| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is pepA
Identifier: 78067266
GI number: 78067266
Start: 2910470
End: 2911981
Strand: Reverse
Name: pepA
Synonym: Bcep18194_A5797
Alternate gene names: 78067266
Gene position: 2911981-2910470 (Counterclockwise)
Preceding gene: 78067270
Following gene: 78067265
Centisome position: 78.83
GC content: 67.33
Gene sequence:
>1512_bases ATGGACTTTAGCATAAAAGGCTGTGATTGGAGCAAAGGCGAGGCGAAGGGGTTCCTGACCGGGAAGTCCGACTGCATCGT GCTCGGCATCTTCGAGGCGCAGACCCTGTCGGGCGCGGCGCTCGACATCGACACGGCCACCAAGGGGCTGATTTCGCGCG TGATCAAGGCCGGCGACATGGACGGCAAGCGCGGCAAGACGCTGTTCCTGCACGAAGTGTCGGGCATCGGCGCGTCGCGC GTGCTGCTCGTCGGCCTCGGCAAGCAGGATGCTTTCAATCAGAAAGCCTATAACGATGCCGTGACGGCCGCATGGCGCGC GCTGCTGGCGACCAAGGTCGTCCAGGTCACGTTCACGCTCGCGCAACTGCCGGTCGACGAGCGCAGCTCCGACTGGGGCG TGCGCGCCGCGATTCTCGCGCTGCGCAACGAGACGTACCGCTTCACGCAGATGAAGAGCAAGCCGGAACCGGCGTCGCAC ACGCTCAAGCGCGTCGTGTTCAGCGTCGATCCGTCCGACGAAAAGGCCGCGAAGGTCGCGGTCAAGCAGGCCGTCGCGCT CGCGAACGGGATGGATCTCACCCGCGACCTCGGCAACCTGCCGGGCAACGTCTGCACGCCGACCTACCTCGGCAACACCG CGAAGAAGATCGCGAAGGATTGGGGCCTGAAGGCGGAAGTGCTCGGCCTCAAGCAGATCCAGGCGCTGAAGATGGGCTCG TTCCTGTCGGTCGCGCGCGCGTCGGTCGAGCCGCCGCAGTTCATCGTGCTGCACTACCAGGGCGCCGCCGCGAAGGCCGC GCCGGTCGTGCTGGTCGGCAAGGGCATCACGTTCGACACGGGCGGCATCTCGCTGAAGCCGGGCGAGGGCATGGACGAGA TGAAGTACGACATGTGCGGCGCGGGTTCCGTGCTCGGCACGATGCGTGCGGTCGCCGAGATGGGCCTGAAGATCAACGTC GTCGCGATCGTGCCGACCTGCGAGAACATGCCGGGCGGCAACGCGACGAAGCCGGGCGACATCGTCACCAGCATGAAGGG CCTGACGATCGAGGTGCTGAACACCGACGCCGAAGGCCGTCTGATCCTGTGCGACGCGCTCACGTATGCCGAACGCTTCA AGCCGGCCGCCGTGATCGACGTGGCCACGCTGACGGGCGCGTGCGTGATCGCGCTGGGCGGCCACAACAGCGGCCTGTTC TCGACGGACGACGCGCTCGCGGGCGAACTGCTCGACGCGTCGCGCGAAGCGAACGACCCGGCATGGCGCATGCCGCTCGA CGACGAGTACCAGGATCAGCTGAAGTCGAATTTCGCGGATCTCGCGAACATCGGCGGGCGCCCGGCCGGCGCCGTGACGG CCGCGTGCTTCCTGTCGCGCTTCACCGAGAGCTATCCGTGGGCCCACCTCGACATCGCGGGCACCGCCTGGAAGGGTGGG GCGGCGAAGGGTGCGACGGGCCGTCCGGTGCCGCTGCTCGCGCAGTTCCTGATCGACCGCGCCGGCCAGTGA
Upstream 100 bases:
>100_bases GGCTGCGCACGCGTGGTGGAGCGCTCGCGCCGCCACGGGAAAAATAGCGGATAATTGCGGCTTTCATCCTTAGCCCAGAT TTTATCCGAGGACAAGCGCG
Downstream 100 bases:
>100_bases TGGCGGTGTTGACGACGCTGCGGGTACGCGGGCAATGACGCGAATCGATTTCCACTCGAACGTCGGCGATTCGCTCGCGT ACGCGTGCCGGCTGCTGCGC
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MDFSIKGCDWSKGEAKGFLTGKSDCIVLGIFEAQTLSGAALDIDTATKGLISRVIKAGDMDGKRGKTLFLHEVSGIGASR VLLVGLGKQDAFNQKAYNDAVTAAWRALLATKVVQVTFTLAQLPVDERSSDWGVRAAILALRNETYRFTQMKSKPEPASH TLKRVVFSVDPSDEKAAKVAVKQAVALANGMDLTRDLGNLPGNVCTPTYLGNTAKKIAKDWGLKAEVLGLKQIQALKMGS FLSVARASVEPPQFIVLHYQGAAAKAAPVVLVGKGITFDTGGISLKPGEGMDEMKYDMCGAGSVLGTMRAVAEMGLKINV VAIVPTCENMPGGNATKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDVATLTGACVIALGGHNSGLF STDDALAGELLDASREANDPAWRMPLDDEYQDQLKSNFADLANIGGRPAGAVTAACFLSRFTESYPWAHLDIAGTAWKGG AAKGATGRPVPLLAQFLIDRAGQ
Sequences:
