| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066514
Identifier: 78066514
GI number: 78066514
Start: 2082988
End: 2083794
Strand: Direct
Name: 78066514
Synonym: Bcep18194_A5045
Alternate gene names: NA
Gene position: 2082988-2083794 (Clockwise)
Preceding gene: 78066513
Following gene: 78066515
Centisome position: 56.39
GC content: 72.49
Gene sequence:
>807_bases ATGCTGATTTCCCTCGTCCTAGGCGGTTTCGTCGGTGCCGTGCTCGGCCTGACCGGCGCCGGCGGCGGCATCCTCGCGGT GCCCGCACTCGTCGTCGGCATGAGCTGGCCGATGCAGCAGGCCACGCCCGTCGCGCTTGTCGCCGTGGCCGGCAGCGCCG CGCTCGGCGCGCTCGAAGGCTTCCGCCGCGGGCTCGTGCGCTATCGCGCGGCGCTGCTGATGGCCGTGGCCGGCGTGCCG CTGACCACGCTCGGCGTGCGGCTCGCGCACGTGCTGCCGCAACGGCTGCTGCTCGCGCTGTTCGCGCTGACGATGCTGGT CGTCGCCGGCCGCCTGTTGCTGCAGGCGCTGCGGCACGCGCCGGTCGACGCGGAAGCGTCGCCGCTGTGCGTCGGCCGCG TGAATCCCGATACGGGCCGGCTCGTGTGGTCCTGGCCGGTCGGCGTGGCACTCGCGTCGACTGGTGCAATGACGGGCCTG ATGACCGGGCTGCTCGGCGTCGGCGGCGGTTTCGTGATCGTGCCGATGCTGCGCAAGTTCACGAACGTGTCGATGCATGG CGTCGTCGCGACGTCGTTGATGGTGATCGCGCTCGTCGGCACCGGCGGCGTGTTCGCGACGCTCGTGTCCGGTACACGCG CACCGCTCGACGTGACGCTGTGGTTCACCGTCGCGACCGCACTCGGCATGGCCGCCGGTCGCGGTGCGTCGCACCACCTC GCTGCACGGCACGTGCAGGCCGGGTTCGCGGCCGTGCTCGTGTGCGTCGCACTCGGGCTGCTGGCGAAGGCGGCGTTCGG CGCGTAA
Upstream 100 bases:
>100_bases GGAACGCGTGCTGCCGCCGCTCTACTGGAAGGCGATGCTCAAGGGCCGCGAATGGCTCGCGAAGCCCGCGATCGCACGTT GACCGGAGCCCGCTGACGTC
Downstream 100 bases:
>100_bases GCCGACGCACGACCGGGCGCGGGAATCGAATCGGCGCCCGGTCCGCGACGCACTTTATCCGTCGCAATCGCGTACTGACC GGCACCGACTCACGCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLISLVLGGFVGAVLGLTGAGGGILAVPALVVGMSWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAALLMAVAGVP LTTLGVRLAHVLPQRLLLALFALTMLVVAGRLLLQALRHAPVDAEASPLCVGRVNPDTGRLVWSWPVGVALASTGAMTGL MTGLLGVGGGFVIVPMLRKFTNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAPLDVTLWFTVATALGMAAGRGASHHL AARHVQAGFAAVLVCVALGLLAKAAFGA
Sequences:
>Translated_268_residues MLISLVLGGFVGAVLGLTGAGGGILAVPALVVGMSWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAALLMAVAGVP LTTLGVRLAHVLPQRLLLALFALTMLVVAGRLLLQALRHAPVDAEASPLCVGRVNPDTGRLVWSWPVGVALASTGAMTGL MTGLLGVGGGFVIVPMLRKFTNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAPLDVTLWFTVATALGMAAGRGASHHL AARHVQAGFAAVLVCVALGLLAKAAFGA >Mature_268_residues MLISLVLGGFVGAVLGLTGAGGGILAVPALVVGMSWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAALLMAVAGVP LTTLGVRLAHVLPQRLLLALFALTMLVVAGRLLLQALRHAPVDAEASPLCVGRVNPDTGRLVWSWPVGVALASTGAMTGL MTGLLGVGGGFVIVPMLRKFTNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAPLDVTLWFTVATALGMAAGRGASHHL AARHVQAGFAAVLVCVALGLLAKAAFGA
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26918; Mature: 26918
Theoretical pI: Translated: 12.25; Mature: 12.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISLVLGGFVGAVLGLTGAGGGILAVPALVVGMSWPMQQATPVALVAVAGSAALGALEG CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH FRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLALFALTMLVVAGRLLLQALRHA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVDAEASPLCVGRVNPDTGRLVWSWPVGVALASTGAMTGLMTGLLGVGGGFVIVPMLRKF CCCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAPLDVTLWFTVATALGMAAGRGASHHL HCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH AARHVQAGFAAVLVCVALGLLAKAAFGA HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLISLVLGGFVGAVLGLTGAGGGILAVPALVVGMSWPMQQATPVALVAVAGSAALGALEG CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH FRRGLVRYRAALLMAVAGVPLTTLGVRLAHVLPQRLLLALFALTMLVVAGRLLLQALRHA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVDAEASPLCVGRVNPDTGRLVWSWPVGVALASTGAMTGLMTGLLGVGGGFVIVPMLRKF CCCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TNVSMHGVVATSLMVIALVGTGGVFATLVSGTRAPLDVTLWFTVATALGMAAGRGASHHL HCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH AARHVQAGFAAVLVCVALGLLAKAAFGA HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA