| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066524
Identifier: 78066524
GI number: 78066524
Start: 2092930
End: 2093691
Strand: Direct
Name: 78066524
Synonym: Bcep18194_A5055
Alternate gene names: NA
Gene position: 2092930-2093691 (Clockwise)
Preceding gene: 78066520
Following gene: 78066525
Centisome position: 56.66
GC content: 66.27
Gene sequence:
>762_bases TTGAGCATCCTGACCAAAATCGAGGGCGGCTATCTTCAGGTATTGCGCGTGATCGTGCTGTTGTTCGCGACCGCAGTCCT GATCGGCGGAGTCATATTCGGCGCGGTCGCACTCGATGCGCGCCTGTCGAAACCGCCGAAAGTCGATTCGGCCATCCAGG TCGATCCGGCATCGTTCGCGTGGGAAAACGATGCGCCCGCCAAGGCCACGCCGGCCGCCGACGGCGCGGCAGCCAAGGAC GACAACGCGTCGCCCGCGCTGAGCCTGTCGACGCGACTGTCGGGCATCGTGCAGAAGCACGGCCGGGCGGCCCTGTCGCC GGACTACGCGGTCGATCGCGACGCGTACGAGCCGTCGTTCCAGCGCGTGCTCAGTGACGACGGCCATCCGGAAGTCGCGT ACTACGAGCAGCAGATCGCCTATCTCGACAAGGTGCTGTCGCGTGCGGACGTCGCGGCCAGCGTCAAGAAGAAGGTCACC GGTCACGGCGACGAATATGCGCGCGAGCAGGCATACACCGACATCGTGTCGGCCGTCATGCGCGACTTCTCCGAGCGCTA CGACGCACGCCGGACCGCGATCGACGACGAGAAGAAGGCCGCGGAAGAAACGGCTGCCGAGAATGGCCAGACCGCGCGCT ACGCGGGCGTCGCCGCGCTCGTCGCGCTGTATTCGTTCGTGTCGCTCGCGGTGCTGATCATCCTGATCCGCGTCGAGCGC AGCATCCGCTCGATCGCGCGCGCCACGCACACGACGACCTGA
Upstream 100 bases:
>100_bases ACATTCTAGCGAGCGTTTCGGTCGGCGGGTGTGACGATTGACAGCCATTAGAAAGGTCTTTAGCCTCGGCGCCTCATTCA TCATAAGAAAGGAGAATGCC
Downstream 100 bases:
>100_bases TCCCGCGCATCGGCAGCCCGGCCCGTACGCCGGGCTGCGGCGGGCACTGCAACGGGCCCGCTTGGCGGCGCAAGCGGCCG GTTCCCGGCTGCATCTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSILTKIEGGYLQVLRVIVLLFATAVLIGGVIFGAVALDARLSKPPKVDSAIQVDPASFAWENDAPAKATPAADGAAAKD DNASPALSLSTRLSGIVQKHGRAALSPDYAVDRDAYEPSFQRVLSDDGHPEVAYYEQQIAYLDKVLSRADVAASVKKKVT GHGDEYAREQAYTDIVSAVMRDFSERYDARRTAIDDEKKAAEETAAENGQTARYAGVAALVALYSFVSLAVLIILIRVER SIRSIARATHTTT
Sequences:
>Translated_253_residues MSILTKIEGGYLQVLRVIVLLFATAVLIGGVIFGAVALDARLSKPPKVDSAIQVDPASFAWENDAPAKATPAADGAAAKD DNASPALSLSTRLSGIVQKHGRAALSPDYAVDRDAYEPSFQRVLSDDGHPEVAYYEQQIAYLDKVLSRADVAASVKKKVT GHGDEYAREQAYTDIVSAVMRDFSERYDARRTAIDDEKKAAEETAAENGQTARYAGVAALVALYSFVSLAVLIILIRVER SIRSIARATHTTT >Mature_252_residues SILTKIEGGYLQVLRVIVLLFATAVLIGGVIFGAVALDARLSKPPKVDSAIQVDPASFAWENDAPAKATPAADGAAAKDD NASPALSLSTRLSGIVQKHGRAALSPDYAVDRDAYEPSFQRVLSDDGHPEVAYYEQQIAYLDKVLSRADVAASVKKKVTG HGDEYAREQAYTDIVSAVMRDFSERYDARRTAIDDEKKAAEETAAENGQTARYAGVAALVALYSFVSLAVLIILIRVERS IRSIARATHTTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27187; Mature: 27056
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILTKIEGGYLQVLRVIVLLFATAVLIGGVIFGAVALDARLSKPPKVDSAIQVDPASFA CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC WENDAPAKATPAADGAAAKDDNASPALSLSTRLSGIVQKHGRAALSPDYAVDRDAYEPSF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH QRVLSDDGHPEVAYYEQQIAYLDKVLSRADVAASVKKKVTGHGDEYAREQAYTDIVSAVM HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RDFSERYDARRTAIDDEKKAAEETAAENGQTARYAGVAALVALYSFVSLAVLIILIRVER HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIRSIARATHTTT HHHHHHHHHCCCC >Mature Secondary Structure SILTKIEGGYLQVLRVIVLLFATAVLIGGVIFGAVALDARLSKPPKVDSAIQVDPASFA CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC WENDAPAKATPAADGAAAKDDNASPALSLSTRLSGIVQKHGRAALSPDYAVDRDAYEPSF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH QRVLSDDGHPEVAYYEQQIAYLDKVLSRADVAASVKKKVTGHGDEYAREQAYTDIVSAVM HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RDFSERYDARRTAIDDEKKAAEETAAENGQTARYAGVAALVALYSFVSLAVLIILIRVER HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIRSIARATHTTT HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA