPIPSEGLTPDALNSQVEAWIEAEMRRIDPDSY RQAGNAGTRDAARV
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=193, Percent_Identity=29.5336787564767, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI15100175, Length=193, Percent_Identity=29.5336787564767, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI6041665, Length=174, Percent_Identity=28.735632183908, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1789395, Length=117, Percent_Identity=32.4786324786325, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17564032, Length=239, Percent_Identity=26.7782426778243, Blast_Score=82, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320151, Length=206, Percent_Identity=25.7281553398058, Blast_Score=73, Evalue=5e-14, Organism=Drosophila melanogaster, GI281364648, Length=198, Percent_Identity=28.7878787878788, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24582856, Length=198, Percent_Identity=28.7878787878788, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24582854, Length=198, Percent_Identity=28.7878787878788, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24641614, Length=190, Percent_Identity=25.7894736842105, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24641612, Length=190, Percent_Identity=25.7894736842105, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28728; Mature: 28728
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFVRSLLLLIYFILYTVPYATACFIAFPFMRSDARYWMAAGWCKSTLWVVRWLNGIRYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEE IEGYENLPDGPAVLLSKHQSAWETLAFPALMPRPLCYVFKRELLYVPFFGWALGMLHMVN ECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC INRKEGKNAFTSVIRQGKKRLSEGAWMIMFPEGTRTPVGKQGKYKTGGARFAIETGAPVV CCHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEE PIAHNAGRVWPRNSFTKFPGVVTVSIGKPIPSEGLTPDALNSQVEAWIEAEMRRIDPDSY EEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH RQAGNAGTRDAARV HHCCCCCCCHHCCC >Mature Secondary Structure MRFVRSLLLLIYFILYTVPYATACFIAFPFMRSDARYWMAAGWCKSTLWVVRWLNGIRYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEE IEGYENLPDGPAVLLSKHQSAWETLAFPALMPRPLCYVFKRELLYVPFFGWALGMLHMVN ECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC INRKEGKNAFTSVIRQGKKRLSEGAWMIMFPEGTRTPVGKQGKYKTGGARFAIETGAPVV CCHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEE PIAHNAGRVWPRNSFTKFPGVVTVSIGKPIPSEGLTPDALNSQVEAWIEAEMRRIDPDSY EEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH RQAGNAGTRDAARV HHCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685; 7812434 [H]