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The map label for this gene is ycjP [C]

Identifier: 78067393

GI number: 78067393

Start: 3047627

End: 3048478

Strand: Reverse

Name: ycjP [C]

Synonym: Bcep18194_A5924

Alternate gene names: 78067393

Gene position: 3048478-3047627 (Counterclockwise)

Preceding gene: 78067394

Following gene: 78067392

Centisome position: 82.52

GC content: 64.67

Gene sequence:

>852_bases
ATGAGCGACCTGACCTTCGAAGGCCGGCGCGTGCCGGCCGTGTTCGACCTCGTGCGGCGCGCGCTGCCCGGCACGCTCGC
ATGGCTGATCGCGCTGCTGCTGTTCTTTCCGATCTTCTGGATGGCGATCACCGCGTTCAAGACCGAGCAGCAGGCGTATG
CGTCGACGCTGTTCTTCATCCCGACGCTCGACAGCTTCCGCGAGGTATTCGCGCGCAGCAACTACTTCGCGTTCGCGTGG
AATTCGGTGCTGATCTCGGCGGGCGTCACGGTGATCTCGCTGCTGTTCGCGGTGCCGGCCGCGTACGCGATGGCGTTCTT
CCCGAACCACCGCACGCAGAAGGTGCTGCTGTGGATGCTGTCGACCAAGATGATGCCGTCGGTCGGCGTGCTCGTGCCGA
TCTACCTGCTGTGGAAGAACGCGGGGCTGCTCGATACCGTGTCGGGCCTCGTGATCGTCTACACGCTGATCAACCTGCCG
ATCGCGGTGTGGATGACCTTCACGTACTTCAACGAGATCCCGAAGGACATCCTCGAAGCGGGGCGCATCGACGGCGCGTC
GACGTGGCAGGAGATCGTCTACCTGCTGATGCCGATGGCGCTGCCGGGGCTCGCGTCCACCGCGCTGCTGCTCGTGATCC
TGTCGTGGAACGAGGCGTTCTGGAGCATCAACCTGTCGAGCTCGAACGCGGCGCCGCTGACCGTGTTCATCGCGTCGTAC
TCGAGCCCCGAGGGGCTGTTCTGGGCGAAGCTGTCCGCGGCTTCGTTGCTGGCCGTCGCACCGATCCTGATCGTCGGCTG
GCTGTCGCAGAAGCAGCTCGTGCGCGGGCTCACGTTCGGAGCCGTCAAATGA

Upstream 100 bases:

>100_bases
TCGCGTCCGCCGGCGGCATCATCGCCGTGGTGGTTGCGAACGTCGTGTCGTTCTTCCTCGTGCGGATGCTCGCGCGCAAC
CTGAAGGGAGAGTACGAGAA

Downstream 100 bases:

>100_bases
CCGCGATGAACGTCCTGATCTGCGATTGCGACGGCGTGCTGATCGACAGCGAAGCGGTGGCGGCCGACGTGATCGTGCGC
GAACTCGATGCCCGCTGGCC

Product: ABC sugar transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSDLTFEGRRVPAVFDLVRRALPGTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFIPTLDSFREVFARSNYFAFAW
NSVLISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYTLINLP
IAVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASY
SSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK

Sequences:

>Translated_283_residues
MSDLTFEGRRVPAVFDLVRRALPGTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFIPTLDSFREVFARSNYFAFAW
NSVLISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYTLINLP
IAVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASY
SSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK
>Mature_282_residues
SDLTFEGRRVPAVFDLVRRALPGTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFIPTLDSFREVFARSNYFAFAWN
SVLISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYTLINLPI
AVWMTFTYFNEIPKDILEAGRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASYS
SPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=265, Percent_Identity=29.811320754717, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1790464, Length=214, Percent_Identity=34.5794392523364, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789860, Length=261, Percent_Identity=22.2222222222222, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31364; Mature: 31232

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLTFEGRRVPAVFDLVRRALPGTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFI
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
PTLDSFREVFARSNYFAFAWNSVLISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWML
CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
STKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYTLINLPIAVWMTFTYFNEIPKDILEA
HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASY
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCEEEEEEECCCCCCCEEEEEEEC
SSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK
CCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDLTFEGRRVPAVFDLVRRALPGTLAWLIALLLFFPIFWMAITAFKTEQQAYASTLFFI
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
PTLDSFREVFARSNYFAFAWNSVLISAGVTVISLLFAVPAAYAMAFFPNHRTQKVLLWML
CCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
STKMMPSVGVLVPIYLLWKNAGLLDTVSGLVIVYTLINLPIAVWMTFTYFNEIPKDILEA
HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRIDGASTWQEIVYLLMPMALPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASY
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCEEEEEEECCCCCCCEEEEEEEC
SSPEGLFWAKLSAASLLAVAPILIVGWLSQKQLVRGLTFGAVK
CCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]