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The map label for this gene is nodN [H]

Identifier: 78067026

GI number: 78067026

Start: 2655001

End: 2655477

Strand: Reverse

Name: nodN [H]

Synonym: Bcep18194_A5557

Alternate gene names: 78067026

Gene position: 2655477-2655001 (Counterclockwise)

Preceding gene: 78067027

Following gene: 78067023

Centisome position: 71.88

GC content: 65.41

Gene sequence:

>477_bases
ATGACCGACGTGACCTTGCCGCTGATCGCATCGGCACAGGCGCTGCAGGCGCGTGTTGGCGCAGAGCCGCTCGCGAGCGG
CTGGCTCTCGATCGACCAGCGTCGTGTCGATGGCTTTGCCGATGCGACCGACGATCATCAATGGATTCACGTCGATCCCG
AACGCGCGCGACGCGAGTCGCCGTTCGGTGGCCCGATCGCGCACGGGTTCCTGACGCTATCGCTGATTCCGGCGTTGATG
GCCGACGCGATGCGTTTCGAGCAGAAGATGGGCGTGAACTACGGACTGAACCGCGTGCGGTTCCTGAAGCCGGTGCCAGT
CGGCGCGCGCGTGCGGGCGCTGTTTGCGGTAAAGGAAACCGCCGAGGCCGCGCGGGACGGTGTGCAGGTGACGTGGTCGG
TGACGATGCAGGTCGAGCGTCCCGATGCGCCGCTGCCTGTTTGCGCGGCGGAATTCATCACGCTGCATTACTTCTGA

Upstream 100 bases:

>100_bases
TGTCGACGGAGTGGGTCGGCGTGAACAGCGCCGGCGAGACGGTGATCACCGTGCATACCAAGGTGATCTTCGGGCTGCGC
CATCCGGGAGGCAAGCAGGC

Downstream 100 bases:

>100_bases
AGCGGGGAGCGGCATGCACGGATGCCGCTCCGCTTTTCACATGCGCGTCAGTGCTTCGCGTATTGCGTCGCGCCGAACAG
CACCTCGCGCGCCTTGTCGT

Product: MaoC-like dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTDVTLPLIASAQALQARVGAEPLASGWLSIDQRRVDGFADATDDHQWIHVDPERARRESPFGGPIAHGFLTLSLIPALM
ADAMRFEQKMGVNYGLNRVRFLKPVPVGARVRALFAVKETAEAARDGVQVTWSVTMQVERPDAPLPVCAAEFITLHYF

Sequences:

>Translated_158_residues
MTDVTLPLIASAQALQARVGAEPLASGWLSIDQRRVDGFADATDDHQWIHVDPERARRESPFGGPIAHGFLTLSLIPALM
ADAMRFEQKMGVNYGLNRVRFLKPVPVGARVRALFAVKETAEAARDGVQVTWSVTMQVERPDAPLPVCAAEFITLHYF
>Mature_157_residues
TDVTLPLIASAQALQARVGAEPLASGWLSIDQRRVDGFADATDDHQWIHVDPERARRESPFGGPIAHGFLTLSLIPALMA
DAMRFEQKMGVNYGLNRVRFLKPVPVGARVRALFAVKETAEAARDGVQVTWSVTMQVERPDAPLPVCAAEFITLHYF

Specific function: Involved in the production of the root hair deformation (HAD) factor specifically on medicago [H]

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the R.meliloti counterpart [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 17396; Mature: 17265

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVTLPLIASAQALQARVGAEPLASGWLSIDQRRVDGFADATDDHQWIHVDPERARRES
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHCCC
PFGGPIAHGFLTLSLIPALMADAMRFEQKMGVNYGLNRVRFLKPVPVGARVRALFAVKET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH
AEAARDGVQVTWSVTMQVERPDAPLPVCAAEFITLHYF
HHHHHCCEEEEEEEEEEEECCCCCCCHHHHHHEEEECC
>Mature Secondary Structure 
TDVTLPLIASAQALQARVGAEPLASGWLSIDQRRVDGFADATDDHQWIHVDPERARRES
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHCCC
PFGGPIAHGFLTLSLIPALMADAMRFEQKMGVNYGLNRVRFLKPVPVGARVRALFAVKET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH
AEAARDGVQVTWSVTMQVERPDAPLPVCAAEFITLHYF
HHHHHCCEEEEEEEEEEEECCCCCCCHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3132583 [H]