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The map label for this gene is comL [H]

Identifier: 78066564

GI number: 78066564

Start: 2134498

End: 2135322

Strand: Direct

Name: comL [H]

Synonym: Bcep18194_A5095

Alternate gene names: 78066564

Gene position: 2134498-2135322 (Clockwise)

Preceding gene: 78066554

Following gene: 78066568

Centisome position: 57.78

GC content: 64.36

Gene sequence:

>825_bases
ATGATGAATTCGACCAAACGCACGGCCAGAACCGCCGCCGCCCGGGCTGCGGCGGTAGCGGCCGCGGCCCTCATCGCCGG
CTGCCACGGCTTGCCGCAGAAGCAGGACGAGACGGCTACCTGGTCGAACAACAAATTATACTCAGAGGCCCAGGACGCAC
TGTCCGGAGGCGACTGGGGCAAGTGCGCGAAATATTTCGAATCGCTGCAAGGTCGCGATCCGTTCGGCCATTTCGCGCAA
CAGGCGCAGATCAACGTTGCATACTGCAACTGGAAGGATAACGAAGCGGCCGCCGCCGACCAGGCCGTCGATCGCTTCAT
CCAGCTCCACCCCGATCATCCGGATATCCCGTACGCGTACTACCTGAAGGGGATGATCCACTTCAACGACGATCTGGGCC
TGTTCGGCCGCTTCTCCGGCCAGGACATGAGCGAGCGCGATCCGCAGGCACTGCGCGAATCGTACGATGCGTTCAAGGTC
GTCGTCGACCGCTTCCCGAAAAGCAAGTACGCGCCCGACGCCGCCGCGCGGATGCGCTACATCGTCAACGCGCTCGCGTC
GCACGAAGTGCACGCGGCCGACTACTACTACCGGCGCGGCGCCTACGTCGCGGCCATCAACCGTGCGCAGCTCGCGATCA
AGGACTACAAGGGCGCCCCGGCGATCGAGGACGCGCTGCACATCATGATCCTGTCGTACGGCAAGCTGAACCAGCCGCAA
CTCGCCGAGGACACGAAGCGCGTGCTCGCCGGCACGTTCCCCGACAGCCCGTATGTCACGGGCCACTCGCGCCCGGGCGC
GAAGAAGTCGTGGTGGCAGTTCTGA

Upstream 100 bases:

>100_bases
CTATAATCTTCGCGATTTGGTGTGCCCGGCTGGGCATTCTGCGAACTTGAACGGGTCATTTAGACTGGGTCACCGAGACT
TGAAGCTAGGACATGCGAGC

Downstream 100 bases:

>100_bases
CGAAAGCACCGTGCAGCCCTCGCTGCACGAACAAAAAACCCGGCCATCGAGCCGGGTTTTTTATTGGCGCCGCACTCAGG
CGGCGCCGGTGCGATCGCGC

Product: DNA uptake lipoprotein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MMNSTKRTARTAAARAAAVAAAALIAGCHGLPQKQDETATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQ
QAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALRESYDAFKV
VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQ
LAEDTKRVLAGTFPDSPYVTGHSRPGAKKSWWQF

Sequences:

>Translated_274_residues
MMNSTKRTARTAAARAAAVAAAALIAGCHGLPQKQDETATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQ
QAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALRESYDAFKV
VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQ
LAEDTKRVLAGTFPDSPYVTGHSRPGAKKSWWQF
>Mature_274_residues
MMNSTKRTARTAAARAAAVAAAALIAGCHGLPQKQDETATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQ
QAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALRESYDAFKV
VVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQ
LAEDTKRVLAGTFPDSPYVTGHSRPGAKKSWWQF

Specific function: Required for efficient transformation of Neisseria gonorrhoeae by species-related DNA [H]

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=236, Percent_Identity=35.5932203389831, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30490; Mature: 30490

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNSTKRTARTAAARAAAVAAAALIAGCHGLPQKQDETATWSNNKLYSEAQDALSGGDWG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH
KCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAY
HHHHHHHHHCCCCCHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCHHH
YLKGMIHFNDDLGLFGRFSGQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRY
HHEEHEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
IVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQ
HHHHHHHCCCHHHHHHHHCCCEEEEECHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCH
LAEDTKRVLAGTFPDSPYVTGHSRPGAKKSWWQF
HHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MMNSTKRTARTAAARAAAVAAAALIAGCHGLPQKQDETATWSNNKLYSEAQDALSGGDWG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH
KCAKYFESLQGRDPFGHFAQQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAY
HHHHHHHHHCCCCCHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCHHH
YLKGMIHFNDDLGLFGRFSGQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRY
HHEEHEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
IVNALASHEVHAADYYYRRGAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQ
HHHHHHHCCCHHHHHHHHCCCEEEEECHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCH
LAEDTKRVLAGTFPDSPYVTGHSRPGAKKSWWQF
HHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8830266 [H]