| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is hemH
Identifier: 78067425
GI number: 78067425
Start: 3085280
End: 3086170
Strand: Reverse
Name: hemH
Synonym: Bcep18194_A5956
Alternate gene names: 78067425
Gene position: 3086170-3085280 (Counterclockwise)
Preceding gene: 78067426
Following gene: 78067424
Centisome position: 83.54
GC content: 67.0
Gene sequence:
>891_bases ATGTCTACCCTCTACGAATCCACGCTCCGCTCGCTGCCGCTCCTCGGTCGCGGCAAGGTCCGCGATAACTACGCGGTCGG CAACGACAAGCTCCTGATCGTCACGACCGATCGCCTGTCGGCATTCGACGTGGTGATGGGCGAGCCGATTCCGAACAAGG GGCGCGTGCTGAACCAGATGGCGAACTTCTGGTTCGACAAGCTCGCGCACATCGTGCCGAACCACCTGACGGGCGACGCG CCGGAAGCCGTCGTCGCGGCCGACGAGGTCGAGCAGGTGAAGGGCCGCGGCGTGGTCGTCAAGCGCCTCGAGCCGATCAT GATCGAAGCGGTCGTGCGCGGCTACCTGGCCGGCAGCGGCTGGAAGGAATACCAGGCGTCGGGCGCCGTGTGCGGCGTGC AGCTGCCGGAAGGCCTGCAGAACGCGCAGAAGCTGCCCGAGCCGATCTTCACGCCGGCCGCGAAGGCCGAGATGGGCGAG CACGACGAGAACATCACGTTCGAGGAAACCGAGCGCCGCATCGGCACCGAGCTGGCCGCGACGATCCGCGACATCTCGAT CAAGCTGTACAAGGAAGCGGCTGACTACGCGGCGACGCGCGGCATCATCATCGCCGACACGAAGTTCGAATTCGGCCTCG ACAACCACGGCCAGCTGTACCTGATGGACGAAGTGCTGACGGCCGATTCGTCGCGCTTCTGGCCGGCCGACCAGTACGAA GTCGGCACGAACCCGCCGTCGTTCGACAAGCAGTTCGTGCGCGACTGGCTCGAGGCGCAGCCGTGGGGCAAGACGGCGCC GGCGCCGGCGCTGCCGGCCGACGTCGTCGAGAAGACGGCCGCGAAGTACCAGGAAGCGCTCGAGCGCATCACGGGCCAGG CGCTCGCCTGA
Upstream 100 bases:
>100_bases CGCCCGGCCGGTTCGCCGACGTATTGCAAGACCGCCGTTCCCGCCTGCCGCGGGGAACGGCGTTTCCCTTTTTGTTTGGC TCCTTATCTGCGAAAAGACG
Downstream 100 bases:
>100_bases TCGGACTTTGCATGGGACCAGAGTAAGTGCTGAAGCACTAACTCTGGTCGACAGGAACTGAACAAATGAGTGAAATCCAG ACTGCCCACACGCACAGCGC
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSTLYESTLRSLPLLGRGKVRDNYAVGNDKLLIVTTDRLSAFDVVMGEPIPNKGRVLNQMANFWFDKLAHIVPNHLTGDA PEAVVAADEVEQVKGRGVVVKRLEPIMIEAVVRGYLAGSGWKEYQASGAVCGVQLPEGLQNAQKLPEPIFTPAAKAEMGE HDENITFEETERRIGTELAATIRDISIKLYKEAADYAATRGIIIADTKFEFGLDNHGQLYLMDEVLTADSSRFWPADQYE VGTNPPSFDKQFVRDWLEAQPWGKTAPAPALPADVVEKTAAKYQEALERITGQALA
Sequences:
>Translated_296_residues MSTLYESTLRSLPLLGRGKVRDNYAVGNDKLLIVTTDRLSAFDVVMGEPIPNKGRVLNQMANFWFDKLAHIVPNHLTGDA PEAVVAADEVEQVKGRGVVVKRLEPIMIEAVVRGYLAGSGWKEYQASGAVCGVQLPEGLQNAQKLPEPIFTPAAKAEMGE HDENITFEETERRIGTELAATIRDISIKLYKEAADYAATRGIIIADTKFEFGLDNHGQLYLMDEVLTADSSRFWPADQYE VGTNPPSFDKQFVRDWLEAQPWGKTAPAPALPADVVEKTAAKYQEALERITGQALA >Mature_295_residues STLYESTLRSLPLLGRGKVRDNYAVGNDKLLIVTTDRLSAFDVVMGEPIPNKGRVLNQMANFWFDKLAHIVPNHLTGDAP EAVVAADEVEQVKGRGVVVKRLEPIMIEAVVRGYLAGSGWKEYQASGAVCGVQLPEGLQNAQKLPEPIFTPAAKAEMGEH DENITFEETERRIGTELAATIRDISIKLYKEAADYAATRGIIIADTKFEFGLDNHGQLYLMDEVLTADSSRFWPADQYEV GTNPPSFDKQFVRDWLEAQPWGKTAPAPALPADVVEKTAAKYQEALERITGQALA
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=291, Percent_Identity=46.0481099656357, Blast_Score=265, Evalue=4e-72,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 32603; Mature: 32472
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLYESTLRSLPLLGRGKVRDNYAVGNDKLLIVTTDRLSAFDVVMGEPIPNKGRVLNQM CCHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHCCCCCCCHHHHHHH ANFWFDKLAHIVPNHLTGDAPEAVVAADEVEQVKGRGVVVKRLEPIMIEAVVRGYLAGSG HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCC WKEYQASGAVCGVQLPEGLQNAQKLPEPIFTPAAKAEMGEHDENITFEETERRIGTELAA HHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH TIRDISIKLYKEAADYAATRGIIIADTKFEFGLDNHGQLYLMDEVLTADSSRFWPADQYE HHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCCCCCEEEEHHHHHCCCCCCCCCCCCC VGTNPPSFDKQFVRDWLEAQPWGKTAPAPALPADVVEKTAAKYQEALERITGQALA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STLYESTLRSLPLLGRGKVRDNYAVGNDKLLIVTTDRLSAFDVVMGEPIPNKGRVLNQM CHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHCCCCCCCHHHHHHH ANFWFDKLAHIVPNHLTGDAPEAVVAADEVEQVKGRGVVVKRLEPIMIEAVVRGYLAGSG HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCC WKEYQASGAVCGVQLPEGLQNAQKLPEPIFTPAAKAEMGEHDENITFEETERRIGTELAA HHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH TIRDISIKLYKEAADYAATRGIIIADTKFEFGLDNHGQLYLMDEVLTADSSRFWPADQYE HHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCCCCCEEEEHHHHHCCCCCCCCCCCCC VGTNPPSFDKQFVRDWLEAQPWGKTAPAPALPADVVEKTAAKYQEALERITGQALA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA