Click here to switch to the map view.

The map label for this gene is lutB [H]

Identifier: 78066905

GI number: 78066905

Start: 2503690

End: 2505102

Strand: Reverse

Name: lutB [H]

Synonym: Bcep18194_A5436

Alternate gene names: 78066905

Gene position: 2505102-2503690 (Counterclockwise)

Preceding gene: 78066906

Following gene: 78066904

Centisome position: 67.81

GC content: 68.01

Gene sequence:

>1413_bases
ATGCAAGTCCAATCGATGCATTTCAAAGCGCGCGCCGGCCAGAAGCTGGCCGACCAGCGCCTGCAGCAGAACCTGAAGAA
GCTGTCGACGAAATTCGTGTCCGCGCGCGCCGACGCGATGACCGCGATCGACTTCCCGGCCACGCGCGCCGCACTGAAGG
CCCGCCGCAACCGCGCGCTGGAGAACCTTGACGTGTGGCTCGAGGCGTTCGAGCGCGAGGCGACGCGGCGCGGCACGACG
GTGCTGTTCGCCGAAACGACCGCGGATGCCGCACGGCTCGTGGCCGACATCGCGCGCCGTCACGACGTGAAGAAGGTCAT
CAAGACCAAGTCGATGGTGTCGGAGGAAATGCGCCTGAACGCGGTGCTCGCGGAGATGGGCGTGCAGTCGATCGAGACGG
ATCTCGGCGAATACATCCTGCAGATCAACGACAACGAGCCGCCGAGCCACATCATTGCGCCCGTCGTGCACAAGGACAAG
GACGAGATCGCCGACCTGTTCGCGCGCACGCACCATCGCGAGCGGCTCACCGAGATTCCGGACATGACGCGCGAGGCGCG
CGAGGTGCTGCGCCCGCATTTCATGTCGGCCGACATGGGCGTGACGGGCGGCAACTTCGTGATTGCCGAGACCGGTTCGG
TCGCGATCGTGACGAATGAAGGGAACGAGGGGATGTGCACCGTGATGCCGCGCGTGCATGTGGCGGTGACGGGCATCGAG
AAGGTGCTGCCGACGCTCGAGGATCTCGCGACCGCGATGCGCCTGCTGCCGCGCTCCGCGACGGGGCAGAAGACGTCGAA
CTACTTCTCGCTGCTGACCGGGCCGCGGGGCCCGGGCGACGAGGATGGCCCCGAACACAACTATGTCGTGCTCGTCGACG
GCGGCCGCACCGGGCTGATCGGCGGCGAATTCCAGGAGATGCTGCGCTGCATCCGCTGCGGCGCATGCATGAACCATTGT
CCGGTGTACCAGAAGGTCGGCGGCCACGCGTACGGCTGGGTCTATCCGGGGCCGATGGGGTCCGTGCTGACGCCGAGCTA
CGTCGGGCTCGACCGCTCTCTCGACCTGCCGCAGGCCGCAACCCTATGCGGAGAATGCGACAGCGTGTGCCCGGCCGGGA
TTCCGCTGTCGCACCTGTTGCGCACGCTGCGCGAGAAGCAGGTCGAGCGGCACCTGCGGCCGTGGCGCGAGCGGGCGGCA
CTCGCCGCCTGGGGCTTCTTCGCACGCCGGCCGATGCTGTACGCGCTGACGACCAAGCTCGCGGTGCGCATCCTCGAGCG
GCTGGGCGGCAACGGCGGCACGCTGCGGCGCCTGCCGATGATGGGCGGCTGGATGGATACGCGCGACATGCCGACGCCGA
CCGGGCGCACGTTCCGCGAGCTGTACGCGGCCTCGCAAAGTCACCTCGGCTGA

Upstream 100 bases:

>100_bases
CGCCGCACCGGCGACCGCGACACGCGCGTGCTGCACGTCGCGCAGGTGCTGGCGGGCGACGTCTGACGCCCGGTTCCGCT
CACTTTTCCCCGATACCGCG

Downstream 100 bases:

>100_bases
CGACTGTTCATCCGGTGACAACAGTGCGTTCGCTATTTGTATATTTATCTCGATAGGTGCGGTCTATAGAATCCTGTCTG
TAGTCCCCGGAATTGGGTTT

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MQVQSMHFKARAGQKLADQRLQQNLKKLSTKFVSARADAMTAIDFPATRAALKARRNRALENLDVWLEAFEREATRRGTT
VLFAETTADAARLVADIARRHDVKKVIKTKSMVSEEMRLNAVLAEMGVQSIETDLGEYILQINDNEPPSHIIAPVVHKDK
DEIADLFARTHHRERLTEIPDMTREAREVLRPHFMSADMGVTGGNFVIAETGSVAIVTNEGNEGMCTVMPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQKTSNYFSLLTGPRGPGDEDGPEHNYVVLVDGGRTGLIGGEFQEMLRCIRCGACMNHC
PVYQKVGGHAYGWVYPGPMGSVLTPSYVGLDRSLDLPQAATLCGECDSVCPAGIPLSHLLRTLREKQVERHLRPWRERAA
LAAWGFFARRPMLYALTTKLAVRILERLGGNGGTLRRLPMMGGWMDTRDMPTPTGRTFRELYAASQSHLG

Sequences:

>Translated_470_residues
MQVQSMHFKARAGQKLADQRLQQNLKKLSTKFVSARADAMTAIDFPATRAALKARRNRALENLDVWLEAFEREATRRGTT
VLFAETTADAARLVADIARRHDVKKVIKTKSMVSEEMRLNAVLAEMGVQSIETDLGEYILQINDNEPPSHIIAPVVHKDK
DEIADLFARTHHRERLTEIPDMTREAREVLRPHFMSADMGVTGGNFVIAETGSVAIVTNEGNEGMCTVMPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQKTSNYFSLLTGPRGPGDEDGPEHNYVVLVDGGRTGLIGGEFQEMLRCIRCGACMNHC
PVYQKVGGHAYGWVYPGPMGSVLTPSYVGLDRSLDLPQAATLCGECDSVCPAGIPLSHLLRTLREKQVERHLRPWRERAA
LAAWGFFARRPMLYALTTKLAVRILERLGGNGGTLRRLPMMGGWMDTRDMPTPTGRTFRELYAASQSHLG
>Mature_470_residues
MQVQSMHFKARAGQKLADQRLQQNLKKLSTKFVSARADAMTAIDFPATRAALKARRNRALENLDVWLEAFEREATRRGTT
VLFAETTADAARLVADIARRHDVKKVIKTKSMVSEEMRLNAVLAEMGVQSIETDLGEYILQINDNEPPSHIIAPVVHKDK
DEIADLFARTHHRERLTEIPDMTREAREVLRPHFMSADMGVTGGNFVIAETGSVAIVTNEGNEGMCTVMPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQKTSNYFSLLTGPRGPGDEDGPEHNYVVLVDGGRTGLIGGEFQEMLRCIRCGACMNHC
PVYQKVGGHAYGWVYPGPMGSVLTPSYVGLDRSLDLPQAATLCGECDSVCPAGIPLSHLLRTLREKQVERHLRPWRERAA
LAAWGFFARRPMLYALTTKLAVRILERLGGNGGTLRRLPMMGGWMDTRDMPTPTGRTFRELYAASQSHLG

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=474, Percent_Identity=38.3966244725738, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 52025; Mature: 52025

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVQSMHFKARAGQKLADQRLQQNLKKLSTKFVSARADAMTAIDFPATRAALKARRNRAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH
ENLDVWLEAFEREATRRGTTVLFAETTADAARLVADIARRHDVKKVIKTKSMVSEEMRLN
HHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLAEMGVQSIETDLGEYILQINDNEPPSHIIAPVVHKDKDEIADLFARTHHRERLTEIP
HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHCH
DMTREAREVLRPHFMSADMGVTGGNFVIAETGSVAIVTNEGNEGMCTVMPRVHVAVTGIE
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHHHHHHHHH
KVLPTLEDLATAMRLLPRSATGQKTSNYFSLLTGPRGPGDEDGPEHNYVVLVDGGRTGLI
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCEEEEEECCCCCCC
GGEFQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLDRSLDLPQAA
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCHHH
TLCGECDSVCPAGIPLSHLLRTLREKQVERHLRPWRERAALAAWGFFARRPMLYALTTKL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AVRILERLGGNGGTLRRLPMMGGWMDTRDMPTPTGRTFRELYAASQSHLG
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVQSMHFKARAGQKLADQRLQQNLKKLSTKFVSARADAMTAIDFPATRAALKARRNRAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH
ENLDVWLEAFEREATRRGTTVLFAETTADAARLVADIARRHDVKKVIKTKSMVSEEMRLN
HHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLAEMGVQSIETDLGEYILQINDNEPPSHIIAPVVHKDKDEIADLFARTHHRERLTEIP
HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHCH
DMTREAREVLRPHFMSADMGVTGGNFVIAETGSVAIVTNEGNEGMCTVMPRVHVAVTGIE
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHHHHHHHHH
KVLPTLEDLATAMRLLPRSATGQKTSNYFSLLTGPRGPGDEDGPEHNYVVLVDGGRTGLI
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCEEEEEECCCCCCC
GGEFQEMLRCIRCGACMNHCPVYQKVGGHAYGWVYPGPMGSVLTPSYVGLDRSLDLPQAA
CHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCHHH
TLCGECDSVCPAGIPLSHLLRTLREKQVERHLRPWRERAALAAWGFFARRPMLYALTTKL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AVRILERLGGNGGTLRRLPMMGGWMDTRDMPTPTGRTFRELYAASQSHLG
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA