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The map label for this gene is trpH [H]

Identifier: 78066875

GI number: 78066875

Start: 2473586

End: 2474425

Strand: Reverse

Name: trpH [H]

Synonym: Bcep18194_A5406

Alternate gene names: 78066875

Gene position: 2474425-2473586 (Counterclockwise)

Preceding gene: 78066876

Following gene: 78066874

Centisome position: 66.98

GC content: 69.4

Gene sequence:

>840_bases
ATGCCGACAATGAACGCTGATCTCCACTGCCATTCGAATGTTTCCGACGGGTTGCTGTCGCCTGCCGACGTCGCGCGCCG
CGCCCATGCCGGCGGCGTGACCCTGTGGGCGCTGACCGACCACGACGAGATCGGCGGCCAGGCAGCGGCGCGCAGCGAAG
CGGAAGCGCTCGGCATGCGCTACCTGAGCGGCGTCGAGATTTCGGTCACGTGGGCGTCGCGCACCGTGCACATCGTCGGC
CTGAATGTCGATCCCGCGAACCAGGTGCTCGTCGACGGCCTGTACCGCACGCGCCATGGCCGCGCGGCACGCGCGGTGGC
GATCGGCGAGCAGCTCGCCACGCTCGGCATTCCCGGTGCGTACGAAGGCGCGCTGAAGTACGTGTCGAATCCCGACCTGA
TCTCGCGCACGCACTTCGCCCGTTTTCTCGTCGAGAACGGTCACGCCACGTCGACGTCCGATGTGTTCGATCGCATGCTC
GGCGACGGCAAGCCCGGGTTCGTCCCGCACCGCTGGGCGACGCTGCCCGACGCTGTCGCGTGGATTCGGGCGGCCGGCGG
CGAAGCCGTGGTCGCGCATCCGGGCCGCTACCGTTACACGCCCGTCGAATTCGACGCGTTCTTCGGCGAGTTCATCGATC
TGGGCGGCCGCGCGATCGAGGTCGTCACGGGCAGCCACACCCCCGACCAGTACCGCGAATACGCGGACGTCGCCCGCCGC
TTCGGCTTCGAAGCGTCGCGCGGCTCGGATTTCCATGCGCCAGGCGAGGGCCGTGTCGAGCTCGGCAGCCTGCCGCCGTT
GCCGCCCGACCTGACTCCGGTCTGGGAGCGCTGGCTCTGA

Upstream 100 bases:

>100_bases
GGCGCTGATCGAGGCGTTCTGCGCGTAAGCGCGCGGCGGCAGCGGCGGGGCAGGCGGGCGGCGCATTGCCGCGTTGCAGT
AGAATGAAGCCTTACCTGCC

Downstream 100 bases:

>100_bases
CACTGGGCGGCGGCCTGCCGTCCGCGTTGCCGTCGGCGCGCATCCGACTTTTCCCCCTTTACGACTCCCCATGTCCCAGT
TCTTCAGGATTCACCCGGAT

Product: PHP-like metal-dependent phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MPTMNADLHCHSNVSDGLLSPADVARRAHAGGVTLWALTDHDEIGGQAAARSEAEALGMRYLSGVEISVTWASRTVHIVG
LNVDPANQVLVDGLYRTRHGRAARAVAIGEQLATLGIPGAYEGALKYVSNPDLISRTHFARFLVENGHATSTSDVFDRML
GDGKPGFVPHRWATLPDAVAWIRAAGGEAVVAHPGRYRYTPVEFDAFFGEFIDLGGRAIEVVTGSHTPDQYREYADVARR
FGFEASRGSDFHAPGEGRVELGSLPPLPPDLTPVWERWL

Sequences:

>Translated_279_residues
MPTMNADLHCHSNVSDGLLSPADVARRAHAGGVTLWALTDHDEIGGQAAARSEAEALGMRYLSGVEISVTWASRTVHIVG
LNVDPANQVLVDGLYRTRHGRAARAVAIGEQLATLGIPGAYEGALKYVSNPDLISRTHFARFLVENGHATSTSDVFDRML
GDGKPGFVPHRWATLPDAVAWIRAAGGEAVVAHPGRYRYTPVEFDAFFGEFIDLGGRAIEVVTGSHTPDQYREYADVARR
FGFEASRGSDFHAPGEGRVELGSLPPLPPDLTPVWERWL
>Mature_278_residues
PTMNADLHCHSNVSDGLLSPADVARRAHAGGVTLWALTDHDEIGGQAAARSEAEALGMRYLSGVEISVTWASRTVHIVGL
NVDPANQVLVDGLYRTRHGRAARAVAIGEQLATLGIPGAYEGALKYVSNPDLISRTHFARFLVENGHATSTSDVFDRMLG
DGKPGFVPHRWATLPDAVAWIRAAGGEAVVAHPGRYRYTPVEFDAFFGEFIDLGGRAIEVVTGSHTPDQYREYADVARRF
GFEASRGSDFHAPGEGRVELGSLPPLPPDLTPVWERWL

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=274, Percent_Identity=39.7810218978102, Blast_Score=193, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 30190; Mature: 30059

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTMNADLHCHSNVSDGLLSPADVARRAHAGGVTLWALTDHDEIGGQAAARSEAEALGMR
CCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEECCHHHCCHHHHHHHHHHHHHH
YLSGVEISVTWASRTVHIVGLNVDPANQVLVDGLYRTRHGRAARAVAIGEQLATLGIPGA
HHCCCEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
YEGALKYVSNPDLISRTHFARFLVENGHATSTSDVFDRMLGDGKPGFVPHRWATLPDAVA
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
WIRAAGGEAVVAHPGRYRYTPVEFDAFFGEFIDLGGRAIEVVTGSHTPDQYREYADVARR
HHHHCCCCEEEECCCCEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH
FGFEASRGSDFHAPGEGRVELGSLPPLPPDLTPVWERWL
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
PTMNADLHCHSNVSDGLLSPADVARRAHAGGVTLWALTDHDEIGGQAAARSEAEALGMR
CCCCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEECCHHHCCHHHHHHHHHHHHHH
YLSGVEISVTWASRTVHIVGLNVDPANQVLVDGLYRTRHGRAARAVAIGEQLATLGIPGA
HHCCCEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
YEGALKYVSNPDLISRTHFARFLVENGHATSTSDVFDRMLGDGKPGFVPHRWATLPDAVA
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
WIRAAGGEAVVAHPGRYRYTPVEFDAFFGEFIDLGGRAIEVVTGSHTPDQYREYADVARR
HHHHCCCCEEEECCCCEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH
FGFEASRGSDFHAPGEGRVELGSLPPLPPDLTPVWERWL
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]