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The map label for this gene is cc4 [H]

Identifier: 78067465

GI number: 78067465

Start: 3129498

End: 3130208

Strand: Direct

Name: cc4 [H]

Synonym: Bcep18194_A5996

Alternate gene names: 78067465

Gene position: 3129498-3130208 (Clockwise)

Preceding gene: 78067463

Following gene: 78067466

Centisome position: 84.72

GC content: 69.34

Gene sequence:

>711_bases
ATGTTCGGCAGCGCGGGCCTTATGAGCGCTGCCCAAGCGCAGACCAAGCCCACGGAGCAAGCGCACGCCCAGCAGGCGCC
GCTCAAGGCACCCGATACCATGGCCGAGCGCGTGCGCGGCTGTACGGCCTGCCATGGCGTCCATGGCCAGGGCACGGACA
ACGACTACTTCCCGCGTCTTGCCGGCAAGCCGGCCGAGTACCTGTACAACCAGCTCGTCAACTTCCGTGACGGCCGGCGC
AAGTACCCGCCGATGAACTACCTGCTGACGTACCTGAACGACGATTACCTGCGCGAGATGGCCGAGCATTTCTCGGCCGA
ACGCCCGCCGTACCCGGCGCCGGCGAAGCCGACGCTGCCGGCCGCGACGCTCGCGCGCGGCAAGCAGCTCGTCACGCAAG
GCGACCCGTCCCGCAAGCTGCCGGCCTGCGTGGCCTGCCACGGCGCGACGCTGACCGGCATGCAGCCGGCGATCCCGGGC
CTGGTCGGCCTGCACGCCGACTACCTGAGCGCGCAGATCGGTGCATGGCGCTCGGGCAACCGCCACGCGAAGGCGCCCGA
TTGCATGCATGACGTCGCTTCGAAGCTTTCCGACGAAGATGTGACGGCCGTGACCGCATGGCTTGCCGCGCAACCGGCGC
CCGCCAACCCCGTGCCGGCTCCGGCGCGTTCGATGAAGACTCCGCTCGCCTGCGGCAGCGAACCGCAATAA

Upstream 100 bases:

>100_bases
CGCCGAGCCGATCGTAGCCCGGACAACAGGTCCCCGTCGAATAAACATGGAGTCTCGTGTGTCTTCAAGACGCCTCTTCC
GTCCGCTGCTCGCCGTTCTG

Downstream 100 bases:

>100_bases
GGCAAGGGAGACAGACACAATGAAACGCAAGTCCCTGTTTGCACTCTCGGCCGTCGCGATCGTCGCGGCTGCCGCCCTCG
TGCCGGTCCTGTGGCCGGGC

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MFGSAGLMSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRR
KYPPMNYLLTYLNDDYLREMAEHFSAERPPYPAPAKPTLPAATLARGKQLVTQGDPSRKLPACVACHGATLTGMQPAIPG
LVGLHADYLSAQIGAWRSGNRHAKAPDCMHDVASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ

Sequences:

>Translated_236_residues
MFGSAGLMSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRR
KYPPMNYLLTYLNDDYLREMAEHFSAERPPYPAPAKPTLPAATLARGKQLVTQGDPSRKLPACVACHGATLTGMQPAIPG
LVGLHADYLSAQIGAWRSGNRHAKAPDCMHDVASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ
>Mature_236_residues
MFGSAGLMSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRR
KYPPMNYLLTYLNDDYLREMAEHFSAERPPYPAPAKPTLPAATLARGKQLVTQGDPSRKLPACVACHGATLTGMQPAIPG
LVGLHADYLSAQIGAWRSGNRHAKAPDCMHDVASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 25270; Mature: 25270

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGSAGLMSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRL
CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AGKPAEYLYNQLVNFRDGRRKYPPMNYLLTYLNDDYLREMAEHFSAERPPYPAPAKPTLP
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCC
AATLARGKQLVTQGDPSRKLPACVACHGATLTGMQPAIPGLVGLHADYLSAQIGAWRSGN
HHHHHHCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RHAKAPDCMHDVASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFGSAGLMSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRL
CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AGKPAEYLYNQLVNFRDGRRKYPPMNYLLTYLNDDYLREMAEHFSAERPPYPAPAKPTLP
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCC
AATLARGKQLVTQGDPSRKLPACVACHGATLTGMQPAIPGLVGLHADYLSAQIGAWRSGN
HHHHHHCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RHAKAPDCMHDVASKLSDEDVTAVTAWLAAQPAPANPVPAPARSMKTPLACGSEPQ
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]