| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78067019
Identifier: 78067019
GI number: 78067019
Start: 2648545
End: 2649699
Strand: Reverse
Name: 78067019
Synonym: Bcep18194_A5550
Alternate gene names: NA
Gene position: 2649699-2648545 (Counterclockwise)
Preceding gene: 78067020
Following gene: 78067014
Centisome position: 71.73
GC content: 63.81
Gene sequence:
>1155_bases ATGGCCCTTTCGATCACCAGCAATTTCGACGCAGGCGCAATCGACGTCGTGTCCTGCGACAGTCCCGACGCGATTCGGCT GCGCGTGCGCGGCGACACCCGCTCGGAATTTGCGCAATGGTTTTACTACCGTTTGACGGGCGCGCGCGGCGAGCGCTGCG TGATGACGTTCGAGAATGCTGCCGAATGTGCGTATCCGTCGGGCTGGCGCAATTACAGCGCGGTGGCGAGCTATGACCGG GTCGACTGGTTCCGCGTGCCGACGACGTTCGACGGCAAGACGATGACCATCGATCACACGCCGGAATTCGACAGCATCTA CTACGCGTATTTCGAACCGTACTCGGAAGAGCGTCACGCGGCGTTTCTCGGCGCGGTCCAGCAGTTGCCGCAGGCGAGCG TCGTCGAACTCGGCCGCACGGTCGAAGGTCGCCCGATGTCGCTGCTGACGCTCGGTACGCCGGAAACCGACGGCACGCCG AAGAAGAAGGTGTGGATCATCGCGCGCCAGCATCCTGGCGAGTCGATGGCCGAATGGTTCGTCGAAGGCCTCGTCAAGCG GCTGGCCGGATGGGGCGACTGGGCCGGCGATCCGGTCGCGCGCAAGCTGTACGATCGTGCGACGTTCCATATCGTCCCGA ACATGAACCCGGACGGCAGCGTGCATGGCAACCTGCGCACCAATGCGGCAGGTGCGAACCTGAATCGCGAGTGGATGGCG CCCGATGCCGAGCGCAGTCCCGAGGTGCTGGCCGTGCGCGATGCAATCCATGCGATCGGCTGCGACATGTTCTTCGACAT TCACGGCGACGAGGATCTGCCGTACGTGTTCGTTGCCGGGTCCGAGATGCTGCCGAGCTTCACCGAGCAGCAGGGCAAGG AGCAGACCGCGTTCATCGACGCGTTCAAGGTCGCGAGCCCTGACTTCCAGACTGAGCATGGCTATGCCGCGAGCAAGTAC AAGGAGGACGCGCTCAAGCTCGCGTCGAAGTACATCGGCCACCAGTTCGGCTGTTTGTCGCTGACGCTCGAGATGCCGTT CAAGGACAACGCGAACCTGCCCGACGAACGAGTCGGCTGGAACGGCGAGCGCAGCGCGGCGCTTGGCGCGGCGATGCTGG CGGCGATCCTGGTGCACGTCGACACGTTCGCTTAA
Upstream 100 bases:
>100_bases GTCGGCGAGTGACCCAGCCGGCCGTTCACGAGACGGCCGGCGCATGCATGAGGCCGGGCAAGCGCTACACCGCCTGTTCC GGTCGCCCAAGGAGAGACAG
Downstream 100 bases:
>100_bases GCGTAGCGTCGCTACATGAAAAAAGCCGGGGCATCTCAGGATGCCCCGGCTTTTTCGCTTCTGTCGGTGTCGCTTCGCCG TATCAGGACTTCTTCGCGGT
Product: peptidase M14, carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MALSITSNFDAGAIDVVSCDSPDAIRLRVRGDTRSEFAQWFYYRLTGARGERCVMTFENAAECAYPSGWRNYSAVASYDR VDWFRVPTTFDGKTMTIDHTPEFDSIYYAYFEPYSEERHAAFLGAVQQLPQASVVELGRTVEGRPMSLLTLGTPETDGTP KKKVWIIARQHPGESMAEWFVEGLVKRLAGWGDWAGDPVARKLYDRATFHIVPNMNPDGSVHGNLRTNAAGANLNREWMA PDAERSPEVLAVRDAIHAIGCDMFFDIHGDEDLPYVFVAGSEMLPSFTEQQGKEQTAFIDAFKVASPDFQTEHGYAASKY KEDALKLASKYIGHQFGCLSLTLEMPFKDNANLPDERVGWNGERSAALGAAMLAAILVHVDTFA
Sequences:
>Translated_384_residues MALSITSNFDAGAIDVVSCDSPDAIRLRVRGDTRSEFAQWFYYRLTGARGERCVMTFENAAECAYPSGWRNYSAVASYDR VDWFRVPTTFDGKTMTIDHTPEFDSIYYAYFEPYSEERHAAFLGAVQQLPQASVVELGRTVEGRPMSLLTLGTPETDGTP KKKVWIIARQHPGESMAEWFVEGLVKRLAGWGDWAGDPVARKLYDRATFHIVPNMNPDGSVHGNLRTNAAGANLNREWMA PDAERSPEVLAVRDAIHAIGCDMFFDIHGDEDLPYVFVAGSEMLPSFTEQQGKEQTAFIDAFKVASPDFQTEHGYAASKY KEDALKLASKYIGHQFGCLSLTLEMPFKDNANLPDERVGWNGERSAALGAAMLAAILVHVDTFA >Mature_383_residues ALSITSNFDAGAIDVVSCDSPDAIRLRVRGDTRSEFAQWFYYRLTGARGERCVMTFENAAECAYPSGWRNYSAVASYDRV DWFRVPTTFDGKTMTIDHTPEFDSIYYAYFEPYSEERHAAFLGAVQQLPQASVVELGRTVEGRPMSLLTLGTPETDGTPK KKVWIIARQHPGESMAEWFVEGLVKRLAGWGDWAGDPVARKLYDRATFHIVPNMNPDGSVHGNLRTNAAGANLNREWMAP DAERSPEVLAVRDAIHAIGCDMFFDIHGDEDLPYVFVAGSEMLPSFTEQQGKEQTAFIDAFKVASPDFQTEHGYAASKYK EDALKLASKYIGHQFGCLSLTLEMPFKDNANLPDERVGWNGERSAALGAAMLAAILVHVDTFA
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190194403, Length=371, Percent_Identity=25.8760107816712, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI222352158, Length=318, Percent_Identity=25.1572327044025, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI120444924, Length=309, Percent_Identity=26.537216828479, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI31657119, Length=312, Percent_Identity=26.9230769230769, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI170763513, Length=333, Percent_Identity=24.3243243243243, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI115533904, Length=364, Percent_Identity=25.2747252747253, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI193202888, Length=323, Percent_Identity=23.5294117647059, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28571179, Length=323, Percent_Identity=26.625386996904, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24641847, Length=322, Percent_Identity=26.7080745341615, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI161077807, Length=323, Percent_Identity=26.625386996904, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24641845, Length=323, Percent_Identity=26.625386996904, Blast_Score=99, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 42683; Mature: 42552
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSITSNFDAGAIDVVSCDSPDAIRLRVRGDTRSEFAQWFYYRLTGARGERCVMTFENA CEEEEECCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHEEECCCCCEEEEEECCC AECAYPSGWRNYSAVASYDRVDWFRVPTTFDGKTMTIDHTPEFDSIYYAYFEPYSEERHA CCCCCCCCCCCCHHHHCCCCCEEEECCCEECCCEEEECCCCCCCCEEEEEECCCCCCHHH AFLGAVQQLPQASVVELGRTVEGRPMSLLTLGTPETDGTPKKKVWIIARQHPGESMAEWF HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHH VEGLVKRLAGWGDWAGDPVARKLYDRATFHIVPNMNPDGSVHGNLRTNAAGANLNREWMA HHHHHHHHCCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCEECCEEECCCCCCCCCCCCC PDAERSPEVLAVRDAIHAIGCDMFFDIHGDEDLPYVFVAGSEMLPSFTEQQGKEQTAFID CCCCCCCCEEEHHHHHHHHCCEEEEEECCCCCCCEEEEECCHHCCCHHHHCCCCHHHHHH AFKVASPDFQTEHGYAASKYKEDALKLASKYIGHQFGCLSLTLEMPFKDNANLPDERVGW HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCC NGERSAALGAAMLAAILVHVDTFA CCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALSITSNFDAGAIDVVSCDSPDAIRLRVRGDTRSEFAQWFYYRLTGARGERCVMTFENA EEEEECCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHEEECCCCCEEEEEECCC AECAYPSGWRNYSAVASYDRVDWFRVPTTFDGKTMTIDHTPEFDSIYYAYFEPYSEERHA CCCCCCCCCCCCHHHHCCCCCEEEECCCEECCCEEEECCCCCCCCEEEEEECCCCCCHHH AFLGAVQQLPQASVVELGRTVEGRPMSLLTLGTPETDGTPKKKVWIIARQHPGESMAEWF HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHH VEGLVKRLAGWGDWAGDPVARKLYDRATFHIVPNMNPDGSVHGNLRTNAAGANLNREWMA HHHHHHHHCCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCEECCEEECCCCCCCCCCCCC PDAERSPEVLAVRDAIHAIGCDMFFDIHGDEDLPYVFVAGSEMLPSFTEQQGKEQTAFID CCCCCCCCEEEHHHHHHHHCCEEEEEECCCCCCCEEEEECCHHCCCHHHHCCCCHHHHHH AFKVASPDFQTEHGYAASKYKEDALKLASKYIGHQFGCLSLTLEMPFKDNANLPDERVGW HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCC NGERSAALGAAMLAAILVHVDTFA CCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8320209 [H]