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The map label for this gene is arnC [H]

Identifier: 78066630

GI number: 78066630

Start: 2207893

End: 2208915

Strand: Direct

Name: arnC [H]

Synonym: Bcep18194_A5161

Alternate gene names: 78066630

Gene position: 2207893-2208915 (Clockwise)

Preceding gene: 78066629

Following gene: 78066631

Centisome position: 59.77

GC content: 65.79

Gene sequence:

>1023_bases
ATGAGTCACCTTGAAGCACGCGCCGGGCATCCGGTCGCCGGGCAGCCCGAAGTTTCGGTCATCATCCCCGTGTACAACGA
GGAAGACGGCCTCGCCGCGCTGTTCGCGCGGCTGTATCCGGCGCTCGACGCACTCGACACGTCGTACGAAGTGATCCTGA
TCAACGACGGCAGCCGCGACCGCTCGGCCGCGATGCTCGCCGATCAGTTCCACGTACGTCCCGACACGACGCGCATCGTG
CTGCTCAACGGCAACTACGGCCAGCACATGGCGATCCTCGCCGGCTTCGCGCAATCGCGCGGCGAGATCGTCATCACGCT
CGACGCCGACCTGCAGAACCCGCCCGAGGAAATCGGCAAGCTGATCGCGAAGATGCGCGAGGGCTACGACTATGTCGGCT
CGATCCGCAAGCAGCGCCAGGACAGCCTGTGGCGGCGCAAGGCGTCGCAGATGATGAACCGCCTGCGCGAGCGCATCACC
CGCATCAAGATGACCGACCAGGGCTGCATGCTGCGCGCGTACAGCCGCCGCATCATCGACACGATCAACGTGTGCGGCGA
AGTCAACACGTTCATCCCCGCACTCGCCTATACGTTCGCGCAGAAACCGACCGAAATCGAGGTCGCGCACGAGGAGCGCT
TCGCCGGCGAGTCGAAGTACTCGCTGTACAGCCTGATCCGGCTGAACTTCGACCTCGTGACGGGCTTCTCGGTCGTGCCG
CTGCAGTGGCTGTCGTTCATCGGCGTGATCCTGTCGCTCGGCTCCGCCGCCCTGTTCGTGCTGCTGCTCGTGCGACGCTT
CATCGTCGGCGCGGAAGTGCAAGGCGTGTTCACGCTGTTCGCGATCACGTTCTTCCTGCTCGGCGTGATCATCTTCGCGC
TCGGCCTGCTCGGCGAATACGTCGGCCGCATCTACCAGCAGGTGCGTGCACGGCCGCGCTACCTGATCCAGGCCGTGCTC
GAGCAGCACGACGGCGTGCCGGCGGTGCCGGCCGGCGCGAACCGCACGGGGGCCGCGCAATGA

Upstream 100 bases:

>100_bases
CGTCACGCTGCCGCTCTTCACGCAGATGACGGAAGGCGACGTGCGTCGCGTAGTCGACGCCATCAACCAGATTTGCGAAC
AATACGGAAAATAAGCGTAC

Downstream 100 bases:

>100_bases
AGCCGCGCGCAGTCGTCTTCGCGTATCACAACGTCGGCGTGCGGTGCCTGCAGGTGCTGCTCGCGCGCGGCGTCGACGTC
GCGCTCGTCGTCACGCACGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSHLEARAGHPVAGQPEVSVIIPVYNEEDGLAALFARLYPALDALDTSYEVILINDGSRDRSAAMLADQFHVRPDTTRIV
LLNGNYGQHMAILAGFAQSRGEIVITLDADLQNPPEEIGKLIAKMREGYDYVGSIRKQRQDSLWRRKASQMMNRLRERIT
RIKMTDQGCMLRAYSRRIIDTINVCGEVNTFIPALAYTFAQKPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTGFSVVP
LQWLSFIGVILSLGSAALFVLLLVRRFIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEYVGRIYQQVRARPRYLIQAVL
EQHDGVPAVPAGANRTGAAQ

Sequences:

>Translated_340_residues
MSHLEARAGHPVAGQPEVSVIIPVYNEEDGLAALFARLYPALDALDTSYEVILINDGSRDRSAAMLADQFHVRPDTTRIV
LLNGNYGQHMAILAGFAQSRGEIVITLDADLQNPPEEIGKLIAKMREGYDYVGSIRKQRQDSLWRRKASQMMNRLRERIT
RIKMTDQGCMLRAYSRRIIDTINVCGEVNTFIPALAYTFAQKPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTGFSVVP
LQWLSFIGVILSLGSAALFVLLLVRRFIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEYVGRIYQQVRARPRYLIQAVL
EQHDGVPAVPAGANRTGAAQ
>Mature_339_residues
SHLEARAGHPVAGQPEVSVIIPVYNEEDGLAALFARLYPALDALDTSYEVILINDGSRDRSAAMLADQFHVRPDTTRIVL
LNGNYGQHMAILAGFAQSRGEIVITLDADLQNPPEEIGKLIAKMREGYDYVGSIRKQRQDSLWRRKASQMMNRLRERITR
IKMTDQGCMLRAYSRRIIDTINVCGEVNTFIPALAYTFAQKPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTGFSVVPL
QWLSFIGVILSLGSAALFVLLLVRRFIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEYVGRIYQQVRARPRYLIQAVLE
QHDGVPAVPAGANRTGAAQ

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=242, Percent_Identity=26.0330578512397, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1788588, Length=313, Percent_Identity=51.1182108626198, Blast_Score=315, Evalue=2e-87,
Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=28.8025889967638, Blast_Score=155, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6325441, Length=147, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37876; Mature: 37745

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLEARAGHPVAGQPEVSVIIPVYNEEDGLAALFARLYPALDALDTSYEVILINDGSRD
CCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
RSAAMLADQFHVRPDTTRIVLLNGNYGQHMAILAGFAQSRGEIVITLDADLQNPPEEIGK
HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
LIAKMREGYDYVGSIRKQRQDSLWRRKASQMMNRLRERITRIKMTDQGCMLRAYSRRIID
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TINVCGEVNTFIPALAYTFAQKPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTGFSVVP
HHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH
LQWLSFIGVILSLGSAALFVLLLVRRFIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGRIYQQVRARPRYLIQAVLEQHDGVPAVPAGANRTGAAQ
HHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SHLEARAGHPVAGQPEVSVIIPVYNEEDGLAALFARLYPALDALDTSYEVILINDGSRD
CCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
RSAAMLADQFHVRPDTTRIVLLNGNYGQHMAILAGFAQSRGEIVITLDADLQNPPEEIGK
HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
LIAKMREGYDYVGSIRKQRQDSLWRRKASQMMNRLRERITRIKMTDQGCMLRAYSRRIID
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TINVCGEVNTFIPALAYTFAQKPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTGFSVVP
HHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH
LQWLSFIGVILSLGSAALFVLLLVRRFIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGRIYQQVRARPRYLIQAVLEQHDGVPAVPAGANRTGAAQ
HHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA