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The map label for this gene is hrpA [H]

Identifier: 78066933

GI number: 78066933

Start: 2543577

End: 2547785

Strand: Reverse

Name: hrpA [H]

Synonym: Bcep18194_A5464

Alternate gene names: 78066933

Gene position: 2547785-2543577 (Counterclockwise)

Preceding gene: 78066936

Following gene: 78066932

Centisome position: 68.97

GC content: 69.57

Gene sequence:

>4209_bases
ATGTCGAATGTTTCTAAAAGTCCCGCGCCGACGCGGGCCAATACGCCGTCGGCCCGGCACCCGGATGGTGCGGCCGATGC
ACGCGAGCAGCAGGGCCAGCCACCTCGCCAGCAGCAGGACAAGCCGGCGGGCACGCCGGCACACGCGCCGCGCGGGCCGC
GCGGCGACGAACGGCGCAGCGATGCGCGCCAGCCGGCCGCAAAGGGCGCACCGCAGGCAACGGGCGAGCGTCCGCCGCGC
CGCGAGCGTCCGCCGCGCGCGGTCGTCGCGCCGAACCCGGTCCCGCCGATCACGTACCCCGAAAGCCTGCCCGTGTCGGG
CAAGCGCGACGAAATCGCGCGCGCGATCGCCGGTCATCAGGTTGTCATCGTCTGCGGCGAAACCGGCTCGGGCAAGACCA
CGCAGTTGCCGAAGATCTGTCTCGATCTCGGCCGCGGCCTCGGCGCCGGCGGCACGGGCCTGATCGGCCATACGCAGCCG
CGCCGCCTCGCCGCGTCGTCCACCGGTCGCCGGATCGCCGAGGAACTCGGCACGCCGTTCGGCGAAGTGGTCGGCTACAA
GGTGCGCTTCACCGACAATCTCGCGCCGGGCGCGTCCGTGAAGCTGATGACGGACGGGATCCTGCTCGCCGAGACGCAGA
CCGACCCGCTGCTGAAGGCGTACGACACGCTGATCATCGACGAGGCGCACGAGCGCAGCCTGAACATCGACTTCCTGCTC
GGCTACCTGAAGGAAATCCTGCCGAGGCGGCCGGACCTGAAGCTGATCGTCACGTCCGCGACGATCGACGCCGATCGCTT
CGCGCGCCATTTCGGCTCCGACGAGCGCCCCGCGCCCGTGATCGAGGTGAGCGGGCGGCTGTATCCGGTCGAGATGCGCT
ACCGGCCCGTGGCGGAGGATCGCCCGGCCGTGAAGAACGCCGAAGGCACGGGCGGCCGCGACCGCGTGAAGACCGCGCGC
GAAGCCGAGCGCGACCTGATGGACGCGATCGTCGACGCAGTCGACGAGCTGTGCCGCGAAGGCCCCGGCGACGTGCTGGT
GTTCCTGCCCGGCGAGCGCGAGATCCGCGAAGCGGCCGAGGCGCTGCGCAAGCACCACCCGCCGCATACCGAGATCCTGC
CGCTGTTCGCGCGGCTCTCGGCGGCCGACCAGGACAAGGTGTTCAAGGCGTCGAATGCGCGCCGGATCGTGCTCGCGACC
AACGTGGCCGAAACCTCGCTGACGGTGCCGGGCATCCGCTACGTCGTCGATACCGGCCTCGCGCGCGTGAAGCGCTATTC
GTACCGGAACAAGGTCGAGCAGCTGCAGGTCGAGTCGATCTCGCAGGCGGCCGCGAACCAGCGCGCGGGCCGTTGCGGCC
GCGTGGCCGATGGCGTCTGCATCCGCTTGTACGAGGAAAGCGACTATCAGGCGCGCGCGCGCTTCACCGATCCGGAAATC
CTGCGCTCGTCGCTCGCGTCGGTGATTCTGCGGATGAAATCGCTGCACCTGACGGCGATCGAATCGTTCCCGTTCCTCGA
GCCGCCGCCCGGCCGCGCGATCGCGGACGGCTACCAGCTGCTCAACGAGCTTGGCGCGGTCGACGACGACAACGCGCTGA
CGCCGCTCGGCCGCGAACTCGCGCGGCTGCCGCTCGACCCGCGCGTCGGCCGGATGATTCTCGCCGCGCGCGACCAGCAG
TCGCTGCGCGAGGTGCTGATCATCGCGAGCGCGCTGTCCGTGCAGGATCCGCGCGACCGCCCGATCGAAGCGCAGGAGCA
GGCCGACCAGGCGCACCGCCGGTTTGCCGACGAGCGTTCCGAATTCCTGCAGTGGCTGAAGATCTGGGCGTGGTTCGAAG
AGGCCGTCGCGCACAAGAAGTCGAACCGCCAGCTGATCGATGCGTGCCGGCAGAACTTCCTGTCGCACCTGCGGCTGCGC
GAGTGGCGCGACGTCCATTCGCAACTGCTGACGGTTGTGCGCGAGCACGGCTGGCGGCTGAACGAAGTCGAGGCGACCTA
CGAACAGATCCATCTGGCCCTGTTGACCGGCCTGCTCGGCAACCTCGGCCTGAAGGCCGACGACGATCCGCACTATCTCG
GCGCGCGCGGGATCAAGTTCTACCTGTGGCCAGGCTCCGTGCTCGCGAAGAAGGCCGGCCGCTGGGTGATGGCGGCCGAG
CTCGTCGAGACGAGCCGGCTGTATGCGCGCTGCCTCGCGAAGATCGAGCCCGAATGGGTCGAGAAGGTCGGCGCGCACCT
GCTGAAGAAGTCACTGTCGGAGCCGCACTGGGAAAAGCGCCCGGCGCAGGTCAGCGCATACGAGCGCGCGACGCTGTACG
GGCTGCCGATCTACCACCGCCGGCGCGTCGCGTTCGGCAAGCAGGATCCGTCGCGGGCGCGCGAGCTGTTCATCCGCGGC
GCGCTGGTCGAGGGCGAGTTCGACACGAAGCTCGCGTTCTTCGCGCACAACCGCAAGCTGCTCGCCGACATCGAGCAGCT
CGAGCACAAGTCGCGCCGGCAGGACGTGCTGGTCGACGACGAGCTGATCTACGCGTACTACGACCAGGCGATTCCGGAAG
GCATTCACACGGGCGCCGCGTTCGAGCGCTGGTATCGCGACGAAGTGAAGAAGGGCGGCCAGCCCGAGGACAAGCTGCGG
CTGCTGTATCTGTCGCGCGACGACCTGATGCGCCACGAGGCGGCCGGCGTGACGACCGAGCTGTTCCCGAAGCGCGCGAC
GATGGCCGGCGTCGAGATGGCGCTCACGTATCACTTCGAGCCCGGCACGCCGCGCGACGGCGTGACGCTCGCGGTGCCGC
TGTATGCGCTGAACCAGGTCGACGCGCGCCGCTGCGAGTGGCTCGTGCCGGGGATGCTGAAGGAAAAGGTGCAGTTGCTG
CTGAAGTCGTTGCCGCAGAAGCTGCGCCGGCATTGCGTGCCGCTGCCCGAGTACGCGGCCGGCTTCGTCGAGCGGATGGG
CCGCGAGCGCTTCGGCGCGGGCGGGCTCGTCGAGGCGCTGATCGCCGACGTGCGTGGTGAAACGCAAATCGCGATGAAAA
CGGCCGACTTCAAGCTCGAGACGCTGCCCGCGCACCTGTTCATGAATTTCAAGGTGATCGACGAGCACGGCCGCCAGCTC
GCGATGGGGCGCAATCTCGCGCAGCTTCGCCAGGAGCTGGGGGCGCAGGCGCAGCAGCAGTTCCAGAAGATCGCGGCGGC
GTCGACGATCGCCGCGGGCGGCGATGCCGATGACGGCCAGCCCATCGGCCAGGCGCCGGCGACGGCTGCCACGACCGGTG
CCGCCGGCCGCAACGCGAAGGCCGGCAAGGGCGCGGCGCCGCAGACGGCCGCTCCGGCGGAAGCCGGCGCGACCGCGCTG
TACGAGAACCTGACGACGTGGAATTTCGGCAAGCTGCCCGAGCTGCTGGAGATCCGCCGGCGCGGCCAGACGCTGTACGG
CTACCCGGCACTCGTCGATCGCGGCACGCATTGCGACGTCGAAGTGTTCGATTCGCCGGAGGAGGCCGCGCGCATCCACC
GGGCCGGCCTGCGGCGGCTGTTCGCGCTGCAGCTGAAGGAGCCGATCAAGTTCCTCGAGAAGAACCTGCCGGGCCTGCGC
GAGATGGCGATGCAGTACATGTCGCTCGGCACGCAGGACGAGCTGCGCGACCAGCTGATCGACACGGCGCTCGACCGCGC
GTGCCTGCAGGACCCGCTGCCCGACGACGACGCAAGCTTCCACGCGCGCCGCGACGAGGGCCGGAGCCGCCTGAACCTGC
TCGCGCAGGAAATCGCGCGGCTGGTCGGGCAGATCCTGGCCGAATACGCGGGGCTCGTGAAGAAGCTCGCGCAGGCGAAG
CCGTTCGCGCAGGCCCACGCGGACCTGCAGCAGCAGCTCGGCGCGCTGGTCGGCAAGCGCTTCGTGATCGATACGCCGTA
CGCGCAACTGGCGCACTTCCCGCGCTACCTGAAGGGCATCGCGCTGCGGATCGACAAGCTGAAGGCCGATCCGGCGCGCG
ACGCGAAGCAGTCGGCCGACCTGCTGCCGCTCGCCCAGCAGTACCAGCGCGCGGTGTCGCAGCGCGGCGGCGTCGCCGAT
TCGCGGCTCGCGGAATTCCGCTGGCTGCTCGAGGAACTGCGGATTTCGCTGTTCGCGCAGGAACTGCGCACGCCGATGCC
TGTCTCTGTCAAGCGTCTGCACAAGGTCTGGGAGTCGATGCAGCGCTAG

Upstream 100 bases:

>100_bases
CTGGCGGCCGAGTCGTCGGCAGCCGGCGGCGTCGTGGCGCCGGTCTGGGCGGGGGGGAGGTCGGTTTGGGAATTCATGGG
CGGGATTATAATGCGCCCCC

Downstream 100 bases:

>100_bases
CGCAACATCGGTTTCCCGGGCTCGCACCGGCGGCCGGCCCCGGCCGGCCGCGCGGCGCCTGCCGCGCCGGCCGACCGGGC
CGCCGCGGCGTGCGTCGAAG

Product: ATP-dependent helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1402; Mature: 1401

Protein sequence:

>1402_residues
MSNVSKSPAPTRANTPSARHPDGAADAREQQGQPPRQQQDKPAGTPAHAPRGPRGDERRSDARQPAAKGAPQATGERPPR
RERPPRAVVAPNPVPPITYPESLPVSGKRDEIARAIAGHQVVIVCGETGSGKTTQLPKICLDLGRGLGAGGTGLIGHTQP
RRLAASSTGRRIAEELGTPFGEVVGYKVRFTDNLAPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLL
GYLKEILPRRPDLKLIVTSATIDADRFARHFGSDERPAPVIEVSGRLYPVEMRYRPVAEDRPAVKNAEGTGGRDRVKTAR
EAERDLMDAIVDAVDELCREGPGDVLVFLPGEREIREAAEALRKHHPPHTEILPLFARLSAADQDKVFKASNARRIVLAT
NVAETSLTVPGIRYVVDTGLARVKRYSYRNKVEQLQVESISQAAANQRAGRCGRVADGVCIRLYEESDYQARARFTDPEI
LRSSLASVILRMKSLHLTAIESFPFLEPPPGRAIADGYQLLNELGAVDDDNALTPLGRELARLPLDPRVGRMILAARDQQ
SLREVLIIASALSVQDPRDRPIEAQEQADQAHRRFADERSEFLQWLKIWAWFEEAVAHKKSNRQLIDACRQNFLSHLRLR
EWRDVHSQLLTVVREHGWRLNEVEATYEQIHLALLTGLLGNLGLKADDDPHYLGARGIKFYLWPGSVLAKKAGRWVMAAE
LVETSRLYARCLAKIEPEWVEKVGAHLLKKSLSEPHWEKRPAQVSAYERATLYGLPIYHRRRVAFGKQDPSRARELFIRG
ALVEGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDDELIYAYYDQAIPEGIHTGAAFERWYRDEVKKGGQPEDKLR
LLYLSRDDLMRHEAAGVTTELFPKRATMAGVEMALTYHFEPGTPRDGVTLAVPLYALNQVDARRCEWLVPGMLKEKVQLL
LKSLPQKLRRHCVPLPEYAAGFVERMGRERFGAGGLVEALIADVRGETQIAMKTADFKLETLPAHLFMNFKVIDEHGRQL
AMGRNLAQLRQELGAQAQQQFQKIAAASTIAAGGDADDGQPIGQAPATAATTGAAGRNAKAGKGAAPQTAAPAEAGATAL
YENLTTWNFGKLPELLEIRRRGQTLYGYPALVDRGTHCDVEVFDSPEEAARIHRAGLRRLFALQLKEPIKFLEKNLPGLR
EMAMQYMSLGTQDELRDQLIDTALDRACLQDPLPDDDASFHARRDEGRSRLNLLAQEIARLVGQILAEYAGLVKKLAQAK
PFAQAHADLQQQLGALVGKRFVIDTPYAQLAHFPRYLKGIALRIDKLKADPARDAKQSADLLPLAQQYQRAVSQRGGVAD
SRLAEFRWLLEELRISLFAQELRTPMPVSVKRLHKVWESMQR

Sequences:

>Translated_1402_residues
MSNVSKSPAPTRANTPSARHPDGAADAREQQGQPPRQQQDKPAGTPAHAPRGPRGDERRSDARQPAAKGAPQATGERPPR
RERPPRAVVAPNPVPPITYPESLPVSGKRDEIARAIAGHQVVIVCGETGSGKTTQLPKICLDLGRGLGAGGTGLIGHTQP
RRLAASSTGRRIAEELGTPFGEVVGYKVRFTDNLAPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLL
GYLKEILPRRPDLKLIVTSATIDADRFARHFGSDERPAPVIEVSGRLYPVEMRYRPVAEDRPAVKNAEGTGGRDRVKTAR
EAERDLMDAIVDAVDELCREGPGDVLVFLPGEREIREAAEALRKHHPPHTEILPLFARLSAADQDKVFKASNARRIVLAT
NVAETSLTVPGIRYVVDTGLARVKRYSYRNKVEQLQVESISQAAANQRAGRCGRVADGVCIRLYEESDYQARARFTDPEI
LRSSLASVILRMKSLHLTAIESFPFLEPPPGRAIADGYQLLNELGAVDDDNALTPLGRELARLPLDPRVGRMILAARDQQ
SLREVLIIASALSVQDPRDRPIEAQEQADQAHRRFADERSEFLQWLKIWAWFEEAVAHKKSNRQLIDACRQNFLSHLRLR
EWRDVHSQLLTVVREHGWRLNEVEATYEQIHLALLTGLLGNLGLKADDDPHYLGARGIKFYLWPGSVLAKKAGRWVMAAE
LVETSRLYARCLAKIEPEWVEKVGAHLLKKSLSEPHWEKRPAQVSAYERATLYGLPIYHRRRVAFGKQDPSRARELFIRG
ALVEGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDDELIYAYYDQAIPEGIHTGAAFERWYRDEVKKGGQPEDKLR
LLYLSRDDLMRHEAAGVTTELFPKRATMAGVEMALTYHFEPGTPRDGVTLAVPLYALNQVDARRCEWLVPGMLKEKVQLL
LKSLPQKLRRHCVPLPEYAAGFVERMGRERFGAGGLVEALIADVRGETQIAMKTADFKLETLPAHLFMNFKVIDEHGRQL
AMGRNLAQLRQELGAQAQQQFQKIAAASTIAAGGDADDGQPIGQAPATAATTGAAGRNAKAGKGAAPQTAAPAEAGATAL
YENLTTWNFGKLPELLEIRRRGQTLYGYPALVDRGTHCDVEVFDSPEEAARIHRAGLRRLFALQLKEPIKFLEKNLPGLR
EMAMQYMSLGTQDELRDQLIDTALDRACLQDPLPDDDASFHARRDEGRSRLNLLAQEIARLVGQILAEYAGLVKKLAQAK
PFAQAHADLQQQLGALVGKRFVIDTPYAQLAHFPRYLKGIALRIDKLKADPARDAKQSADLLPLAQQYQRAVSQRGGVAD
SRLAEFRWLLEELRISLFAQELRTPMPVSVKRLHKVWESMQR
>Mature_1401_residues
SNVSKSPAPTRANTPSARHPDGAADAREQQGQPPRQQQDKPAGTPAHAPRGPRGDERRSDARQPAAKGAPQATGERPPRR
ERPPRAVVAPNPVPPITYPESLPVSGKRDEIARAIAGHQVVIVCGETGSGKTTQLPKICLDLGRGLGAGGTGLIGHTQPR
RLAASSTGRRIAEELGTPFGEVVGYKVRFTDNLAPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLG
YLKEILPRRPDLKLIVTSATIDADRFARHFGSDERPAPVIEVSGRLYPVEMRYRPVAEDRPAVKNAEGTGGRDRVKTARE
AERDLMDAIVDAVDELCREGPGDVLVFLPGEREIREAAEALRKHHPPHTEILPLFARLSAADQDKVFKASNARRIVLATN
VAETSLTVPGIRYVVDTGLARVKRYSYRNKVEQLQVESISQAAANQRAGRCGRVADGVCIRLYEESDYQARARFTDPEIL
RSSLASVILRMKSLHLTAIESFPFLEPPPGRAIADGYQLLNELGAVDDDNALTPLGRELARLPLDPRVGRMILAARDQQS
LREVLIIASALSVQDPRDRPIEAQEQADQAHRRFADERSEFLQWLKIWAWFEEAVAHKKSNRQLIDACRQNFLSHLRLRE
WRDVHSQLLTVVREHGWRLNEVEATYEQIHLALLTGLLGNLGLKADDDPHYLGARGIKFYLWPGSVLAKKAGRWVMAAEL
VETSRLYARCLAKIEPEWVEKVGAHLLKKSLSEPHWEKRPAQVSAYERATLYGLPIYHRRRVAFGKQDPSRARELFIRGA
LVEGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDDELIYAYYDQAIPEGIHTGAAFERWYRDEVKKGGQPEDKLRL
LYLSRDDLMRHEAAGVTTELFPKRATMAGVEMALTYHFEPGTPRDGVTLAVPLYALNQVDARRCEWLVPGMLKEKVQLLL
KSLPQKLRRHCVPLPEYAAGFVERMGRERFGAGGLVEALIADVRGETQIAMKTADFKLETLPAHLFMNFKVIDEHGRQLA
MGRNLAQLRQELGAQAQQQFQKIAAASTIAAGGDADDGQPIGQAPATAATTGAAGRNAKAGKGAAPQTAAPAEAGATALY
ENLTTWNFGKLPELLEIRRRGQTLYGYPALVDRGTHCDVEVFDSPEEAARIHRAGLRRLFALQLKEPIKFLEKNLPGLRE
MAMQYMSLGTQDELRDQLIDTALDRACLQDPLPDDDASFHARRDEGRSRLNLLAQEIARLVGQILAEYAGLVKKLAQAKP
FAQAHADLQQQLGALVGKRFVIDTPYAQLAHFPRYLKGIALRIDKLKADPARDAKQSADLLPLAQQYQRAVSQRGGVADS
RLAEFRWLLEELRISLFAQELRTPMPVSVKRLHKVWESMQR

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI68509926, Length=664, Percent_Identity=36.8975903614458, Blast_Score=406, Evalue=1e-113,
Organism=Homo sapiens, GI4826690, Length=662, Percent_Identity=35.9516616314199, Blast_Score=404, Evalue=1e-112,
Organism=Homo sapiens, GI256000749, Length=717, Percent_Identity=35.2859135285914, Blast_Score=382, Evalue=1e-105,
Organism=Homo sapiens, GI255982614, Length=717, Percent_Identity=35.2859135285914, Blast_Score=381, Evalue=1e-105,
Organism=Homo sapiens, GI17999539, Length=654, Percent_Identity=34.5565749235474, Blast_Score=378, Evalue=1e-104,
Organism=Homo sapiens, GI20544129, Length=679, Percent_Identity=35.4933726067747, Blast_Score=372, Evalue=1e-102,
Organism=Homo sapiens, GI38158022, Length=562, Percent_Identity=37.3665480427046, Blast_Score=360, Evalue=4e-99,
Organism=Homo sapiens, GI299829255, Length=626, Percent_Identity=35.3035143769968, Blast_Score=343, Evalue=7e-94,
Organism=Homo sapiens, GI20336302, Length=702, Percent_Identity=31.9088319088319, Blast_Score=342, Evalue=2e-93,
Organism=Homo sapiens, GI261878478, Length=721, Percent_Identity=31.9001386962552, Blast_Score=315, Evalue=2e-85,
Organism=Homo sapiens, GI67782362, Length=729, Percent_Identity=30.4526748971193, Blast_Score=291, Evalue=3e-78,
Organism=Homo sapiens, GI167830433, Length=605, Percent_Identity=32.7272727272727, Blast_Score=281, Evalue=3e-75,
Organism=Homo sapiens, GI20336294, Length=526, Percent_Identity=34.7908745247148, Blast_Score=278, Evalue=3e-74,
Organism=Homo sapiens, GI39777586, Length=640, Percent_Identity=31.25, Blast_Score=277, Evalue=5e-74,
Organism=Homo sapiens, GI20336290, Length=526, Percent_Identity=34.7908745247148, Blast_Score=277, Evalue=5e-74,
Organism=Homo sapiens, GI167830436, Length=602, Percent_Identity=32.3920265780731, Blast_Score=275, Evalue=2e-73,
Organism=Homo sapiens, GI100913206, Length=600, Percent_Identity=31.1666666666667, Blast_Score=252, Evalue=2e-66,
Organism=Homo sapiens, GI261878481, Length=575, Percent_Identity=30.2608695652174, Blast_Score=239, Evalue=1e-62,
Organism=Homo sapiens, GI166851804, Length=642, Percent_Identity=28.6604361370716, Blast_Score=217, Evalue=7e-56,
Organism=Homo sapiens, GI20336300, Length=663, Percent_Identity=25.4901960784314, Blast_Score=201, Evalue=4e-51,
Organism=Homo sapiens, GI269847874, Length=521, Percent_Identity=27.2552783109405, Blast_Score=165, Evalue=3e-40,
Organism=Homo sapiens, GI163914394, Length=504, Percent_Identity=30.7539682539683, Blast_Score=164, Evalue=6e-40,
Organism=Homo sapiens, GI29029601, Length=270, Percent_Identity=36.6666666666667, Blast_Score=160, Evalue=1e-38,
Organism=Escherichia coli, GI145693127, Length=1318, Percent_Identity=45.9028831562974, Blast_Score=1106, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=460, Percent_Identity=33.9130434782609, Blast_Score=221, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17535281, Length=660, Percent_Identity=34.6969696969697, Blast_Score=385, Evalue=1e-107,
Organism=Caenorhabditis elegans, GI17554326, Length=657, Percent_Identity=35.9208523592085, Blast_Score=377, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI17531507, Length=663, Percent_Identity=35.8974358974359, Blast_Score=375, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI25144243, Length=667, Percent_Identity=33.1334332833583, Blast_Score=364, Evalue=1e-100,
Organism=Caenorhabditis elegans, GI17556386, Length=750, Percent_Identity=33.2, Blast_Score=360, Evalue=3e-99,
Organism=Caenorhabditis elegans, GI32565154, Length=662, Percent_Identity=33.6858006042296, Blast_Score=358, Evalue=1e-98,
Organism=Caenorhabditis elegans, GI71990212, Length=737, Percent_Identity=29.1723202170963, Blast_Score=302, Evalue=8e-82,
Organism=Caenorhabditis elegans, GI71996313, Length=488, Percent_Identity=34.8360655737705, Blast_Score=264, Evalue=3e-70,
Organism=Caenorhabditis elegans, GI86562256, Length=605, Percent_Identity=30.2479338842975, Blast_Score=223, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17507503, Length=424, Percent_Identity=26.6509433962264, Blast_Score=152, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17552054, Length=273, Percent_Identity=33.3333333333333, Blast_Score=146, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6320850, Length=670, Percent_Identity=34.9253731343284, Blast_Score=402, Evalue=1e-112,
Organism=Saccharomyces cerevisiae, GI6321318, Length=664, Percent_Identity=34.789156626506, Blast_Score=385, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6322939, Length=672, Percent_Identity=34.8214285714286, Blast_Score=338, Evalue=3e-93,
Organism=Saccharomyces cerevisiae, GI6322772, Length=676, Percent_Identity=32.5443786982249, Blast_Score=313, Evalue=9e-86,
Organism=Saccharomyces cerevisiae, GI6324338, Length=683, Percent_Identity=31.1859443631039, Blast_Score=310, Evalue=1e-84,
Organism=Saccharomyces cerevisiae, GI6323451, Length=485, Percent_Identity=30.1030927835052, Blast_Score=212, Evalue=4e-55,
Organism=Saccharomyces cerevisiae, GI6323776, Length=212, Percent_Identity=41.9811320754717, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI20129977, Length=662, Percent_Identity=36.2537764350453, Blast_Score=402, Evalue=1e-112,
Organism=Drosophila melanogaster, GI19921728, Length=661, Percent_Identity=35.5521936459909, Blast_Score=399, Evalue=1e-110,
Organism=Drosophila melanogaster, GI19921526, Length=679, Percent_Identity=34.7569955817378, Blast_Score=371, Evalue=1e-102,
Organism=Drosophila melanogaster, GI19920696, Length=665, Percent_Identity=34.2857142857143, Blast_Score=366, Evalue=1e-101,
Organism=Drosophila melanogaster, GI18859729, Length=654, Percent_Identity=35.474006116208, Blast_Score=365, Evalue=1e-101,
Organism=Drosophila melanogaster, GI45550174, Length=693, Percent_Identity=32.1789321789322, Blast_Score=350, Evalue=4e-96,
Organism=Drosophila melanogaster, GI24643238, Length=566, Percent_Identity=32.8621908127208, Blast_Score=298, Evalue=2e-80,
Organism=Drosophila melanogaster, GI24585491, Length=608, Percent_Identity=31.7434210526316, Blast_Score=294, Evalue=4e-79,
Organism=Drosophila melanogaster, GI24585920, Length=508, Percent_Identity=33.2677165354331, Blast_Score=257, Evalue=5e-68,
Organism=Drosophila melanogaster, GI17136342, Length=508, Percent_Identity=33.2677165354331, Blast_Score=256, Evalue=7e-68,
Organism=Drosophila melanogaster, GI24642763, Length=640, Percent_Identity=32.8125, Blast_Score=254, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24641139, Length=630, Percent_Identity=32.0634920634921, Blast_Score=245, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24641942, Length=495, Percent_Identity=30.3030303030303, Blast_Score=218, Evalue=2e-56,
Organism=Drosophila melanogaster, GI17136508, Length=507, Percent_Identity=33.3333333333333, Blast_Score=213, Evalue=6e-55,
Organism=Drosophila melanogaster, GI17136242, Length=328, Percent_Identity=31.7073170731707, Blast_Score=158, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 156056; Mature: 155925

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVSKSPAPTRANTPSARHPDGAADAREQQGQPPRQQQDKPAGTPAHAPRGPRGDERRS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCHHHH
DARQPAAKGAPQATGERPPRRERPPRAVVAPNPVPPITYPESLPVSGKRDEIARAIAGHQ
HHHCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCE
VVIVCGETGSGKTTQLPKICLDLGRGLGAGGTGLIGHTQPRRLAASSTGRRIAEELGTPF
EEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH
GEVVGYKVRFTDNLAPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLL
HHHCEEEEEEECCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHCCHHHCCCCHHHHH
GYLKEILPRRPDLKLIVTSATIDADRFARHFGSDERPAPVIEVSGRLYPVEMRYRPVAED
HHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCC
RPAVKNAEGTGGRDRVKTAREAERDLMDAIVDAVDELCREGPGDVLVFLPGEREIREAAE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
ALRKHHPPHTEILPLFARLSAADQDKVFKASNARRIVLATNVAETSLTVPGIRYVVDTGL
HHHHCCCCCHHHHHHHHHHCCCCHHHHEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
ARVKRYSYRNKVEQLQVESISQAAANQRAGRCGRVADGVCIRLYEESDYQARARFTDPEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHCCCCHHH
LRSSLASVILRMKSLHLTAIESFPFLEPPPGRAIADGYQLLNELGAVDDDNALTPLGREL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
ARLPLDPRVGRMILAARDQQSLREVLIIASALSVQDPRDRPIEAQEQADQAHRRFADERS
HHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
EFLQWLKIWAWFEEAVAHKKSNRQLIDACRQNFLSHLRLREWRDVHSQLLTVVREHGWRL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NEVEATYEQIHLALLTGLLGNLGLKADDDPHYLGARGIKFYLWPGSVLAKKAGRWVMAAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEECCCHHHHHHCCCCHHHHH
LVETSRLYARCLAKIEPEWVEKVGAHLLKKSLSEPHWEKRPAQVSAYERATLYGLPIYHR
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCHHHH
RRVAFGKQDPSRARELFIRGALVEGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDD
HHHHCCCCCHHHHHHHHHHHCEECCCCCCEEEEHHCCCHHHHHHHHHHHHHHHCCCEECC
ELIYAYYDQAIPEGIHTGAAFERWYRDEVKKGGQPEDKLRLLYLSRDDLMRHEAAGVTTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHCCCHHH
LFPKRATMAGVEMALTYHFEPGTPRDGVTLAVPLYALNQVDARRCEWLVPGMLKEKVQLL
HCCCHHHHHCEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LKSLPQKLRRHCVPLPEYAAGFVERMGRERFGAGGLVEALIADVRGETQIAMKTADFKLE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCHH
TLPAHLFMNFKVIDEHGRQLAMGRNLAQLRQELGAQAQQQFQKIAAASTIAAGGDADDGQ
HCCHHHHEEEEEEHHCCHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC
PIGQAPATAATTGAAGRNAKAGKGAAPQTAAPAEAGATALYENLTTWNFGKLPELLEIRR
CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
RGQTLYGYPALVDRGTHCDVEVFDSPEEAARIHRAGLRRLFALQLKEPIKFLEKNLPGLR
CCCEEECCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EMAMQYMSLGTQDELRDQLIDTALDRACLQDPLPDDDASFHARRDEGRSRLNLLAQEIAR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LVGQILAEYAGLVKKLAQAKPFAQAHADLQQQLGALVGKRFVIDTPYAQLAHFPRYLKGI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
ALRIDKLKADPARDAKQSADLLPLAQQYQRAVSQRGGVADSRLAEFRWLLEELRISLFAQ
HHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ELRTPMPVSVKRLHKVWESMQR
HHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNVSKSPAPTRANTPSARHPDGAADAREQQGQPPRQQQDKPAGTPAHAPRGPRGDERRS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCHHHH
DARQPAAKGAPQATGERPPRRERPPRAVVAPNPVPPITYPESLPVSGKRDEIARAIAGHQ
HHHCCHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCE
VVIVCGETGSGKTTQLPKICLDLGRGLGAGGTGLIGHTQPRRLAASSTGRRIAEELGTPF
EEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH
GEVVGYKVRFTDNLAPGASVKLMTDGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLL
HHHCEEEEEEECCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHCCHHHCCCCHHHHH
GYLKEILPRRPDLKLIVTSATIDADRFARHFGSDERPAPVIEVSGRLYPVEMRYRPVAED
HHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCC
RPAVKNAEGTGGRDRVKTAREAERDLMDAIVDAVDELCREGPGDVLVFLPGEREIREAAE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
ALRKHHPPHTEILPLFARLSAADQDKVFKASNARRIVLATNVAETSLTVPGIRYVVDTGL
HHHHCCCCCHHHHHHHHHHCCCCHHHHEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
ARVKRYSYRNKVEQLQVESISQAAANQRAGRCGRVADGVCIRLYEESDYQARARFTDPEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHCCCCHHH
LRSSLASVILRMKSLHLTAIESFPFLEPPPGRAIADGYQLLNELGAVDDDNALTPLGREL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
ARLPLDPRVGRMILAARDQQSLREVLIIASALSVQDPRDRPIEAQEQADQAHRRFADERS
HHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
EFLQWLKIWAWFEEAVAHKKSNRQLIDACRQNFLSHLRLREWRDVHSQLLTVVREHGWRL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NEVEATYEQIHLALLTGLLGNLGLKADDDPHYLGARGIKFYLWPGSVLAKKAGRWVMAAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEECCCHHHHHHCCCCHHHHH
LVETSRLYARCLAKIEPEWVEKVGAHLLKKSLSEPHWEKRPAQVSAYERATLYGLPIYHR
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCHHHH
RRVAFGKQDPSRARELFIRGALVEGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDD
HHHHCCCCCHHHHHHHHHHHCEECCCCCCEEEEHHCCCHHHHHHHHHHHHHHHCCCEECC
ELIYAYYDQAIPEGIHTGAAFERWYRDEVKKGGQPEDKLRLLYLSRDDLMRHEAAGVTTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECHHHHHHHHHCCCHHH
LFPKRATMAGVEMALTYHFEPGTPRDGVTLAVPLYALNQVDARRCEWLVPGMLKEKVQLL
HCCCHHHHHCEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LKSLPQKLRRHCVPLPEYAAGFVERMGRERFGAGGLVEALIADVRGETQIAMKTADFKLE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCHH
TLPAHLFMNFKVIDEHGRQLAMGRNLAQLRQELGAQAQQQFQKIAAASTIAAGGDADDGQ
HCCHHHHEEEEEEHHCCHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC
PIGQAPATAATTGAAGRNAKAGKGAAPQTAAPAEAGATALYENLTTWNFGKLPELLEIRR
CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
RGQTLYGYPALVDRGTHCDVEVFDSPEEAARIHRAGLRRLFALQLKEPIKFLEKNLPGLR
CCCEEECCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EMAMQYMSLGTQDELRDQLIDTALDRACLQDPLPDDDASFHARRDEGRSRLNLLAQEIAR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LVGQILAEYAGLVKKLAQAKPFAQAHADLQQQLGALVGKRFVIDTPYAQLAHFPRYLKGI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH
ALRIDKLKADPARDAKQSADLLPLAQQYQRAVSQRGGVADSRLAEFRWLLEELRISLFAQ
HHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ELRTPMPVSVKRLHKVWESMQR
HHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]