| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066446
Identifier: 78066446
GI number: 78066446
Start: 2006123
End: 2006644
Strand: Reverse
Name: 78066446
Synonym: Bcep18194_A4977
Alternate gene names: NA
Gene position: 2006644-2006123 (Counterclockwise)
Preceding gene: 78066447
Following gene: 78066442
Centisome position: 54.32
GC content: 60.34
Gene sequence:
>522_bases ATGACTGACAAACTTTCCGCGCCTTTCGTCATCGAGCGCCGCTTCGCTGCGCCGCGTGAACTCGTATACGCCGCGTTGAC CGAAGCTGAGCACTTGAGTACGTGGATGAGTCCACCCGGGATGGAAATGTCTCACTGCACAGTGGATGCGCGTGTCGGTG GCGTCTTTCACTACGCGATGAAACCGCGCGGCGTGCCCGACGCTCCCGCTATGTGGGGCAAGTGGACGTTCCGCGAATTG ACGCCCCCTACGCGTATTGTTGTCGTCGTGCAGTTTAGTGATGCCGAAGGCGGAGTGACGCGACATCCGATGTCCGCGCA ATGGCCGCTTTATACGCTTTCGACGACGACGCTCAGCGAAGTCGAGGGTGGCACATTAATGCACCTTGAGTGGCGCGCGC TCGACGCCGGTGAAGCAGAGGAAGCCACCTTCGACGCGTCGCACGCCAGCATGTCTCAAGGTTGGGGCGGGACAATGGAC GCGCTCGACAAGTACCTCATACAGCTGCAAGCCGATCGCTGA
Upstream 100 bases:
>100_bases CAGCAACTGCAGCGGCATCCTGTCAAGGACTCCAACGTAAACGCTGCGCCGAGAGCCACACCTAAAGTTTCCTCAACCAG AACCAGGAAGACTCGCCCCC
Downstream 100 bases:
>100_bases GTCGGGGGACAAAAGAGAAGCGCACTTTAGGTGCGCCTCTTCACTTCGTGTAACCACACGCCGGAGCCGGACAGATGAAT ACTCCGTCGCCCCTGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTDKLSAPFVIERRFAAPRELVYAALTEAEHLSTWMSPPGMEMSHCTVDARVGGVFHYAMKPRGVPDAPAMWGKWTFREL TPPTRIVVVVQFSDAEGGVTRHPMSAQWPLYTLSTTTLSEVEGGTLMHLEWRALDAGEAEEATFDASHASMSQGWGGTMD ALDKYLIQLQADR
Sequences:
>Translated_173_residues MTDKLSAPFVIERRFAAPRELVYAALTEAEHLSTWMSPPGMEMSHCTVDARVGGVFHYAMKPRGVPDAPAMWGKWTFREL TPPTRIVVVVQFSDAEGGVTRHPMSAQWPLYTLSTTTLSEVEGGTLMHLEWRALDAGEAEEATFDASHASMSQGWGGTMD ALDKYLIQLQADR >Mature_172_residues TDKLSAPFVIERRFAAPRELVYAALTEAEHLSTWMSPPGMEMSHCTVDARVGGVFHYAMKPRGVPDAPAMWGKWTFRELT PPTRIVVVVQFSDAEGGVTRHPMSAQWPLYTLSTTTLSEVEGGTLMHLEWRALDAGEAEEATFDASHASMSQGWGGTMDA LDKYLIQLQADR
Specific function: Unknown
COG id: COG3832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19158; Mature: 19027
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKLSAPFVIERRFAAPRELVYAALTEAEHLSTWMSPPGMEMSHCTVDARVGGVFHYAM CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEE KPRGVPDAPAMWGKWTFRELTPPTRIVVVVQFSDAEGGVTRHPMSAQWPLYTLSTTTLSE CCCCCCCCCCCCCCEEHHCCCCCEEEEEEEEECCCCCCEEECCCCCCCCEEEEECCCHHH VEGGTLMHLEWRALDAGEAEEATFDASHASMSQGWGGTMDALDKYLIQLQADR CCCCEEEEEEEEECCCCCCCCCEECCCHHHHHCCCCCCHHHHHHHHEEEECCC >Mature Secondary Structure TDKLSAPFVIERRFAAPRELVYAALTEAEHLSTWMSPPGMEMSHCTVDARVGGVFHYAM CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEE KPRGVPDAPAMWGKWTFRELTPPTRIVVVVQFSDAEGGVTRHPMSAQWPLYTLSTTTLSE CCCCCCCCCCCCCCEEHHCCCCCEEEEEEEEECCCCCCEEECCCCCCCCEEEEECCCHHH VEGGTLMHLEWRALDAGEAEEATFDASHASMSQGWGGTMDALDKYLIQLQADR CCCCEEEEEEEEECCCCCCCCCEECCCHHHHHCCCCCCHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA