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The map label for this gene is 78066977

Identifier: 78066977

GI number: 78066977

Start: 2597366

End: 2598703

Strand: Reverse

Name: 78066977

Synonym: Bcep18194_A5508

Alternate gene names: NA

Gene position: 2598703-2597366 (Counterclockwise)

Preceding gene: 78066978

Following gene: 78066976

Centisome position: 70.35

GC content: 60.46

Gene sequence:

>1338_bases
ATGTACCGCTTCACTCTTGTCAGGCACGTCGGATTCGTTGTGAGTGCGGCGGCGGTAATCCTGTCGGCCTTGCCGGTGCG
GGCGGAGGCGAGCGCTATATCGGCGCAAACTGCCGTAGGTGCGTCTGACGCGCCCTTCGTTGCGCAGGTTGTGGGGCTGG
AATGGCTTAATCCGCTGCAGCGTCGAGATTATCCGACCGAGTGGCAATTGCTGTGGACGCTCGGATTGGTCAAGCCGAAC
AGCAACGACGATATGGTGCGGACCAAACCCGCGAAATACACGACCTTGCAACCGATATCCATCGTTGCAGATGGTAATCG
GGGCAGTGAGTCGTTTTCCGGGTTCTATGAAAAGTATGTCGACAAACTCCTGGTGCTGTTTCGCACACGCTATTTTTTGA
ACGGCGACTACTTCTATACCGTCAGCCCGCGCTGGCGGTGGAACTGGCGAGAGCTGGCCGGCATTCATGTCGAGTTGGCT
GTTCCCAGCGATCGGTTGAACCCTGAACTGGCAGCGGCTTATTTGCAGGATCGCGCTGTCACCATCTTCGAAATCGGCAA
CCCGTCTGCAAAAAATCTATGGAGCCGCGATACGCCGCCCGATGTGCACGTGACGTCAGGTCAAGGAAACGCCGGTTTCA
CGTCGCTGAACGCTGCACTGGACTATCTGGCCGTACACCCCGACAAAAGCGTCTGGGTGATGAACTGGGACGCGCCAAGC
TTTCCGCCGCAGGACGAACAGATCAACGAGAACATGGTGCTGCTGTTCCTCGCCGGCCCGAATTTGAAGACCGAGCGCGA
ACCGCTGGCGTGGATCGGCAAGGCTGCACGAAGCAACGTCGACGATTTCGAGGCGAAGCAAGGCGCGAGCCGCGTGGTGC
GGGCATGGGCATCGACGATCGACGCAGCGGCGAGCAATGCCGGCGTCACGGTCTCGTCACTGAACTACGTCATTCACGAC
GCAGGCAAGGGCAGCGATGCTGCGTCGGCAAGGGCCGCCGCGCTATCGCAATCACTGACCGAAGTGCTGCCGGAATACGA
CCTCCACGCACAGACCTTCAATACGTCGGCATTGCTCGGTGACATGGGTGCCGGCGCGGCGTTGACCGATGTCGCGTTGG
CGATCGGCCGAGCGAAGCACCTCGGCGGAAACGTGCTCGTGGCGGGAACGACCGACACCGAGCATCCGACGGCAGTGGTG
GTGGTCGCACCGTCGAAGCTGACACCGATCGACACCAGCAAGAACTGGTTCCGCGCGCGCGGTGGAAACAACGCGTACTT
GCCGTGGTGGGGCCGTCGTCATGATGCAGGTCCGACGTCGCAGGGCTATTCGGAGTAG

Upstream 100 bases:

>100_bases
TCATCATTGGGAATGGAGTTGGGGTTCCGGTTTCGACCGGGCTCCGATGCGGGCTGGTCGGCGTTCAACGGGTTATCGAC
CGACTAGGTCAGGAATACTC

Downstream 100 bases:

>100_bases
AACCCGCCACAGGACGATTGCGGGAGAGAGAACATCGCAAGCCTGCATGACGGGCTTTGACACATTCACCGCCGCGTGAT
GCGTCGCGACAATGGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Virulence Factor Pectin Lyase Fold

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MYRFTLVRHVGFVVSAAAVILSALPVRAEASAISAQTAVGASDAPFVAQVVGLEWLNPLQRRDYPTEWQLLWTLGLVKPN
SNDDMVRTKPAKYTTLQPISIVADGNRGSESFSGFYEKYVDKLLVLFRTRYFLNGDYFYTVSPRWRWNWRELAGIHVELA
VPSDRLNPELAAAYLQDRAVTIFEIGNPSAKNLWSRDTPPDVHVTSGQGNAGFTSLNAALDYLAVHPDKSVWVMNWDAPS
FPPQDEQINENMVLLFLAGPNLKTEREPLAWIGKAARSNVDDFEAKQGASRVVRAWASTIDAAASNAGVTVSSLNYVIHD
AGKGSDAASARAAALSQSLTEVLPEYDLHAQTFNTSALLGDMGAGAALTDVALAIGRAKHLGGNVLVAGTTDTEHPTAVV
VVAPSKLTPIDTSKNWFRARGGNNAYLPWWGRRHDAGPTSQGYSE

Sequences:

>Translated_445_residues
MYRFTLVRHVGFVVSAAAVILSALPVRAEASAISAQTAVGASDAPFVAQVVGLEWLNPLQRRDYPTEWQLLWTLGLVKPN
SNDDMVRTKPAKYTTLQPISIVADGNRGSESFSGFYEKYVDKLLVLFRTRYFLNGDYFYTVSPRWRWNWRELAGIHVELA
VPSDRLNPELAAAYLQDRAVTIFEIGNPSAKNLWSRDTPPDVHVTSGQGNAGFTSLNAALDYLAVHPDKSVWVMNWDAPS
FPPQDEQINENMVLLFLAGPNLKTEREPLAWIGKAARSNVDDFEAKQGASRVVRAWASTIDAAASNAGVTVSSLNYVIHD
AGKGSDAASARAAALSQSLTEVLPEYDLHAQTFNTSALLGDMGAGAALTDVALAIGRAKHLGGNVLVAGTTDTEHPTAVV
VVAPSKLTPIDTSKNWFRARGGNNAYLPWWGRRHDAGPTSQGYSE
>Mature_445_residues
MYRFTLVRHVGFVVSAAAVILSALPVRAEASAISAQTAVGASDAPFVAQVVGLEWLNPLQRRDYPTEWQLLWTLGLVKPN
SNDDMVRTKPAKYTTLQPISIVADGNRGSESFSGFYEKYVDKLLVLFRTRYFLNGDYFYTVSPRWRWNWRELAGIHVELA
VPSDRLNPELAAAYLQDRAVTIFEIGNPSAKNLWSRDTPPDVHVTSGQGNAGFTSLNAALDYLAVHPDKSVWVMNWDAPS
FPPQDEQINENMVLLFLAGPNLKTEREPLAWIGKAARSNVDDFEAKQGASRVVRAWASTIDAAASNAGVTVSSLNYVIHD
AGKGSDAASARAAALSQSLTEVLPEYDLHAQTFNTSALLGDMGAGAALTDVALAIGRAKHLGGNVLVAGTTDTEHPTAVV
VVAPSKLTPIDTSKNWFRARGGNNAYLPWWGRRHDAGPTSQGYSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48397; Mature: 48397

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRFTLVRHVGFVVSAAAVILSALPVRAEASAISAQTAVGASDAPFVAQVVGLEWLNPLQ
CCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHH
RRDYPTEWQLLWTLGLVKPNSNDDMVRTKPAKYTTLQPISIVADGNRGSESFSGFYEKYV
HCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEECCEEEEECCCCCCHHHHHHHHHHH
DKLLVLFRTRYFLNGDYFYTVSPRWRWNWRELAGIHVELAVPSDRLNPELAAAYLQDRAV
HHHHHHHHHHHEECCCEEEEECCCCCCCHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCE
TIFEIGNPSAKNLWSRDTPPDVHVTSGQGNAGFTSLNAALDYLAVHPDKSVWVMNWDAPS
EEEECCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHEEEECCCCEEEEEECCCCC
FPPQDEQINENMVLLFLAGPNLKTEREPLAWIGKAARSNVDDFEAKQGASRVVRAWASTI
CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DAAASNAGVTVSSLNYVIHDAGKGSDAASARAAALSQSLTEVLPEYDLHAQTFNTSALLG
HHHCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHC
DMGAGAALTDVALAIGRAKHLGGNVLVAGTTDTEHPTAVVVVAPSKLTPIDTSKNWFRAR
CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEC
GGNNAYLPWWGRRHDAGPTSQGYSE
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYRFTLVRHVGFVVSAAAVILSALPVRAEASAISAQTAVGASDAPFVAQVVGLEWLNPLQ
CCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHH
RRDYPTEWQLLWTLGLVKPNSNDDMVRTKPAKYTTLQPISIVADGNRGSESFSGFYEKYV
HCCCCCCEEEEEEEEEECCCCCCCCEEECCCCEEEECCEEEEECCCCCCHHHHHHHHHHH
DKLLVLFRTRYFLNGDYFYTVSPRWRWNWRELAGIHVELAVPSDRLNPELAAAYLQDRAV
HHHHHHHHHHHEECCCEEEEECCCCCCCHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCE
TIFEIGNPSAKNLWSRDTPPDVHVTSGQGNAGFTSLNAALDYLAVHPDKSVWVMNWDAPS
EEEECCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHEEEECCCCEEEEEECCCCC
FPPQDEQINENMVLLFLAGPNLKTEREPLAWIGKAARSNVDDFEAKQGASRVVRAWASTI
CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DAAASNAGVTVSSLNYVIHDAGKGSDAASARAAALSQSLTEVLPEYDLHAQTFNTSALLG
HHHCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHC
DMGAGAALTDVALAIGRAKHLGGNVLVAGTTDTEHPTAVVVVAPSKLTPIDTSKNWFRAR
CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEC
GGNNAYLPWWGRRHDAGPTSQGYSE
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA