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The map label for this gene is omp32 [H]

Identifier: 78066699

GI number: 78066699

Start: 2286561

End: 2287607

Strand: Direct

Name: omp32 [H]

Synonym: Bcep18194_A5230

Alternate gene names: 78066699

Gene position: 2286561-2287607 (Clockwise)

Preceding gene: 78066696

Following gene: 78066700

Centisome position: 61.9

GC content: 67.43

Gene sequence:

>1047_bases
GTGACGAAACCCCGCTTCATCCGCACGGCCACGGCCGTCGCGACACTTGCCGCGTGCAGCGTTGCCGCGCACGCGCAGTC
GAGTCTCACGCTATACGGTGCGCTCGACGCCGGCGTGCAATACCTGACGCACGCCGACGGGCGCCACTCGGCCGTGCAGT
TGCAGAACTACGGCATCCTGCCTTCGCAGGTCGGGCTGAAAGGCCACGAGGATCTCGGCGGCGGCTGGCGCGCGCTGTTC
AAGCTCGAACAGGGCCTCAACCTCAACAACGGCACCGCGACCGTGCCCGGCTATGCATTCTTTCGCGGCGCCTACGTCGG
CATCGCCGGGCCCGTCGGCACCGTCACGCTCGGCCGGCAGTTCAGCGTGCTGTTCGACAAGACGCTGTTTTACGACCCGC
TCTGGTACGCGTCGTACAGCGGCCAGGGCGTCATCGTGCCGATGAACGCGAACTTCATCGACAACTCGGTCAAGTACCAG
TCGCCGACGTTCGCCGGCTTCGACGTGGAGGCGCTTGCCGCGACGTCCGGCGTCGCCGGCAATACGCGCGCCGGACGCGT
GCTCGAACTCGGCGGCCAATACACGAGCAACGGCCTGTCGGTCAGCGCGGTGCTGCATCAGTCACATGGCGATGTTTCGG
CGGCCGACAACACGTCGGCGCGCCGCCGCGAACTCGGCACGCTCGCCGCGCGCTATGCGTTCGCCACATTGCCGCTCACC
GTCTATGCGGGGGTCGAACGCCTGACCGGCGACCTCGACGCGGCACGCACGATCGTCTGGGGCGGTGCGCGCTACCAGAT
GTCGAGCGAGATCGGCCTGAACGCGGGCGTCTATCACACCGATTCGCGCACGCCGGCGATCGGCCACCCGACGCTGTTCA
TCGCGAGCACCACGTACGCGCTGTCGAAACGCACCGTCGCCTACGTGAACCTCGGCTACGCGCGCAACAGCGGCCAGAGT
TCCCAGACCGTCTACGAATACGACCCGACGCCGCTCGCCGGCGCATCGCAGTTCGGCGCGATGGTCGGCATGTACCACCT
GTTCTGA

Upstream 100 bases:

>100_bases
CCGTTCATCTGTACGACTGTTCGAAGGTTTTCCCGCTGCGGACACTGCGTCGCGACAACACCAACGACAAACCGATGCAG
GACGGTATGGAGAACCCCAC

Downstream 100 bases:

>100_bases
TTTCCCACACGAGATCCCGCCATGAAAACCCTTTCTACGGATGCCGCACTCCCGCCAGACGGCCGTGCATCGACCTTCGC
GCGCTCGACGCTCGTCGCGC

Product: outer membrane protein, (porin)

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTKPRFIRTATAVATLAACSVAAHAQSSLTLYGALDAGVQYLTHADGRHSAVQLQNYGILPSQVGLKGHEDLGGGWRALF
KLEQGLNLNNGTATVPGYAFFRGAYVGIAGPVGTVTLGRQFSVLFDKTLFYDPLWYASYSGQGVIVPMNANFIDNSVKYQ
SPTFAGFDVEALAATSGVAGNTRAGRVLELGGQYTSNGLSVSAVLHQSHGDVSAADNTSARRRELGTLAARYAFATLPLT
VYAGVERLTGDLDAARTIVWGGARYQMSSEIGLNAGVYHTDSRTPAIGHPTLFIASTTYALSKRTVAYVNLGYARNSGQS
SQTVYEYDPTPLAGASQFGAMVGMYHLF

Sequences:

>Translated_348_residues
MTKPRFIRTATAVATLAACSVAAHAQSSLTLYGALDAGVQYLTHADGRHSAVQLQNYGILPSQVGLKGHEDLGGGWRALF
KLEQGLNLNNGTATVPGYAFFRGAYVGIAGPVGTVTLGRQFSVLFDKTLFYDPLWYASYSGQGVIVPMNANFIDNSVKYQ
SPTFAGFDVEALAATSGVAGNTRAGRVLELGGQYTSNGLSVSAVLHQSHGDVSAADNTSARRRELGTLAARYAFATLPLT
VYAGVERLTGDLDAARTIVWGGARYQMSSEIGLNAGVYHTDSRTPAIGHPTLFIASTTYALSKRTVAYVNLGYARNSGQS
SQTVYEYDPTPLAGASQFGAMVGMYHLF
>Mature_347_residues
TKPRFIRTATAVATLAACSVAAHAQSSLTLYGALDAGVQYLTHADGRHSAVQLQNYGILPSQVGLKGHEDLGGGWRALFK
LEQGLNLNNGTATVPGYAFFRGAYVGIAGPVGTVTLGRQFSVLFDKTLFYDPLWYASYSGQGVIVPMNANFIDNSVKYQS
PTFAGFDVEALAATSGVAGNTRAGRVLELGGQYTSNGLSVSAVLHQSHGDVSAADNTSARRRELGTLAARYAFATLPLTV
YAGVERLTGDLDAARTIVWGGARYQMSSEIGLNAGVYHTDSRTPAIGHPTLFIASTTYALSKRTVAYVNLGYARNSGQSS
QTVYEYDPTPLAGASQFGAMVGMYHLF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 36865; Mature: 36734

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPRFIRTATAVATLAACSVAAHAQSSLTLYGALDAGVQYLTHADGRHSAVQLQNYGIL
CCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEECCCCC
PSQVGLKGHEDLGGGWRALFKLEQGLNLNNGTATVPGYAFFRGAYVGIAGPVGTVTLGRQ
HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCHHHHHCEEEEECCCCCEEEECCE
FSVLFDKTLFYDPLWYASYSGQGVIVPMNANFIDNSVKYQSPTFAGFDVEALAATSGVAG
EEEEEHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
NTRAGRVLELGGQYTSNGLSVSAVLHQSHGDVSAADNTSARRRELGTLAARYAFATLPLT
CCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
VYAGVERLTGDLDAARTIVWGGARYQMSSEIGLNAGVYHTDSRTPAIGHPTLFIASTTYA
EECCHHHHCCCHHHHEEEEECCCEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEH
LSKRTVAYVNLGYARNSGQSSQTVYEYDPTPLAGASQFGAMVGMYHLF
HCCCEEEEEEECEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKPRFIRTATAVATLAACSVAAHAQSSLTLYGALDAGVQYLTHADGRHSAVQLQNYGIL
CCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCEEEEECCCCC
PSQVGLKGHEDLGGGWRALFKLEQGLNLNNGTATVPGYAFFRGAYVGIAGPVGTVTLGRQ
HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCCHHHHHCEEEEECCCCCEEEECCE
FSVLFDKTLFYDPLWYASYSGQGVIVPMNANFIDNSVKYQSPTFAGFDVEALAATSGVAG
EEEEEHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
NTRAGRVLELGGQYTSNGLSVSAVLHQSHGDVSAADNTSARRRELGTLAARYAFATLPLT
CCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
VYAGVERLTGDLDAARTIVWGGARYQMSSEIGLNAGVYHTDSRTPAIGHPTLFIASTTYA
EECCHHHHCCCHHHHEEEEECCCEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEH
LSKRTVAYVNLGYARNSGQSSQTVYEYDPTPLAGASQFGAMVGMYHLF
HCCCEEEEEEECEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]