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The map label for this gene is yaaA [C]

Identifier: 78067020

GI number: 78067020

Start: 2649788

End: 2650570

Strand: Reverse

Name: yaaA [C]

Synonym: Bcep18194_A5551

Alternate gene names: 78067020

Gene position: 2650570-2649788 (Counterclockwise)

Preceding gene: 78067023

Following gene: 78067019

Centisome position: 71.75

GC content: 62.2

Gene sequence:

>783_bases
ATGATAATCGTTCTCTCTCCAGCCAAATCCCTCGACTACGATACGCCCGCACATGTCCAGTCTTACACGAAGCCTGCATT
CGTCGACGACGCGTCCGAGTTGATCGACGGCCTGCGCAAGCTTTCGCCGCAGGACATCGCGACGCTGATGGATATCTCCG
ATCCGCTCGCGCGCCTGAATTTCCAGCGCTACGCGGACTGGTCGACGACCTTTACGCCGGCCAACGCGAAGCAGGCCGTG
CTCGCGTTCAACGGCGACGTATATGAAGGATTCGACGCCAAATCGCTGTCGTCCGCCGATCTCGACTATGCGCAACAGCA
CGTGCGCGTGCTGTCGGGCCTGTACGGGCTGTTGCGTCCGCTCGACCTGCTGCAGCCGTACCGGCTCGAGATGGGTACGC
GCTTCCCGACTGCGCGCGGCAAGGATCTGTACGCGTTCTGGGGCGACCGCATCACGCGGGCGCTGAACGAGCAGCTCGAA
ACGCGCAGCGGCGCGGCGCGTGTGCTGGTCAACTGCGCGTCGACCGAATATTTCAAGTCGGTCAAACCGAAACTGCTGGC
CGCGCCCGTCATCACGCCGGTATTCGAGGACTGGAAGGGCGGCCGCTACAAGATCATCAGCTTCCATGCGAAGCGTGCGC
GCGGCCTGATGGCGCGCTTTATCGTCGAGAACCGCATTACCGACCCGAAGGCGCTGAAGGATTTCGCGACGGAAGGCTAT
GCGTTCGATGCGGCCGCGTCGAACGATTCGACTTACGTATATCGCCGGCGAGTCGGCGAGTGA

Upstream 100 bases:

>100_bases
GCACGACGCGATGTGCGGCATGCGGGGCGAGAGAGCGGGTCATTCGTTACAATCGGTGGTTTTCGTCTGACCGCAAGGCA
CGGCGTGCCAGCGAGCCTCT

Downstream 100 bases:

>100_bases
CCCAGCCGGCCGTTCACGAGACGGCCGGCGCATGCATGAGGCCGGGCAAGCGCTACACCGCCTGTTCCGGTCGCCCAAGG
AGAGACAGATGGCCCTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MIIVLSPAKSLDYDTPAHVQSYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLNFQRYADWSTTFTPANAKQAV
LAFNGDVYEGFDAKSLSSADLDYAQQHVRVLSGLYGLLRPLDLLQPYRLEMGTRFPTARGKDLYAFWGDRITRALNEQLE
TRSGAARVLVNCASTEYFKSVKPKLLAAPVITPVFEDWKGGRYKIISFHAKRARGLMARFIVENRITDPKALKDFATEGY
AFDAAASNDSTYVYRRRVGE

Sequences:

>Translated_260_residues
MIIVLSPAKSLDYDTPAHVQSYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLNFQRYADWSTTFTPANAKQAV
LAFNGDVYEGFDAKSLSSADLDYAQQHVRVLSGLYGLLRPLDLLQPYRLEMGTRFPTARGKDLYAFWGDRITRALNEQLE
TRSGAARVLVNCASTEYFKSVKPKLLAAPVITPVFEDWKGGRYKIISFHAKRARGLMARFIVENRITDPKALKDFATEGY
AFDAAASNDSTYVYRRRVGE
>Mature_260_residues
MIIVLSPAKSLDYDTPAHVQSYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLNFQRYADWSTTFTPANAKQAV
LAFNGDVYEGFDAKSLSSADLDYAQQHVRVLSGLYGLLRPLDLLQPYRLEMGTRFPTARGKDLYAFWGDRITRALNEQLE
TRSGAARVLVNCASTEYFKSVKPKLLAAPVITPVFEDWKGGRYKIISFHAKRARGLMARFIVENRITDPKALKDFATEGY
AFDAAASNDSTYVYRRRVGE

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family [H]

Homologues:

Organism=Escherichia coli, GI1786187, Length=256, Percent_Identity=57.8125, Blast_Score=311, Evalue=4e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005583 [H]

Pfam domain/function: PF03883 DUF328 [H]

EC number: NA

Molecular weight: Translated: 29149; Mature: 29149

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVLSPAKSLDYDTPAHVQSYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLN
CEEEECCCCCCCCCCCHHHHHCCCCCHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
FQRYADWSTTFTPANAKQAVLAFNGDVYEGFDAKSLSSADLDYAQQHVRVLSGLYGLLRP
HHHHCCCCCEECCCCCCEEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDLLQPYRLEMGTRFPTARGKDLYAFWGDRITRALNEQLETRSGAARVLVNCASTEYFKS
HHHHCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEHHHHHHHHH
VKPKLLAAPVITPVFEDWKGGRYKIISFHAKRARGLMARFIVENRITDPKALKDFATEGY
CCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCE
AFDAAASNDSTYVYRRRVGE
EEECCCCCCCEEEHHCCCCC
>Mature Secondary Structure
MIIVLSPAKSLDYDTPAHVQSYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLN
CEEEECCCCCCCCCCCHHHHHCCCCCHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
FQRYADWSTTFTPANAKQAVLAFNGDVYEGFDAKSLSSADLDYAQQHVRVLSGLYGLLRP
HHHHCCCCCEECCCCCCEEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDLLQPYRLEMGTRFPTARGKDLYAFWGDRITRALNEQLETRSGAARVLVNCASTEYFKS
HHHHCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEHHHHHHHHH
VKPKLLAAPVITPVFEDWKGGRYKIISFHAKRARGLMARFIVENRITDPKALKDFATEGY
CCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCE
AFDAAASNDSTYVYRRRVGE
EEECCCCCCCEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA