| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yheS [H]
Identifier: 78066814
GI number: 78066814
Start: 2403661
End: 2405592
Strand: Direct
Name: yheS [H]
Synonym: Bcep18194_A5345
Alternate gene names: 78066814
Gene position: 2403661-2405592 (Clockwise)
Preceding gene: 78066812
Following gene: 78066818
Centisome position: 65.07
GC content: 67.49
Gene sequence:
>1932_bases GTGATCCGTTTCAATCAGTTCAGCCTTGCGCGCGGCACCAAGCCGCTGTTCGAGTCGACCTCCTTCGTGCTCAATCCCGG CGAGAAAGCCGGCCTGATCGGCGCAAACGGCGCCGGCAAGTCGACCCTGTTCTCGGTCCTGCGCGGCGAGTTGCACTCGG ACGGCGGCGATTTCTCGATGCCGCCGTCGTGGCGGATCGCCCATGTGTCGCAGGAAACGCCCGCGGTCGACCGTTCGGCG CTCGACTACACGCTCGATGGCGACGCCGCGCTGCGCGAGATCGAGGCGCGTATCGCCGCCGCGTCCGCCGCACATGACGG CGCCGCCGAAGCCGACGCGCACGCGGCGTTCGCCGACGCCGACGGCTACACCGCACCTGCCCGCGCCGAGGCGCTGCTGC TCGGCCTCGGCTTCACGCTCGCGCAGACGCGCGAATCCGTCGCCAGCTTCTCCGGCGGCTGGCGCATGCGCCTGAATCTC GCGCAGGCGCTGATGTGCCGTTCCGACCTGCTGCTGCTCGACGAACCGACGAACCACCTCGACCTCGACGCGATCGTCTG GCTCGAAGACTGGCTGCACCGCTACCCCGGCACGCTCGTCGTGATTTCGCACGACCGCGAATTCCTCGATTCGATCTGCA ACGTCACGCTGCACCTGGAAAACCGCCAGGTGAAGCGCTATGGCGGCAACTACTCGCAGTTCGAAGTGCTGCGCGCGCAG CAACTGGCGCTGCAGCAAAGCGCCTACGAAAAGCAGCAGAAGACGATCGAGCACCTGCAGAGCTTCGTCGACCGCTTCAA GGCCAAGGCGACCAAGGCCAAGCAGGCGCAGAGCCGGATGAAGGCGCTCGAGAAGATGGAGCTGATCGCGCCCGCGCACA TCGCGTCGCCGTTCACGTTCGAATTCCGCATGCCCGATGCCGCGCCGAACCCGATGATGGTGATGGAAGACGTCCGCTGC GGCTACCACGCCGACGGCGGAGCGGAAATCCCGATCGTCGAGCGCGTCGCGCTGTCGATCCAGAACGGCCAGCGCATCGG CCTGCTCGGCGCGAACGGCCAGGGCAAGTCGACGCTGATCAAGACGCTGGCCGGTACGCTCGCGCCGCTGTCGGGGCACG TCCGCGACGGCAAGGGGCTGACGATCGGCTATTTCGCGCAGCACCAGCTCGAAACGCTGCGCGAGGACGATTCGCCGCTC GCGCATCTGGCGCGGCTCGCGCCCGACACGCGCGAGCAGGAGCTGCGCGACTTCCTCGGCGGCTTCAACTTCTCGGGCGA CATGGCGACCACCCCGGTCGGGCCGTTTTCGGGCGGTGAAAAGGCTCGCCTCGCGCTCGCGCTGATCATCTGGCAGAAGC CGAACCTGCTGCTGCTCGACGAACCGACCAACCACCTCGACCTCGAAACCCGTCATGCGCTGACGATGGCGCTCGCGCAG TTCGAAGGCACGCTGATCCTCGTCTCGCACGACCGCCACCTGCTGCGCGCGACGACCGACCAGTTCATGCTGGTCGCGAA GCACCGGCTGCAGCCGTTCGACGGCGACCTCGACGACTACCGCGACTGGCTGCTGCAGCACGCGGCCGAGCAGCGCGCCG CCGCGAAGGCCGACAGCGCGGCTTCATCGGGCGCGGGCGCCGCGGCCAATCGCAAGGACCAGAAGCGTCAGGCCGCCGAG GAGCGGCAGCGCCTGTCGGTGTTGAAGAAGCCGCTGCAGACGCGCATCACGAAGCTCGAAAAGGAAATGGAGACGCTGCA CGCGGAGAAGGCGCGCCTCGACACATTCGTCGCCGATCCAGCGAGCTACGAAGCCGAGCGCAAGACGGAACTGACCGATG CGATCCGCAAGCTCGGCGACGTCAACACGCGTCTCGAAACGGTCGAGGCCGACTGGCTCGCCGCGCAGGAAGAGCTCGAG CAGATCGGCTGA
Upstream 100 bases:
>100_bases TCTAGGCGAAATTGCCCCGTTGCGGCATCCGCCGAACGGCCAATGCCCGGCGCGAGCGGCGCGCAGTCTAGAATAGCGGT TTTGGCCAGTCATTTCCGCC
Downstream 100 bases:
>100_bases CAGCCGTCGCGGTGCGGCCGGCCGATACCGATGCGCCGGTCAGCCCGGCATCCCGGCTGCCTTGGAGCAGCGGTACCTTG GTATCGCTGCCCCTCGACAG
Product: ABC transporter, fused ATPase subunits
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MIRFNQFSLARGTKPLFESTSFVLNPGEKAGLIGANGAGKSTLFSVLRGELHSDGGDFSMPPSWRIAHVSQETPAVDRSA LDYTLDGDAALREIEARIAAASAAHDGAAEADAHAAFADADGYTAPARAEALLLGLGFTLAQTRESVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLVVISHDREFLDSICNVTLHLENRQVKRYGGNYSQFEVLRAQ QLALQQSAYEKQQKTIEHLQSFVDRFKAKATKAKQAQSRMKALEKMELIAPAHIASPFTFEFRMPDAAPNPMMVMEDVRC GYHADGGAEIPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGHVRDGKGLTIGYFAQHQLETLREDDSPL AHLARLAPDTREQELRDFLGGFNFSGDMATTPVGPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKADSAASSGAGAAANRKDQKRQAAE ERQRLSVLKKPLQTRITKLEKEMETLHAEKARLDTFVADPASYEAERKTELTDAIRKLGDVNTRLETVEADWLAAQEELE QIG
Sequences:
>Translated_643_residues MIRFNQFSLARGTKPLFESTSFVLNPGEKAGLIGANGAGKSTLFSVLRGELHSDGGDFSMPPSWRIAHVSQETPAVDRSA LDYTLDGDAALREIEARIAAASAAHDGAAEADAHAAFADADGYTAPARAEALLLGLGFTLAQTRESVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLVVISHDREFLDSICNVTLHLENRQVKRYGGNYSQFEVLRAQ QLALQQSAYEKQQKTIEHLQSFVDRFKAKATKAKQAQSRMKALEKMELIAPAHIASPFTFEFRMPDAAPNPMMVMEDVRC GYHADGGAEIPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGHVRDGKGLTIGYFAQHQLETLREDDSPL AHLARLAPDTREQELRDFLGGFNFSGDMATTPVGPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKADSAASSGAGAAANRKDQKRQAAE ERQRLSVLKKPLQTRITKLEKEMETLHAEKARLDTFVADPASYEAERKTELTDAIRKLGDVNTRLETVEADWLAAQEELE QIG >Mature_643_residues MIRFNQFSLARGTKPLFESTSFVLNPGEKAGLIGANGAGKSTLFSVLRGELHSDGGDFSMPPSWRIAHVSQETPAVDRSA LDYTLDGDAALREIEARIAAASAAHDGAAEADAHAAFADADGYTAPARAEALLLGLGFTLAQTRESVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLVVISHDREFLDSICNVTLHLENRQVKRYGGNYSQFEVLRAQ QLALQQSAYEKQQKTIEHLQSFVDRFKAKATKAKQAQSRMKALEKMELIAPAHIASPFTFEFRMPDAAPNPMMVMEDVRC GYHADGGAEIPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGHVRDGKGLTIGYFAQHQLETLREDDSPL AHLARLAPDTREQELRDFLGGFNFSGDMATTPVGPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKADSAASSGAGAAANRKDQKRQAAE ERQRLSVLKKPLQTRITKLEKEMETLHAEKARLDTFVADPASYEAERKTELTDAIRKLGDVNTRLETVEADWLAAQEELE QIG
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=38.5767790262172, Blast_Score=355, Evalue=1e-97, Organism=Homo sapiens, GI27881506, Length=531, Percent_Identity=36.9114877589454, Blast_Score=327, Evalue=3e-89, Organism=Homo sapiens, GI10947137, Length=531, Percent_Identity=36.9114877589454, Blast_Score=326, Evalue=3e-89, Organism=Homo sapiens, GI10947135, Length=545, Percent_Identity=32.8440366972477, Blast_Score=255, Evalue=9e-68, Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=32.8440366972477, Blast_Score=255, Evalue=1e-67, Organism=Homo sapiens, GI150417984, Length=202, Percent_Identity=31.1881188118812, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1789751, Length=642, Percent_Identity=54.3613707165109, Blast_Score=709, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=37.0998116760829, Blast_Score=335, Evalue=4e-93, Organism=Escherichia coli, GI1787182, Length=647, Percent_Identity=29.0571870170015, Blast_Score=218, Evalue=6e-58, Organism=Escherichia coli, GI2367384, Length=530, Percent_Identity=30.5660377358491, Blast_Score=218, Evalue=9e-58, Organism=Escherichia coli, GI1788165, Length=183, Percent_Identity=32.7868852459016, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI87081782, Length=539, Percent_Identity=24.30426716141, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790190, Length=228, Percent_Identity=24.5614035087719, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=31.6582914572864, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787758, Length=182, Percent_Identity=26.3736263736264, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1786253, Length=197, Percent_Identity=28.4263959390863, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17553372, Length=534, Percent_Identity=35.9550561797753, Blast_Score=329, Evalue=3e-90, Organism=Caenorhabditis elegans, GI17555318, Length=530, Percent_Identity=35.2830188679245, Blast_Score=319, Evalue=2e-87, Organism=Caenorhabditis elegans, GI17559834, Length=566, Percent_Identity=31.4487632508834, Blast_Score=289, Evalue=3e-78, Organism=Caenorhabditis elegans, GI71992285, Length=208, Percent_Identity=25, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17565586, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=556, Percent_Identity=33.8129496402878, Blast_Score=321, Evalue=2e-88, Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=32.2160148975791, Blast_Score=289, Evalue=8e-79, Organism=Saccharomyces cerevisiae, GI6324314, Length=386, Percent_Identity=31.0880829015544, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6325030, Length=391, Percent_Identity=31.7135549872123, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6323278, Length=386, Percent_Identity=28.7564766839378, Blast_Score=147, Evalue=4e-36, Organism=Drosophila melanogaster, GI24666836, Length=530, Percent_Identity=37.3584905660377, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24642252, Length=547, Percent_Identity=37.4771480804388, Blast_Score=344, Evalue=9e-95, Organism=Drosophila melanogaster, GI18859989, Length=547, Percent_Identity=37.4771480804388, Blast_Score=344, Evalue=9e-95, Organism=Drosophila melanogaster, GI24641342, Length=546, Percent_Identity=32.7838827838828, Blast_Score=304, Evalue=1e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 70820; Mature: 70820
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFNQFSLARGTKPLFESTSFVLNPGEKAGLIGANGAGKSTLFSVLRGELHSDGGDFSM CCEECCCHHCCCCCHHHHCCCEEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC PPSWRIAHVSQETPAVDRSALDYTLDGDAALREIEARIAAASAAHDGAAEADAHAAFADA CCCCEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC DGYTAPARAEALLLGLGFTLAQTRESVASFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL CCCCCCHHHHEEHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAIVWLEDWLHRYPGTLVVISHDREFLDSICNVTLHLENRQVKRYGGNYSQFEVLRAQ CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCCHHHHHCCCHHHHHHHHHH QLALQQSAYEKQQKTIEHLQSFVDRFKAKATKAKQAQSRMKALEKMELIAPAHIASPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE EFRMPDAAPNPMMVMEDVRCGYHADGGAEIPIVERVALSIQNGQRIGLLGANGQGKSTLI EEECCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHH KTLAGTLAPLSGHVRDGKGLTIGYFAQHQLETLREDDSPLAHLARLAPDTREQELRDFLG HHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHC GFNFSGDMATTPVGPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ CCCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHH FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKADSA HCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC ASSGAGAAANRKDQKRQAAEERQRLSVLKKPLQTRITKLEKEMETLHAEKARLDTFVADP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASYEAERKTELTDAIRKLGDVNTRLETVEADWLAAQEELEQIG CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIRFNQFSLARGTKPLFESTSFVLNPGEKAGLIGANGAGKSTLFSVLRGELHSDGGDFSM CCEECCCHHCCCCCHHHHCCCEEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC PPSWRIAHVSQETPAVDRSALDYTLDGDAALREIEARIAAASAAHDGAAEADAHAAFADA CCCCEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC DGYTAPARAEALLLGLGFTLAQTRESVASFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL CCCCCCHHHHEEHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAIVWLEDWLHRYPGTLVVISHDREFLDSICNVTLHLENRQVKRYGGNYSQFEVLRAQ CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCCHHHHHCCCHHHHHHHHHH QLALQQSAYEKQQKTIEHLQSFVDRFKAKATKAKQAQSRMKALEKMELIAPAHIASPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE EFRMPDAAPNPMMVMEDVRCGYHADGGAEIPIVERVALSIQNGQRIGLLGANGQGKSTLI EEECCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHH KTLAGTLAPLSGHVRDGKGLTIGYFAQHQLETLREDDSPLAHLARLAPDTREQELRDFLG HHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHC GFNFSGDMATTPVGPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ CCCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHH FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKADSA HCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC ASSGAGAAANRKDQKRQAAEERQRLSVLKKPLQTRITKLEKEMETLHAEKARLDTFVADP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASYEAERKTELTDAIRKLGDVNTRLETVEADWLAAQEELEQIG CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]