>Translated_503_residues MDFSIKGCDWSKGEAKGFLTGKSDCIVLGIFEAQTLSGAALDIDTATKGLISRVIKAGDMDGKRGKTLFLHEVSGIGASR VLLVGLGKQDAFNQKAYNDAVTAAWRALLATKVVQVTFTLAQLPVDERSSDWGVRAAILALRNETYRFTQMKSKPEPASH TLKRVVFSVDPSDEKAAKVAVKQAVALANGMDLTRDLGNLPGNVCTPTYLGNTAKKIAKDWGLKAEVLGLKQIQALKMGS FLSVARASVEPPQFIVLHYQGAAAKAAPVVLVGKGITFDTGGISLKPGEGMDEMKYDMCGAGSVLGTMRAVAEMGLKINV VAIVPTCENMPGGNATKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDVATLTGACVIALGGHNSGLF STDDALAGELLDASREANDPAWRMPLDDEYQDQLKSNFADLANIGGRPAGAVTAACFLSRFTESYPWAHLDIAGTAWKGG AAKGATGRPVPLLAQFLIDRAGQ >Mature_503_residues MDFSIKGCDWSKGEAKGFLTGKSDCIVLGIFEAQTLSGAALDIDTATKGLISRVIKAGDMDGKRGKTLFLHEVSGIGASR VLLVGLGKQDAFNQKAYNDAVTAAWRALLATKVVQVTFTLAQLPVDERSSDWGVRAAILALRNETYRFTQMKSKPEPASH TLKRVVFSVDPSDEKAAKVAVKQAVALANGMDLTRDLGNLPGNVCTPTYLGNTAKKIAKDWGLKAEVLGLKQIQALKMGS FLSVARASVEPPQFIVLHYQGAAAKAAPVVLVGKGITFDTGGISLKPGEGMDEMKYDMCGAGSVLGTMRAVAEMGLKINV VAIVPTCENMPGGNATKPGDIVTSMKGLTIEVLNTDAEGRLILCDALTYAERFKPAAVIDVATLTGACVIALGGHNSGLF STDDALAGELLDASREANDPAWRMPLDDEYQDQLKSNFADLANIGGRPAGAVTAACFLSRFTESYPWAHLDIAGTAWKGG AAKGATGRPVPLLAQFLIDRAGQ
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=492, Percent_Identity=38.2113821138211, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI47155554, Length=329, Percent_Identity=32.8267477203647, Blast_Score=134, Evalue=2e-31, Organism=Escherichia coli, GI1790710, Length=506, Percent_Identity=49.604743083004, Blast_Score=507, Evalue=1e-145, Organism=Escherichia coli, GI87082123, Length=319, Percent_Identity=41.692789968652, Blast_Score=209, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17556903, Length=321, Percent_Identity=33.9563862928349, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17565172, Length=249, Percent_Identity=30.5220883534137, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI21355725, Length=317, Percent_Identity=37.2239747634069, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI20129969, Length=523, Percent_Identity=30.5927342256214, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI24661038, Length=317, Percent_Identity=36.9085173501577, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24662227, Length=374, Percent_Identity=35.0267379679144, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI161077148, Length=492, Percent_Identity=30.8943089430894, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI20130057, Length=492, Percent_Identity=30.8943089430894, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI21355645, Length=490, Percent_Identity=30.2040816326531, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24662223, Length=490, Percent_Identity=30.2040816326531, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI19922386, Length=508, Percent_Identity=28.5433070866142, Blast_Score=175, Evalue=7e-44, Organism=Drosophila melanogaster, GI20129963, Length=510, Percent_Identity=27.2549019607843, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI221379063, Length=310, Percent_Identity=32.258064516129, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI221379062, Length=310, Percent_Identity=32.258064516129, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI21357381, Length=312, Percent_Identity=32.0512820512821, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI24646701, Length=254, Percent_Identity=30.3149606299213, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24646703, Length=254, Percent_Identity=30.3149606299213, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI21358201, Length=254, Percent_Identity=30.3149606299213, Blast_Score=89, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 53038; Mature: 53038
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSIKGCDWSKGEAKGFLTGKSDCIVLGIFEAQTLSGAALDIDTATKGLISRVIKAGDM CCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCEEECHHHHHHHHHHHHHCCCC DGKRGKTLFLHEVSGIGASRVLLVGLGKQDAFNQKAYNDAVTAAWRALLATKVVQVTFTL CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLPVDERSSDWGVRAAILALRNETYRFTQMKSKPEPASHTLKRVVFSVDPSDEKAAKVA HHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHEEECCCCCHHHHHHH VKQAVALANGMDLTRDLGNLPGNVCTPTYLGNTAKKIAKDWGLKAEVLGLKQIQALKMGS HHHHHHHHCCCHHHHHHHCCCCCCCCCHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHCH FLSVARASVEPPQFIVLHYQGAAAKAAPVVLVGKGITFDTGGISLKPGEGMDEMKYDMCG HHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCEEECCCCEEECCCCCHHHHHHHHCC AGSVLGTMRAVAEMGLKINVVAIVPTCENMPGGNATKPGDIVTSMKGLTIEVLNTDAEGR CCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCC LILCDALTYAERFKPAAVIDVATLTGACVIALGGHNSGLFSTDDALAGELLDASREANDP EEEEEHHHHHHHCCCCCEEEHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC AWRMPLDDEYQDQLKSNFADLANIGGRPAGAVTAACFLSRFTESYPWAHLDIAGTAWKGG EEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC AAKGATGRPVPLLAQFLIDRAGQ CCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MDFSIKGCDWSKGEAKGFLTGKSDCIVLGIFEAQTLSGAALDIDTATKGLISRVIKAGDM CCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCEEECHHHHHHHHHHHHHCCCC DGKRGKTLFLHEVSGIGASRVLLVGLGKQDAFNQKAYNDAVTAAWRALLATKVVQVTFTL CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLPVDERSSDWGVRAAILALRNETYRFTQMKSKPEPASHTLKRVVFSVDPSDEKAAKVA HHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHEEECCCCCHHHHHHH VKQAVALANGMDLTRDLGNLPGNVCTPTYLGNTAKKIAKDWGLKAEVLGLKQIQALKMGS HHHHHHHHCCCHHHHHHHCCCCCCCCCHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHCH FLSVARASVEPPQFIVLHYQGAAAKAAPVVLVGKGITFDTGGISLKPGEGMDEMKYDMCG HHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCEEECCCCEEECCCCCHHHHHHHHCC AGSVLGTMRAVAEMGLKINVVAIVPTCENMPGGNATKPGDIVTSMKGLTIEVLNTDAEGR CCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCC LILCDALTYAERFKPAAVIDVATLTGACVIALGGHNSGLFSTDDALAGELLDASREANDP EEEEEHHHHHHHCCCCCEEEHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC AWRMPLDDEYQDQLKSNFADLANIGGRPAGAVTAACFLSRFTESYPWAHLDIAGTAWKGG EEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC AAKGATGRPVPLLAQFLIDRAGQ CCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA