| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78066451
Identifier: 78066451
GI number: 78066451
Start: 2008843
End: 2009361
Strand: Direct
Name: 78066451
Synonym: Bcep18194_A4982
Alternate gene names: NA
Gene position: 2008843-2009361 (Clockwise)
Preceding gene: 78066450
Following gene: 78066480
Centisome position: 54.38
GC content: 58.77
Gene sequence:
>519_bases ATGACGGATACACGCTTCCAAAACGGACCGACCTGGTCGGTACCTTCCAGCGGCCGTAGCAGTTGGAAAAATCGTTTCTT CGTCGACACCGAGTTCACGGACTTCGAGGCGCCTCAACTCATTAGTTTGGCCATCGTTGGGGAAAACGGGGCTGAATTCT ACGGCGAATGCACGGACTACGATGCAACGCGCTGCAGTGACTTCGTTCGGGCCGTGGTGCTGCCGCAACTGGGGCGACTC AAGGGCCGTGCGATGCCATTTGATCAACTGAGTCAAGCGCTACAGGCTTGGGGCGAGAGCATCCCGACGACCTCGAAGCC GGTGCTTTGCTACGACCTTCAAACAGACTTAGATCTGCTGCGATCCCTGCTTGGTGGCTCGTTCCCCGAGGGATGGGCGC GTGAGGATGTCCGTGGCCAAATCGATCTTCGGCGGCTCGCCGAATACTTCGCGCGACACGGCGGCGAGCACCACGCGTTG CACGATGCTCGCGCAAACGCATACGCCTATATTGGTTGA
Upstream 100 bases:
>100_bases GGCTTTCCGATGGACAGGCCATGTGTGCGGCTTTGGCTCTCGTAATGAGACGGGAGGAAGTCCAAGTGTTCTGTGCTGAA TATGCCCAGGGTGAGCGACT
Downstream 100 bases:
>100_bases ACGACCCGATCGAAGCCGTTGCATGTTGGCCTGTATTTCATCCAATCGTGCCGTCTCTTTTGTCTCAGACGTTTTGCCCA GTTATCGGGTTCCACGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTDTRFQNGPTWSVPSSGRSSWKNRFFVDTEFTDFEAPQLISLAIVGENGAEFYGECTDYDATRCSDFVRAVVLPQLGRL KGRAMPFDQLSQALQAWGESIPTTSKPVLCYDLQTDLDLLRSLLGGSFPEGWAREDVRGQIDLRRLAEYFARHGGEHHAL HDARANAYAYIG
Sequences:
>Translated_172_residues MTDTRFQNGPTWSVPSSGRSSWKNRFFVDTEFTDFEAPQLISLAIVGENGAEFYGECTDYDATRCSDFVRAVVLPQLGRL KGRAMPFDQLSQALQAWGESIPTTSKPVLCYDLQTDLDLLRSLLGGSFPEGWAREDVRGQIDLRRLAEYFARHGGEHHAL HDARANAYAYIG >Mature_171_residues TDTRFQNGPTWSVPSSGRSSWKNRFFVDTEFTDFEAPQLISLAIVGENGAEFYGECTDYDATRCSDFVRAVVLPQLGRLK GRAMPFDQLSQALQAWGESIPTTSKPVLCYDLQTDLDLLRSLLGGSFPEGWAREDVRGQIDLRRLAEYFARHGGEHHALH DARANAYAYIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19283; Mature: 19151
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTRFQNGPTWSVPSSGRSSWKNRFFVDTEFTDFEAPQLISLAIVGENGAEFYGECTDY CCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCEEEEEEECCCCHHHCCCCCCC DATRCSDFVRAVVLPQLGRLKGRAMPFDQLSQALQAWGESIPTTSKPVLCYDLQTDLDLL CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHH RSLLGGSFPEGWAREDVRGQIDLRRLAEYFARHGGEHHALHDARANAYAYIG HHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECC >Mature Secondary Structure TDTRFQNGPTWSVPSSGRSSWKNRFFVDTEFTDFEAPQLISLAIVGENGAEFYGECTDY CCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCEEEEEEECCCCHHHCCCCCCC DATRCSDFVRAVVLPQLGRLKGRAMPFDQLSQALQAWGESIPTTSKPVLCYDLQTDLDLL CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHH RSLLGGSFPEGWAREDVRGQIDLRRLAEYFARHGGEHHALHDARANAYAYIG HHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA