| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is cdsA [H]
Identifier: 78066793
GI number: 78066793
Start: 2377161
End: 2377982
Strand: Reverse
Name: cdsA [H]
Synonym: Bcep18194_A5324
Alternate gene names: 78066793
Gene position: 2377982-2377161 (Counterclockwise)
Preceding gene: 78066794
Following gene: 78066792
Centisome position: 64.37
GC content: 68.98
Gene sequence:
>822_bases ATGCTGAAAACCCGTGTGATCACGGCGATCGTGATGCTGGCGGTCCTGCTGCCGGTGACGCTGTTCGCGCCGCTCACCGC GTTCGGCGCGCTGATTGGCGTCGTGCTGGTGTTTGCCGCGTGGGAATGGGCGCGCCTGCTCAAGCTCGGCGGCGCCGGCC CGGTCATCTATGCAGTCGTCGCGGCGCTGGCGCTCGCGGCAACGGCGCCGCTCGGCGTCGATGCGGCCTCGTCCCGTCCC CTTTTCATGGCAGCCGGCGTGTTCTGGCTGCTGGTCGGCCCGTTCACGCTGCGGCGCAAGCCGGCGCTTGCGGGCGGCGT ATGGCGGCCGTTCCTGCTCGCGGCCGGCCTCGTGGTCTTTGCGGCCTGCTGGCATGCGCTCGTCGCGGCGCGTGCGCAGG GCGTGCCGTTCGTGCTGTCGCTGCTTCTGGTCGTCTGGCTCGCCGATATCGGTGCATACTTCGCGGGCAAGGCTTTTGGA AAGCGTAAACTGGCCATCACGATCAGCCCCGGCAAGAGCTGGGAAGGCGCGATCGGTGGCTGGCTCGCCGTGATGGTCGT CGCCGGTGTCGCGATGGCCGCGCATGCGTTCGAGCCGACCCTGTTTTCCGCGTTCGCCGTGCGCTACGGGATGCCCGGCG CATGGGCCGCACTGACGCTGCTGGTCGCGTATAGCGTGATCGGCGACCTGTTCGAGTCGCTGCTGAAGCGGCAGGCGGGC GTGAAGGATTCGAGCGGACTGCTGCCTGGCCATGGCGGCGTGCTCGACCGTGTCGACGCGCTGCTGCCGGTGCTGCCGCT CGCGATGCTGCTGCTTGGTTAA
Upstream 100 bases:
>100_bases CACTGGCCGACGCAATGGCGTCGTATACGGAGCGCGAGCGCCGCTTCGGCCGCACGAGCGCACAGCTCGAACCGCAATCG CAGAACGCCGACTCCCTTTC
Downstream 100 bases:
>100_bases ACCATTATTTCTGTTATGCAAAAACGTCTGACATTGCTCGGTTCCACGGGCTCGATCGGAGACAGCACGCTCGACGTGGT CGCGCGCCATCCCGAGCGCT
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLKTRVITAIVMLAVLLPVTLFAPLTAFGALIGVVLVFAAWEWARLLKLGGAGPVIYAVVAALALAATAPLGVDAASSRP LFMAAGVFWLLVGPFTLRRKPALAGGVWRPFLLAAGLVVFAACWHALVAARAQGVPFVLSLLLVVWLADIGAYFAGKAFG KRKLAITISPGKSWEGAIGGWLAVMVVAGVAMAAHAFEPTLFSAFAVRYGMPGAWAALTLLVAYSVIGDLFESLLKRQAG VKDSSGLLPGHGGVLDRVDALLPVLPLAMLLLG
Sequences:
>Translated_273_residues MLKTRVITAIVMLAVLLPVTLFAPLTAFGALIGVVLVFAAWEWARLLKLGGAGPVIYAVVAALALAATAPLGVDAASSRP LFMAAGVFWLLVGPFTLRRKPALAGGVWRPFLLAAGLVVFAACWHALVAARAQGVPFVLSLLLVVWLADIGAYFAGKAFG KRKLAITISPGKSWEGAIGGWLAVMVVAGVAMAAHAFEPTLFSAFAVRYGMPGAWAALTLLVAYSVIGDLFESLLKRQAG VKDSSGLLPGHGGVLDRVDALLPVLPLAMLLLG >Mature_273_residues MLKTRVITAIVMLAVLLPVTLFAPLTAFGALIGVVLVFAAWEWARLLKLGGAGPVIYAVVAALALAATAPLGVDAASSRP LFMAAGVFWLLVGPFTLRRKPALAGGVWRPFLLAAGLVVFAACWHALVAARAQGVPFVLSLLLVVWLADIGAYFAGKAFG KRKLAITISPGKSWEGAIGGWLAVMVVAGVAMAAHAFEPTLFSAFAVRYGMPGAWAALTLLVAYSVIGDLFESLLKRQAG VKDSSGLLPGHGGVLDRVDALLPVLPLAMLLLG
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=300, Percent_Identity=32.6666666666667, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1787677, Length=120, Percent_Identity=39.1666666666667, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28349; Mature: 28349
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTRVITAIVMLAVLLPVTLFAPLTAFGALIGVVLVFAAWEWARLLKLGGAGPVIYAVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AALALAATAPLGVDAASSRPLFMAAGVFWLLVGPFTLRRKPALAGGVWRPFLLAAGLVVF HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCHHCCHHHHHHHHHHHHHH AACWHALVAARAQGVPFVLSLLLVVWLADIGAYFAGKAFGKRKLAITISPGKSWEGAIGG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH WLAVMVVAGVAMAAHAFEPTLFSAFAVRYGMPGAWAALTLLVAYSVIGDLFESLLKRQAG HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VKDSSGLLPGHGGVLDRVDALLPVLPLAMLLLG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLKTRVITAIVMLAVLLPVTLFAPLTAFGALIGVVLVFAAWEWARLLKLGGAGPVIYAVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AALALAATAPLGVDAASSRPLFMAAGVFWLLVGPFTLRRKPALAGGVWRPFLLAAGLVVF HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCHHCCHHHHHHHHHHHHHH AACWHALVAARAQGVPFVLSLLLVVWLADIGAYFAGKAFGKRKLAITISPGKSWEGAIGG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH WLAVMVVAGVAMAAHAFEPTLFSAFAVRYGMPGAWAALTLLVAYSVIGDLFESLLKRQAG HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VKDSSGLLPGHGGVLDRVDALLPVLPLAMLLLG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8654980; 10984043 [H]