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The map label for this gene is 78066707

Identifier: 78066707

GI number: 78066707

Start: 2293962

End: 2294585

Strand: Direct

Name: 78066707

Synonym: Bcep18194_A5238

Alternate gene names: NA

Gene position: 2293962-2294585 (Clockwise)

Preceding gene: 78066702

Following gene: 78066708

Centisome position: 62.1

GC content: 49.36

Gene sequence:

>624_bases
ATGACGATCAAGAGCGGAACCCCTTGTCAGAAATGGATTCCCACCAAGTCGAATAAGTCGGGCCGATGTGATGACAAGAA
GACCCAAGTCAGGCTGCCCTCACCACCTGCCTGCGGAAAATCTGTCGCTCCACTAAAGTTCCCTGGCGCCGAAGCCGATA
TTTCATTTCGCTGTCGCGCCGATCACAAAGGCCCGCATGCGATAAGATGGTCGTCTCACGCGCCACCGCAACGAATTGCA
ACTGCTTACAGGTACACCAGGAAGCTATCGAAGAATATGAAAGAAATCCTCCAGATACTTGATTCGATCGACTGGCCAAC
GAGCGTTACTCGACCTGACATAGAGAATCACTATGACGTTTATCTAGTGGACGACAAGGCCGTTGACGAACTAAACAGCA
AGTACGGCATTTCAATTTTCGGCAGCAAAGACAATAACCGCATCGCAATCCATCGAAACCACACACCCCAACCCGGGGAA
CATCATTTTGTTTTCAATGGGTCTAACAACATTGCCGTTTTAGACGAAAAATCCGCTTTTCGCGGAAAAGTTATTTTTGA
GAATAATTGCCGGTGCGTCCTGATGGGCCATCAGCACGCACTGACCATTCACGCCCACCTTTAG

Upstream 100 bases:

>100_bases
GTGCACTTCTCGCAGCGCTGCTCGAGCGCGACGTCATGGCTGCATCGGGTCATGTCTTGTTCCAAAAACGAAAAAGCCCG
GCGCGCGGCCGGGCGATCAA

Downstream 100 bases:

>100_bases
AAGAAGGCACCCTGATATGGGGACGAGGGGCGCGAACTTACGACTGCAGGATATGGGTGCATGGAGGGCGCACGGTATCA
ATTGGAGATGACTGCCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTIKSGTPCQKWIPTKSNKSGRCDDKKTQVRLPSPPACGKSVAPLKFPGAEADISFRCRADHKGPHAIRWSSHAPPQRIA
TAYRYTRKLSKNMKEILQILDSIDWPTSVTRPDIENHYDVYLVDDKAVDELNSKYGISIFGSKDNNRIAIHRNHTPQPGE
HHFVFNGSNNIAVLDEKSAFRGKVIFENNCRCVLMGHQHALTIHAHL

Sequences:

>Translated_207_residues
MTIKSGTPCQKWIPTKSNKSGRCDDKKTQVRLPSPPACGKSVAPLKFPGAEADISFRCRADHKGPHAIRWSSHAPPQRIA
TAYRYTRKLSKNMKEILQILDSIDWPTSVTRPDIENHYDVYLVDDKAVDELNSKYGISIFGSKDNNRIAIHRNHTPQPGE
HHFVFNGSNNIAVLDEKSAFRGKVIFENNCRCVLMGHQHALTIHAHL
>Mature_206_residues
TIKSGTPCQKWIPTKSNKSGRCDDKKTQVRLPSPPACGKSVAPLKFPGAEADISFRCRADHKGPHAIRWSSHAPPQRIAT
AYRYTRKLSKNMKEILQILDSIDWPTSVTRPDIENHYDVYLVDDKAVDELNSKYGISIFGSKDNNRIAIHRNHTPQPGEH
HFVFNGSNNIAVLDEKSAFRGKVIFENNCRCVLMGHQHALTIHAHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23333; Mature: 23202

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKSGTPCQKWIPTKSNKSGRCDDKKTQVRLPSPPACGKSVAPLKFPGAEADISFRCRA
CCCCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCEEEEEEC
DHKGPHAIRWSSHAPPQRIATAYRYTRKLSKNMKEILQILDSIDWPTSVTRPDIENHYDV
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
YLVDDKAVDELNSKYGISIFGSKDNNRIAIHRNHTPQPGEHHFVFNGSNNIAVLDEKSAF
EEECCHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCC
RGKVIFENNCRCVLMGHQHALTIHAHL
CEEEEEECCCEEEEEECCEEEEEEEEC
>Mature Secondary Structure 
TIKSGTPCQKWIPTKSNKSGRCDDKKTQVRLPSPPACGKSVAPLKFPGAEADISFRCRA
CCCCCCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCEEEEEEC
DHKGPHAIRWSSHAPPQRIATAYRYTRKLSKNMKEILQILDSIDWPTSVTRPDIENHYDV
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
YLVDDKAVDELNSKYGISIFGSKDNNRIAIHRNHTPQPGEHHFVFNGSNNIAVLDEKSAF
EEECCHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCC
RGKVIFENNCRCVLMGHQHALTIHAHL
CEEEEEECCCEEEEEECCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA