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The map label for this gene is qseB [H]

Identifier: 78066488

GI number: 78066488

Start: 2054117

End: 2054782

Strand: Direct

Name: qseB [H]

Synonym: Bcep18194_A5019

Alternate gene names: 78066488

Gene position: 2054117-2054782 (Clockwise)

Preceding gene: 78066487

Following gene: 78066489

Centisome position: 55.6

GC content: 69.22

Gene sequence:

>666_bases
ATGCGAATACTGCTCGTCGAAGACGACCCGATGATCGGCGAGGCCGTCCATGCCGCGTTGAAGGACGCGTCGTACGCCAC
CGACTGGGTCACCGACGGCGTGCGCGCGTTGACCGCGTTCGCCGCGCAGCCTTACGACCTGGTCCTGCTCGACCTCGGCC
TGCCCGGCCGCGACGGGCTCGACGTGCTGGCTGCCATCCGCGCGAAGGACGCCAGCGCGCCGCTGCTGATCGTCACCGCA
CGCGACGGGCTCGACGATCGCCTGGCCGGCCTCGACGGCGGCGCCGACGACTACATCGTGAAGCCGTTCGAGATGGCCGA
GCTGCTCGCGCGGATTCGCGTCGCGATCCGGCGCCGGGCCGGTTCGGCTGCGCCGCTGCTGAGCAATGGCATCGTGTCGC
TCGATCCGGCCACGCGCGAGGCCTCGGTCGACGGGCACGCACCGGTGCCGCTGTCGAATCGCGAATTCGCGCTGCTGCGC
GCGCTGCTGGTGCGCCCGGGCGCAATCCTGTCGCGGCGCGAGCTCGAGGATCGCCTGTACGGCTGGGGCGAGGAAGTCGA
AAGCAATGCGGTCGAATTCCTGATCCATTCGCTGCGCCGCAAGCTCGGCAGCACCGTGATCAAGAACGTCAGGGGTGCGG
GATGGATGGTTTCAAGAAGCGGCTGA

Upstream 100 bases:

>100_bases
CCGGTTCAGCGGCAAATAACGATCGCAGCGCACCGCGGCACGTGACGCACGTGCGGGAATCGCATACGCTGGCGGCGTTT
GCGCGGCACGGAGAACACGC

Downstream 100 bases:

>100_bases
ACGAATCGATCGGCTTCCGCCTGTCGGTCGCGCTGTCGGCCGCGATCCTGGTCGTCGCGACGGCCGCGGCCGCGTTCGCG
TTTTCATCGGCATTCGACGA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRILLVEDDPMIGEAVHAALKDASYATDWVTDGVRALTAFAAQPYDLVLLDLGLPGRDGLDVLAAIRAKDASAPLLIVTA
RDGLDDRLAGLDGGADDYIVKPFEMAELLARIRVAIRRRAGSAAPLLSNGIVSLDPATREASVDGHAPVPLSNREFALLR
ALLVRPGAILSRRELEDRLYGWGEEVESNAVEFLIHSLRRKLGSTVIKNVRGAGWMVSRSG

Sequences:

>Translated_221_residues
MRILLVEDDPMIGEAVHAALKDASYATDWVTDGVRALTAFAAQPYDLVLLDLGLPGRDGLDVLAAIRAKDASAPLLIVTA
RDGLDDRLAGLDGGADDYIVKPFEMAELLARIRVAIRRRAGSAAPLLSNGIVSLDPATREASVDGHAPVPLSNREFALLR
ALLVRPGAILSRRELEDRLYGWGEEVESNAVEFLIHSLRRKLGSTVIKNVRGAGWMVSRSG
>Mature_221_residues
MRILLVEDDPMIGEAVHAALKDASYATDWVTDGVRALTAFAAQPYDLVLLDLGLPGRDGLDVLAAIRAKDASAPLLIVTA
RDGLDDRLAGLDGGADDYIVKPFEMAELLARIRVAIRRRAGSAAPLLSNGIVSLDPATREASVDGHAPVPLSNREFALLR
ALLVRPGAILSRRELEDRLYGWGEEVESNAVEFLIHSLRRKLGSTVIKNVRGAGWMVSRSG

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. Currently it is not known whether this effect is direct or not [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=217, Percent_Identity=47.4654377880184, Blast_Score=197, Evalue=6e-52,
Organism=Escherichia coli, GI1790552, Length=217, Percent_Identity=42.8571428571429, Blast_Score=167, Evalue=5e-43,
Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=36.0730593607306, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=32.2727272727273, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=32.4444444444444, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=36.5638766519824, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1786599, Length=224, Percent_Identity=32.5892857142857, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=32.7586206896552, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=32.579185520362, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1786911, Length=202, Percent_Identity=35.6435643564356, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=29.9107142857143, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI2367329, Length=233, Percent_Identity=34.3347639484979, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=28.5087719298246, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=27.8969957081545, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=31.7757009345794, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1790299, Length=123, Percent_Identity=31.7073170731707, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=32.4561403508772, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 23800; Mature: 23800

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLVEDDPMIGEAVHAALKDASYATDWVTDGVRALTAFAAQPYDLVLLDLGLPGRDGL
CEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCH
DVLAAIRAKDASAPLLIVTARDGLDDRLAGLDGGADDYIVKPFEMAELLARIRVAIRRRA
HHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHC
GSAAPLLSNGIVSLDPATREASVDGHAPVPLSNREFALLRALLVRPGAILSRRELEDRLY
CCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHC
GWGEEVESNAVEFLIHSLRRKLGSTVIKNVRGAGWMVSRSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
>Mature Secondary Structure
MRILLVEDDPMIGEAVHAALKDASYATDWVTDGVRALTAFAAQPYDLVLLDLGLPGRDGL
CEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCH
DVLAAIRAKDASAPLLIVTARDGLDDRLAGLDGGADDYIVKPFEMAELLARIRVAIRRRA
HHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHC
GSAAPLLSNGIVSLDPATREASVDGHAPVPLSNREFALLRALLVRPGAILSRRELEDRLY
CCCCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHC
GWGEEVESNAVEFLIHSLRRKLGSTVIKNVRGAGWMVSRSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]