| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ppsA [H]
Identifier: 78066781
GI number: 78066781
Start: 2362811
End: 2365213
Strand: Reverse
Name: ppsA [H]
Synonym: Bcep18194_A5312
Alternate gene names: 78066781
Gene position: 2365213-2362811 (Counterclockwise)
Preceding gene: 78066783
Following gene: 78066780
Centisome position: 64.03
GC content: 63.34
Gene sequence:
>2403_bases ATGACTAACGCAGCAAACGTCGCAAAGGACCAGGCGTATGTAATTCCGTTCGAGCAGTTGCGGATGACCGATGTGGAGAT CGTCGGCGGCAAGAATGCGTCGCTTGGCGAAATGATCAGCCAGCTTTCCGAAGCAGGCGTTCGCGTACCCACCGGTTTCG CCACGACCGCGCTCGCGTTCCGCGATTTCCTCACGCACAACGACCTTACCGACCGCATCGCCAAGCGTCTCGAGTCGCTC GACATCGACGACGTGAAGGCGCTCGCCGAAGCCGGGGCCGAAATCCGCAAGTGGATCGTCGATGCGCCGATGCAGGCACG TCTCGAGCAGGAAATCCGTGAACAGTTCGAAATCCTGAAGAACAGCTCGCCGGGCGAGCTGTCGTTCGCCGTGCGTTCGT CCGCGACCGCGGAAGACCTGCCCGACGCATCGTTCGCCGGCCAGCAGGAGTCGTACCTGAACGTCGTCGGCATCGAAGAC GTGCTCGACCGCATGAAGCACGTGTTCGCGTCGCTGTACAACGACCGCGCGATCTCGTATCGCGTGCACAAGGGCTTCAC GCACGCGGAAGTCGCCCTGTCGGCCGGCGTGCAGCGCATGGTCCGCTCGGACGTCGGCGCCGCCGGCGTGATGTTCACGA TCGACACCGAATCGGGCTTCAAGGACGCCGTGTTCATCACGTCGAGCTACGGCCTGGGCGAAACCGTCGTGCAGGGCGCA GTGAACCCGGACGAGTTCTATGTGTTCAAGACGACGCTCGCACAGGACAAGTACCCGATCATCCGCCGCTCGATCGGCTC GAAGCTGATCAAGATGGAATTCACGCAGCCGGGCGAGCCGGGCCGCGTGAAGACGGTCGACGTGCCGCACGAGCAGCGCA ACCGCTACTCGATCACCGACGAAGACGTGATCGAGCTGGCGAAGTACGCGGTCATCATCGAGAAGCACTACCAGCGTCCG ATGGACATCGAGTGGGGCAAGGACGGCCGCGACGGCAAGATCTTCATCCTGCAGGCACGCCCGGAAACCGTGAAGAGCCA GGCGACCGGCAAGGCCGAACAGCGCTTCAAGCTGAAGGGCCAGTCGCAGGTGCTCGCGACGGGTCGTGCGATCGGCCAGA AGATCGGTGCGGGCCCCGTGCGCGTGATCCAGGATCCGTCGGAAATGGAACGCGTGCAGCCGGGCGACGTGCTGGTGGCC GACATGACCGACCCGAACTGGGAGCCGGTGATGAAGCGTGCAGCCGCGATCGTCACGAACCGTGGCGGCCGCACCTGCCA CGCGGCGATCATCGCGCGTGAACTCGGCGTGCCGGCAGTCGTCGGCTGCGGCGATGCGACCGACATCCTGAAGGACGGCG CGCTGGTTACCGTGTCGTGCGCGGAAGGCGACGAAGGCAAGATCTACGACGGCCTGCTCGAGACGGAAGTCACGGAAGTG CAGCGCGGCGAACTGCCGGAAATCCCGGTCAAGATCATGATGAACGTCGGCAACCCGCAGCTCGCGTTCGACTTCTCGCA ACTGCCGAACGGCGGCGTGGGTCTCGCGCGTCTCGAGTTCATCATCAACAACAACATCGGCGTTCACCCGAAGGCGATCC TCGAGTACCCGAACATCGACCAGGACCTGAAGAAGGCCGTCGAGAGCGTCGCGCGCGGTCACGCATCGCCGCGTCAGTTC TACGTCGACAAGCTGACGGAAGGTGTCGCGACGATCGCGGCGGCGTTCTATCCGAAGCCCGTCATCGTGCGTCTGTCCGA CTTCAAGTCGAACGAGTACAAGAAGCTGATCGGCGGTTCGCGTTACGAGCCGGACGAGGAAAACCCGATGCTGGGCTTCC GCGGCGCGTCGCGTTACATCGCTGAAGACTTCGCGCAGGCGTTCGAAATGGAGTGCCGTGCACTGAAGCGCGTGCGCGAC GAGATGGGCCTGACCAACGTCGAGATCATGGTGCCGTTCGTGCGTACCGTGAAGCAGGCGGAGCGTGTCGTCGGTCTGCT CGAGAAGTTCGGTCTGAAGCGCGGCGAAAATGGCCTGCGCCTCGTGATGATGTGCGAAGTCCCGACCAACGCGATCCTCG CCGAAGACTTCCTGCAGTTCTTCGACGGTTTCTCGATCGGCTCGAACGACCTCACGCAGCTCACGCTCGGCCTCGACCGC GATTCGGGTATGGAACTGCTGGCTGTCGACTTCGACGAACGCGACCCGGCGGTCAAGTTCCTGCTGAAGCGCGCGATCGA CACCTGCCGCAAGATGGGCAAGTACGTCGGTATCTGCGGCCAGGGCCCGTCCGATCACCCGGACTTCGCGCAATGGCTGA CGGACGAAGGCATCGTGTCGATCTCGCTGAACCCCGACACGATCATCGATACGTGGCAGGCGCTCGCCGCCAACCGGAAG TAA
Upstream 100 bases:
>100_bases TCTCCAACAGGTTGCGCAAGACGCGTCGCGCCTTTTTGCAAGCGCCCGCGTCCAAGCCCACTTGCGCAATCGAGCATTTT TTTCACACTTAGGGGCTTGT
Downstream 100 bases:
>100_bases CGGTCGGTAACTTGCCATCGACGAAGGAGCGGCGCTGCTGCTCCTTCAGTGAAGGCAAATTGCAAGGTTCATGCTATAAA CACCCCGGTAGATACCGGGG
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 800; Mature: 799
Protein sequence:
>800_residues MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAFRDFLTHNDLTDRIAKRLESL DIDDVKALAEAGAEIRKWIVDAPMQARLEQEIREQFEILKNSSPGELSFAVRSSATAEDLPDASFAGQQESYLNVVGIED VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFITSSYGLGETVVQGA VNPDEFYVFKTTLAQDKYPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVPHEQRNRYSITDEDVIELAKYAVIIEKHYQRP MDIEWGKDGRDGKIFILQARPETVKSQATGKAEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVA DMTDPNWEPVMKRAAAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDILKDGALVTVSCAEGDEGKIYDGLLETEVTEV QRGELPEIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNIDQDLKKAVESVARGHASPRQF YVDKLTEGVATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECRALKRVRD EMGLTNVEIMVPFVRTVKQAERVVGLLEKFGLKRGENGLRLVMMCEVPTNAILAEDFLQFFDGFSIGSNDLTQLTLGLDR DSGMELLAVDFDERDPAVKFLLKRAIDTCRKMGKYVGICGQGPSDHPDFAQWLTDEGIVSISLNPDTIIDTWQALAANRK
Sequences:
>Translated_800_residues MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAFRDFLTHNDLTDRIAKRLESL DIDDVKALAEAGAEIRKWIVDAPMQARLEQEIREQFEILKNSSPGELSFAVRSSATAEDLPDASFAGQQESYLNVVGIED VLDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFITSSYGLGETVVQGA VNPDEFYVFKTTLAQDKYPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVPHEQRNRYSITDEDVIELAKYAVIIEKHYQRP MDIEWGKDGRDGKIFILQARPETVKSQATGKAEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVA DMTDPNWEPVMKRAAAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDILKDGALVTVSCAEGDEGKIYDGLLETEVTEV QRGELPEIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNIDQDLKKAVESVARGHASPRQF YVDKLTEGVATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECRALKRVRD EMGLTNVEIMVPFVRTVKQAERVVGLLEKFGLKRGENGLRLVMMCEVPTNAILAEDFLQFFDGFSIGSNDLTQLTLGLDR DSGMELLAVDFDERDPAVKFLLKRAIDTCRKMGKYVGICGQGPSDHPDFAQWLTDEGIVSISLNPDTIIDTWQALAANRK >Mature_799_residues TNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAFRDFLTHNDLTDRIAKRLESLD IDDVKALAEAGAEIRKWIVDAPMQARLEQEIREQFEILKNSSPGELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDV LDRMKHVFASLYNDRAISYRVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFITSSYGLGETVVQGAV NPDEFYVFKTTLAQDKYPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVPHEQRNRYSITDEDVIELAKYAVIIEKHYQRPM DIEWGKDGRDGKIFILQARPETVKSQATGKAEQRFKLKGQSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVAD MTDPNWEPVMKRAAAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDILKDGALVTVSCAEGDEGKIYDGLLETEVTEVQ RGELPEIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNIDQDLKKAVESVARGHASPRQFY VDKLTEGVATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAQAFEMECRALKRVRDE MGLTNVEIMVPFVRTVKQAERVVGLLEKFGLKRGENGLRLVMMCEVPTNAILAEDFLQFFDGFSIGSNDLTQLTLGLDRD SGMELLAVDFDERDPAVKFLLKRAIDTCRKMGKYVGICGQGPSDHPDFAQWLTDEGIVSISLNPDTIIDTWQALAANRK
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=788, Percent_Identity=64.7208121827411, Blast_Score=1047, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=399, Percent_Identity=26.3157894736842, Blast_Score=102, Evalue=7e-23, Organism=Escherichia coli, GI1788726, Length=192, Percent_Identity=32.2916666666667, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI48994992, Length=411, Percent_Identity=25.3041362530414, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17564524, Length=237, Percent_Identity=31.6455696202532, Blast_Score=100, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 88201; Mature: 88069
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAF CCCCCCCCCCCEEEEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH RDFLTHNDLTDRIAKRLESLDIDDVKALAEAGAEIRKWIVDAPMQARLEQEIREQFEILK HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH NSSPGELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDVLDRMKHVFASLYNDRAISY CCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEE RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFITSSYGLGETVVQGA EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHCC VNPDEFYVFKTTLAQDKYPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVPHEQRNRYSITD CCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEECCHHHCCCCCCCH EDVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQATGKAEQRFKLKG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCHHHHEEECC QSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVADMTDPNWEPVMKRAAAIVTN CCHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCC RGGRTCHAAIIARELGVPAVVGCGDATDILKDGALVTVSCAEGDEGKIYDGLLETEVTEV CCCCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHH QRGELPEIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNID HCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCC QDLKKAVESVARGHASPRQFYVDKLTEGVATIAAAFYPKPVIVRLSDFKSNEYKKLIGGS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC RYEPDEENPMLGFRGASRYIAEDFAQAFEMECRALKRVRDEMGLTNVEIMVPFVRTVKQA CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH ERVVGLLEKFGLKRGENGLRLVMMCEVPTNAILAEDFLQFFDGFSIGSNDLTQLTLGLDR HHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC DSGMELLAVDFDERDPAVKFLLKRAIDTCRKMGKYVGICGQGPSDHPDFAQWLTDEGIVS CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHCCCCEEE ISLNPDTIIDTWQALAANRK EECCCCHHHHHHHHHHCCCC >Mature Secondary Structure TNAANVAKDQAYVIPFEQLRMTDVEIVGGKNASLGEMISQLSEAGVRVPTGFATTALAF CCCCCCCCCCEEEEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH RDFLTHNDLTDRIAKRLESLDIDDVKALAEAGAEIRKWIVDAPMQARLEQEIREQFEILK HHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH NSSPGELSFAVRSSATAEDLPDASFAGQQESYLNVVGIEDVLDRMKHVFASLYNDRAISY CCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEE RVHKGFTHAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDAVFITSSYGLGETVVQGA EECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHCC VNPDEFYVFKTTLAQDKYPIIRRSIGSKLIKMEFTQPGEPGRVKTVDVPHEQRNRYSITD CCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEECCHHHCCCCCCCH EDVIELAKYAVIIEKHYQRPMDIEWGKDGRDGKIFILQARPETVKSQATGKAEQRFKLKG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCHHHHEEECC QSQVLATGRAIGQKIGAGPVRVIQDPSEMERVQPGDVLVADMTDPNWEPVMKRAAAIVTN CCHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCC RGGRTCHAAIIARELGVPAVVGCGDATDILKDGALVTVSCAEGDEGKIYDGLLETEVTEV CCCCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHH QRGELPEIPVKIMMNVGNPQLAFDFSQLPNGGVGLARLEFIINNNIGVHPKAILEYPNID HCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCC QDLKKAVESVARGHASPRQFYVDKLTEGVATIAAAFYPKPVIVRLSDFKSNEYKKLIGGS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCC RYEPDEENPMLGFRGASRYIAEDFAQAFEMECRALKRVRDEMGLTNVEIMVPFVRTVKQA CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH ERVVGLLEKFGLKRGENGLRLVMMCEVPTNAILAEDFLQFFDGFSIGSNDLTQLTLGLDR HHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC DSGMELLAVDFDERDPAVKFLLKRAIDTCRKMGKYVGICGQGPSDHPDFAQWLTDEGIVS CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHCCCCEEE ISLNPDTIIDTWQALAANRK EECCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]