| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066738
Identifier: 78066738
GI number: 78066738
Start: 2325409
End: 2326602
Strand: Direct
Name: 78066738
Synonym: Bcep18194_A5269
Alternate gene names: NA
Gene position: 2325409-2326602 (Clockwise)
Preceding gene: 78066737
Following gene: 78066741
Centisome position: 62.95
GC content: 63.74
Gene sequence:
>1194_bases ATGGAAGGCTTCATCACCGACTGGCTGAACCTCGCGCTGCGATGGCTGCACGTCATCGTCGCCATTGCGTGGATCGGCGA GTCGTTCTATTTCGTCGCGCTCGACAACAGCCTGAAACCGCCGACCGACCCGAACCAGCGCAAGCGCGGTGTGTTCGGCG AACTGTGGCACGTCCACGGTGGCGGTTTCTACAACATGCAGAAGTACACGGTCGCTCCGCCGGAAATGCCGGATGACCTG CACTGGTCGAAGTGGCCGTCGTACACGACCTGGCTGTCGGGTTTCTCGCTGTTCTTCGTGCTGTACCTGCTCGCGCCGAA CACGTACCTGATCGACAAGAGCGTGCTCGACATGGGCCCGGTGGTCGCCGTCGCTTCCGCACTCGGCTTCCTCGCCGCCG GCTGGATCGTCTACGACTCGCTGTGCCGCATCCTCGGCACCAATGACCGCGTGCTCGGCATCTGCGTCGGCATCTACGTG GTCGCCGCCGCCTACCTCGCGTGCCACATCTTCGCGGGTCGTGCTGCCTACCTGATCGTCGGTGCGATGCTCGCGACGAT CATGTCGGCGAACGTGTTCTTCGTGATCATCCCCGGCCAGCGCAAGATGGTCGACAAGATGCTCAAGGGCGAAGAGCCGA ACCCGATCTACGGCAAGCGCGGCAAGCAGCGCTCGGTGCACAACACGTACTTCACGCTGCCGGTCGTGTTCGCGATGCTG TCGAACCACTACGCGATGACCTACACGAACAAGTTCAACTGGGTCGTGCTCGTGATGATCATGCTGGCCGGCGCGCTGAT CCGCCAGTTCTTCGTGATGCGTCACCGCGGCAAGCAGCTGTGGTACCTGCCGATCGGCGGCGTCGCTCTGCTGTCGGCCG CGCTGGTCTGGACGATGCCGAAGCCGGTCGCACCGGAAGCGCAAGCCGCGAACGCACCGAAGGTCGTGATCGCCGACATC ATGCCGGTCCTGCAGCAGCGGTGTGTGGAGTGCCACTCGGCGAAGCCGACGCTGATGGGCAGCGCGCCCGCGGGCGTGAT GTTCGACACGCCGGACGAAGTGTCGAAGAACGCTCAGCGTATCTACGAACAGGCCGTGCGCCTGAAGGCGATGCCGATCG GCAACGTCACGCACATGACCGACGACGAGCGCACGAAGCTCGCCGCGTGGTTCGAGGGTGGCGCGAACAAGTAA
Upstream 100 bases:
>100_bases CCGCTGCTCGTGTCGCCGTGGTCGTACAGCACCTATCGCGGCAGCTGACATTCGAATCAGCGCCCGCATCAAACAAACGA TTTGAGTCTGGAGGAGTTTC
Downstream 100 bases:
>100_bases GCCGCCGTGCGCCGGGATCGTTTTCCCGCGCAATCCTTTCCGTTCGCGGGCCCGGTGACGGGCCCGTTTTTTTTGCGTGT CCCGGACACCCTTCGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MEGFITDWLNLALRWLHVIVAIAWIGESFYFVALDNSLKPPTDPNQRKRGVFGELWHVHGGGFYNMQKYTVAPPEMPDDL HWSKWPSYTTWLSGFSLFFVLYLLAPNTYLIDKSVLDMGPVVAVASALGFLAAGWIVYDSLCRILGTNDRVLGICVGIYV VAAAYLACHIFAGRAAYLIVGAMLATIMSANVFFVIIPGQRKMVDKMLKGEEPNPIYGKRGKQRSVHNTYFTLPVVFAML SNHYAMTYTNKFNWVVLVMIMLAGALIRQFFVMRHRGKQLWYLPIGGVALLSAALVWTMPKPVAPEAQAANAPKVVIADI MPVLQQRCVECHSAKPTLMGSAPAGVMFDTPDEVSKNAQRIYEQAVRLKAMPIGNVTHMTDDERTKLAAWFEGGANK
Sequences:
>Translated_397_residues MEGFITDWLNLALRWLHVIVAIAWIGESFYFVALDNSLKPPTDPNQRKRGVFGELWHVHGGGFYNMQKYTVAPPEMPDDL HWSKWPSYTTWLSGFSLFFVLYLLAPNTYLIDKSVLDMGPVVAVASALGFLAAGWIVYDSLCRILGTNDRVLGICVGIYV VAAAYLACHIFAGRAAYLIVGAMLATIMSANVFFVIIPGQRKMVDKMLKGEEPNPIYGKRGKQRSVHNTYFTLPVVFAML SNHYAMTYTNKFNWVVLVMIMLAGALIRQFFVMRHRGKQLWYLPIGGVALLSAALVWTMPKPVAPEAQAANAPKVVIADI MPVLQQRCVECHSAKPTLMGSAPAGVMFDTPDEVSKNAQRIYEQAVRLKAMPIGNVTHMTDDERTKLAAWFEGGANK >Mature_397_residues MEGFITDWLNLALRWLHVIVAIAWIGESFYFVALDNSLKPPTDPNQRKRGVFGELWHVHGGGFYNMQKYTVAPPEMPDDL HWSKWPSYTTWLSGFSLFFVLYLLAPNTYLIDKSVLDMGPVVAVASALGFLAAGWIVYDSLCRILGTNDRVLGICVGIYV VAAAYLACHIFAGRAAYLIVGAMLATIMSANVFFVIIPGQRKMVDKMLKGEEPNPIYGKRGKQRSVHNTYFTLPVVFAML SNHYAMTYTNKFNWVVLVMIMLAGALIRQFFVMRHRGKQLWYLPIGGVALLSAALVWTMPKPVAPEAQAANAPKVVIADI MPVLQQRCVECHSAKPTLMGSAPAGVMFDTPDEVSKNAQRIYEQAVRLKAMPIGNVTHMTDDERTKLAAWFEGGANK
Specific function: Unknown
COG id: COG3748
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44199; Mature: 44199
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGFITDWLNLALRWLHVIVAIAWIGESFYFVALDNSLKPPTDPNQRKRGVFGELWHVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCHHHHEEECC GGFYNMQKYTVAPPEMPDDLHWSKWPSYTTWLSGFSLFFVLYLLAPNTYLIDKSVLDMGP CCEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHHCCH VVAVASALGFLAAGWIVYDSLCRILGTNDRVLGICVGIYVVAAAYLACHIFAGRAAYLIV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH GAMLATIMSANVFFVIIPGQRKMVDKMLKGEEPNPIYGKRGKQRSVHNTYFTLPVVFAML HHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SNHYAMTYTNKFNWVVLVMIMLAGALIRQFFVMRHRGKQLWYLPIGGVALLSAALVWTMP HCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCC KPVAPEAQAANAPKVVIADIMPVLQQRCVECHSAKPTLMGSAPAGVMFDTPDEVSKNAQR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEECCHHHHHHHHHH IYEQAVRLKAMPIGNVTHMTDDERTKLAAWFEGGANK HHHHHHHHCCCCCCCCCCCCCCCHHHHHHEECCCCCC >Mature Secondary Structure MEGFITDWLNLALRWLHVIVAIAWIGESFYFVALDNSLKPPTDPNQRKRGVFGELWHVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCHHHHEEECC GGFYNMQKYTVAPPEMPDDLHWSKWPSYTTWLSGFSLFFVLYLLAPNTYLIDKSVLDMGP CCEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHHCCH VVAVASALGFLAAGWIVYDSLCRILGTNDRVLGICVGIYVVAAAYLACHIFAGRAAYLIV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH GAMLATIMSANVFFVIIPGQRKMVDKMLKGEEPNPIYGKRGKQRSVHNTYFTLPVVFAML HHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SNHYAMTYTNKFNWVVLVMIMLAGALIRQFFVMRHRGKQLWYLPIGGVALLSAALVWTMP HCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCC KPVAPEAQAANAPKVVIADIMPVLQQRCVECHSAKPTLMGSAPAGVMFDTPDEVSKNAQR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEECCHHHHHHHHHH IYEQAVRLKAMPIGNVTHMTDDERTKLAAWFEGGANK HHHHHHHHCCCCCCCCCCCCCCCHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA