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The map label for this gene is fimA [H]

Identifier: 78067442

GI number: 78067442

Start: 3103544

End: 3104140

Strand: Reverse

Name: fimA [H]

Synonym: Bcep18194_A5973

Alternate gene names: 78067442

Gene position: 3104140-3103544 (Counterclockwise)

Preceding gene: 78067443

Following gene: 78067441

Centisome position: 84.03

GC content: 70.02

Gene sequence:

>597_bases
ATGTTCGAAGCTTTTTCCGTTTCCCTGTTCCGTCGCGTGGCCGCCGATCTGCGGCGCGCGAACCGGCCGTCGCCGCGCTG
GCGGCCGGCCGGCTTTACGCTGATCGAACTGATGATCGTGCTGGCGATCGTCGGTGTGATCGCGGCGTATGCGATACCCG
CTTACCAGGATTACCTTGCGCGCTCGCGCGTCGGCGAGGGCCTTGCGCTCGCGTCGTCCGCGCGGCTCGCCGTCGCCGAC
AACGCCTCGAGCGGCGCGAGCCTCGACGGCGGCTACAGCCCGCCTGCCGCGACCCGCAACGTCGAATCGGTAGCGATCGA
CGGCGAGACCGGCCAGATTACGGTCGCATTCACCACGCGCGTCACCGCGGCCGGCGCCAATACGCTGGTGCTCGTGCCGT
CCGCGCCCGACAAGGCCGATGCGCCCACCGCCCGCGTGCCGCTCAAAAAGGGCGCGATGCAAGCCGGTGCGATCGCGTGG
GAGTGCTTTGCGGCCGGCAAGGATGCATCGTCGCTGCCGGCACCGGGAGCCGGGCCATTGCCGGGTGACGCCGCGACGTT
GCCAGCGAAATATGCACCGGCGGAGTGCCGCGCGTAG

Upstream 100 bases:

>100_bases
TGACACTGGCCGTCCGGCCGACTGCCGGATTCACGGCCCGCTGGCTACGATCGAGACGCCTGCCTTTACCGGCAGGCGTT
TTTCGTTTCCGGAGCCTGCC

Downstream 100 bases:

>100_bases
TGCCGGTGGCGGAGCAGGGCTGCGCGGGCGGCATGCCGCCCGCCGCTTCATCCGGTCGTGACGGCCGCTCCGCGTCGGGT
CGCGGCGCGAAGGCCCCGCA

Product: general secretion pathway protein H

Products: NA

Alternate protein names: Pilin; Serogroup C1 [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MFEAFSVSLFRRVAADLRRANRPSPRWRPAGFTLIELMIVLAIVGVIAAYAIPAYQDYLARSRVGEGLALASSARLAVAD
NASSGASLDGGYSPPAATRNVESVAIDGETGQITVAFTTRVTAAGANTLVLVPSAPDKADAPTARVPLKKGAMQAGAIAW
ECFAAGKDASSLPAPGAGPLPGDAATLPAKYAPAECRA

Sequences:

>Translated_198_residues
MFEAFSVSLFRRVAADLRRANRPSPRWRPAGFTLIELMIVLAIVGVIAAYAIPAYQDYLARSRVGEGLALASSARLAVAD
NASSGASLDGGYSPPAATRNVESVAIDGETGQITVAFTTRVTAAGANTLVLVPSAPDKADAPTARVPLKKGAMQAGAIAW
ECFAAGKDASSLPAPGAGPLPGDAATLPAKYAPAECRA
>Mature_198_residues
MFEAFSVSLFRRVAADLRRANRPSPRWRPAGFTLIELMIVLAIVGVIAAYAIPAYQDYLARSRVGEGLALASSARLAVAD
NASSGASLDGGYSPPAATRNVESVAIDGETGQITVAFTTRVTAAGANTLVLVPSAPDKADAPTARVPLKKGAMQAGAIAW
ECFAAGKDASSLPAPGAGPLPGDAATLPAKYAPAECRA

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 20225; Mature: 20225

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEAFSVSLFRRVAADLRRANRPSPRWRPAGFTLIELMIVLAIVGVIAAYAIPAYQDYLA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRVGEGLALASSARLAVADNASSGASLDGGYSPPAATRNVESVAIDGETGQITVAFTTR
HHHCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEE
VTAAGANTLVLVPSAPDKADAPTARVPLKKGAMQAGAIAWECFAAGKDASSLPAPGAGPL
EEECCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHCCEEEEEECCCCCCCCCCCCCCCCC
PGDAATLPAKYAPAECRA
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFEAFSVSLFRRVAADLRRANRPSPRWRPAGFTLIELMIVLAIVGVIAAYAIPAYQDYLA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRVGEGLALASSARLAVADNASSGASLDGGYSPPAATRNVESVAIDGETGQITVAFTTR
HHHCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEE
VTAAGANTLVLVPSAPDKADAPTARVPLKKGAMQAGAIAWECFAAGKDASSLPAPGAGPL
EEECCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHCCEEEEEECCCCCCCCCCCCCCCCC
PGDAATLPAKYAPAECRA
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1675419 [H]