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The map label for this gene is ycbR [H]

Identifier: 78066975

GI number: 78066975

Start: 2595072

End: 2595818

Strand: Reverse

Name: ycbR [H]

Synonym: Bcep18194_A5506

Alternate gene names: 78066975

Gene position: 2595818-2595072 (Counterclockwise)

Preceding gene: 78066976

Following gene: 78066974

Centisome position: 70.27

GC content: 65.06

Gene sequence:

>747_bases
ATGATTACGCTTGAGAAACGCGCGGCGAAGGTCGCGATCGTCCTCGAAAAACGCCAGATCCTGAAGCCGCCCGTCGTGCG
CGTGGGCGCGGCGCTCGACATCTCCGGCTCCGCGAAGCCGCTGTACCAGTCGGGCGTGATCCAGGAGACGCATGACCGGA
TCCTCGGCATTGCACTGAAGTTCGACGACAACGGCGAAGTCGACACGTGGACCTTCACCGAAGGCTACGACCGCCTGCCG
ACCGCCACGCCGGACAACTACGGCTCGTACATTTCCGACCACGTGCTCGAGGCGCGGATCGACAAGTGGGGCGGCACGCA
GTACGCGCCGGTAATGAACGACATCGTCGACTTCTTCTTCCGCGCGCCGGAGCCGTCGCCGAAGCGCGAAGAGAAGCGCG
GCTTCCTGAGCCGGCTGTTCGGCGGGGCGGACGAGACGCCCGCGCCGGCCGCTTCCGCGCCGGTGAACGGCCATCTGCCC
GCATGGGTGCTGTTCGTCACCGACGGCCAGAACCCGAAGAACGACCGCAAGCGCGTGCGCCAGTTGCTGGCCGAGTCGCA
GCACTACCCGCTGTACTGGTCGCTCGTCGGCGTCGGCGATCCGAGCGAATTCGGCTTCCTCGCGGAAGTCGCGGACGAGA
TGCCGAACGTCGGCTTCCTGCATCTCGAATCGCTCGACCTCAGCGACGAACAGATCTACGAACAGCTGATCACGCAGGAA
TTCTGCGAATGGGTGCGCGCGAAGTAA

Upstream 100 bases:

>100_bases
GCCAGCGCGAGCAGGACGCGCCGCGCCTGCGCCAGCTCGAACAGGACCTGATCACCCGATTCGCTCCGAAGCACAACTGA
GAGAACTGAGAGAACACCGC

Downstream 100 bases:

>100_bases
GCGCAGCCCGTACGCCTTTTATCCAGAACTCGAATACCCCCATCATGTTGAAAGACTTCAAGATCCCGTTGTCGCTCACG
GTGCTCGCGCTCGTCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF17 [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MITLEKRAAKVAIVLEKRQILKPPVVRVGAALDISGSAKPLYQSGVIQETHDRILGIALKFDDNGEVDTWTFTEGYDRLP
TATPDNYGSYISDHVLEARIDKWGGTQYAPVMNDIVDFFFRAPEPSPKREEKRGFLSRLFGGADETPAPAASAPVNGHLP
AWVLFVTDGQNPKNDRKRVRQLLAESQHYPLYWSLVGVGDPSEFGFLAEVADEMPNVGFLHLESLDLSDEQIYEQLITQE
FCEWVRAK

Sequences:

>Translated_248_residues
MITLEKRAAKVAIVLEKRQILKPPVVRVGAALDISGSAKPLYQSGVIQETHDRILGIALKFDDNGEVDTWTFTEGYDRLP
TATPDNYGSYISDHVLEARIDKWGGTQYAPVMNDIVDFFFRAPEPSPKREEKRGFLSRLFGGADETPAPAASAPVNGHLP
AWVLFVTDGQNPKNDRKRVRQLLAESQHYPLYWSLVGVGDPSEFGFLAEVADEMPNVGFLHLESLDLSDEQIYEQLITQE
FCEWVRAK
>Mature_248_residues
MITLEKRAAKVAIVLEKRQILKPPVVRVGAALDISGSAKPLYQSGVIQETHDRILGIALKFDDNGEVDTWTFTEGYDRLP
TATPDNYGSYISDHVLEARIDKWGGTQYAPVMNDIVDFFFRAPEPSPKREEKRGFLSRLFGGADETPAPAASAPVNGHLP
AWVLFVTDGQNPKNDRKRVRQLLAESQHYPLYWSLVGVGDPSEFGFLAEVADEMPNVGFLHLESLDLSDEQIYEQLITQE
FCEWVRAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27792; Mature: 27792

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLEKRAAKVAIVLEKRQILKPPVVRVGAALDISGSAKPLYQSGVIQETHDRILGIALK
CCCCCCHHCEEEEEEECHHHCCCCHHHCCCEEECCCCCCCHHHCCCHHHHCCCEEEEEEE
FDDNGEVDTWTFTEGYDRLPTATPDNYGSYISDHVLEARIDKWGGTQYAPVMNDIVDFFF
ECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RAPEPSPKREEKRGFLSRLFGGADETPAPAASAPVNGHLPAWVLFVTDGQNPKNDRKRVR
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
QLLAESQHYPLYWSLVGVGDPSEFGFLAEVADEMPNVGFLHLESLDLSDEQIYEQLITQE
HHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
FCEWVRAK
HHHHHHCC
>Mature Secondary Structure
MITLEKRAAKVAIVLEKRQILKPPVVRVGAALDISGSAKPLYQSGVIQETHDRILGIALK
CCCCCCHHCEEEEEEECHHHCCCCHHHCCCEEECCCCCCCHHHCCCHHHHCCCEEEEEEE
FDDNGEVDTWTFTEGYDRLPTATPDNYGSYISDHVLEARIDKWGGTQYAPVMNDIVDFFF
ECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RAPEPSPKREEKRGFLSRLFGGADETPAPAASAPVNGHLPAWVLFVTDGQNPKNDRKRVR
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
QLLAESQHYPLYWSLVGVGDPSEFGFLAEVADEMPNVGFLHLESLDLSDEQIYEQLITQE
HHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
FCEWVRAK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377; 8760916 [H]