Click here to switch to the map view.

The map label for this gene is 78067142

Identifier: 78067142

GI number: 78067142

Start: 2779697

End: 2780056

Strand: Reverse

Name: 78067142

Synonym: Bcep18194_A5673

Alternate gene names: NA

Gene position: 2780056-2779697 (Counterclockwise)

Preceding gene: 78067148

Following gene: 78067141

Centisome position: 75.26

GC content: 64.17

Gene sequence:

>360_bases
ATGAACAAATTCGTCGGCAAACACGTCGTTGTCGCAGCGCTCGTGGCGCTCGCGGGCAGCGCGCAGGCGGCCGGTGTGGT
CGGCAACCCGAAGGACGGGGCGAGCAAGGCCGCCATGTGCATCGGTTGCCACGGCATCCAGGACTACCGCGCGGCGTACC
CGGAGGTCTACCGGGTGCCTGTCCTCGGCGGCCAGAACCAGCAATACCTCGAGAACGCGCTGAAGGCCTACCGCAAGAAG
GATCGTCACTTCCCGTCGATGAATGCGATCGCCGGTTCGCTGACGGACCAGGACATCGCGGATCTGGCGGCGTACTACGC
CGTGCAGAAGGCCGACACGAAGGACAATCCCTACAAGTAA

Upstream 100 bases:

>100_bases
TGGCCGTTTTTTTTGGCCTGCGTGGCGACCTGATAAGCATAACGGCGCGGGCCGTTGCCGCTTTGGCGCCAGTTTCCCCT
CAAGCTAGGTTACAAGAGCT

Downstream 100 bases:

>100_bases
AGCGCGCGCCGCCGATCTGACCGGCGGGACAGGAGCATTCATGAACAACGCATTCAAGACGGCGGCGGTTGCACTGGCGG
CCGGCCTCGCGATCGGTACC

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome C; Cytochrome; Cytochrome C Class IC; Cytochrome C Class ICCytochrome C Class I; Class I Cytochrome C; Cytochrome C-Type Protein; Cytochrome C Family Protein; Cytochrome C Protein; Periplasmic Cytochrome; Cytochrome C Class Ic; Cytochrome C Family

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNKFVGKHVVVAALVALAGSAQAAGVVGNPKDGASKAAMCIGCHGIQDYRAAYPEVYRVPVLGGQNQQYLENALKAYRKK
DRHFPSMNAIAGSLTDQDIADLAAYYAVQKADTKDNPYK

Sequences:

>Translated_119_residues
MNKFVGKHVVVAALVALAGSAQAAGVVGNPKDGASKAAMCIGCHGIQDYRAAYPEVYRVPVLGGQNQQYLENALKAYRKK
DRHFPSMNAIAGSLTDQDIADLAAYYAVQKADTKDNPYK
>Mature_119_residues
MNKFVGKHVVVAALVALAGSAQAAGVVGNPKDGASKAAMCIGCHGIQDYRAAYPEVYRVPVLGGQNQQYLENALKAYRKK
DRHFPSMNAIAGSLTDQDIADLAAYYAVQKADTKDNPYK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12731; Mature: 12731

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFVGKHVVVAALVALAGSAQAAGVVGNPKDGASKAAMCIGCHGIQDYRAAYPEVYRVP
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCHHEECC
VLGGQNQQYLENALKAYRKKDRHFPSMNAIAGSLTDQDIADLAAYYAVQKADTKDNPYK
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNKFVGKHVVVAALVALAGSAQAAGVVGNPKDGASKAAMCIGCHGIQDYRAAYPEVYRVP
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCHHEECC
VLGGQNQQYLENALKAYRKKDRHFPSMNAIAGSLTDQDIADLAAYYAVQKADTKDNPYK
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA