| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066404
Identifier: 78066404
GI number: 78066404
Start: 1951603
End: 1952361
Strand: Direct
Name: 78066404
Synonym: Bcep18194_A4934
Alternate gene names: NA
Gene position: 1951603-1952361 (Clockwise)
Preceding gene: 78066403
Following gene: 78066405
Centisome position: 52.83
GC content: 58.5
Gene sequence:
>759_bases ATGAGCTTGTTTGATTCAGTTTCCATCAGCACCGACATCGCATCGTCGCGCGACTCTCTGGAGGCTCGCATTGCGGCAGT GGATTGGGGCGCCTTGGAGACGACCTTGGGCCAGGACGGGTACGCCGTGATCCCCTCGTTGCTGGTGCCGAACCAATGTG ATCAGGTATCTGGCTTTTTCTTCGAGGACGAACGCTTTCGAAGCCGTATCGTGATGGAGCGCTATGCCTTCGGGCGAGGT GAGTACAAGTACTTCAGCTACCCGTTGCCTGACGTGGTCGGCCGGCTCCGGCATTCCCTCTATCCTCATCTCGCGCCGAT CGCCAATCGTTGGCATGGTGCGATGCGAATCGATCAGCGGTTTCCGGCGACTCATGCTGAATTTCGGGAGGTTTGCAAAC GTGCAGGTCAACAACGGCCGACGCCGCTGTTGCTGCGCTACCAAGCCAATGATTATTGCTGCCTCCATCAAGACCTCTAC GGCGAACATGTCTTCCCGTTCCAGGCAATCGTTCTGCTCAACGAGCCAGGGCGCGATTTCGAAGGTGGCGAGCTACTGCT GACAGAGAGCAATCCGAAGCGGCCTGGTCGGGCAGATGTGGTGCCGCTCCGACAGGGTGACGCAGTCATTCTTGCTGTCA ATCATCGCCCCATTCGCTCCGCTCGCGGCTTCTACCGGGCGAATCTGCGTCATGGGGTTAGTCGGCTGCATTGGGGGCAG CGACACACACTGGGCATCATTTTCCACGACGCCAAGTAG
Upstream 100 bases:
>100_bases GCTATAGGCCTTGCGCCGTCTGCTTACCTAAGGAGTACGCAGCATGGAAGCAAGCAAGGTCTGTCCAGGCTCCGACCTCC GCTTACAAGGAACCTCGCTC
Downstream 100 bases:
>100_bases CGTCCGAGGAGCTGCATCCGAAGATAACAGGGTATGACATCATGAAACGAATCGGATACGCTCCCGGCGCATATGACCTC TTTCATATCGGCCATCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSLFDSVSISTDIASSRDSLEARIAAVDWGALETTLGQDGYAVIPSLLVPNQCDQVSGFFFEDERFRSRIVMERYAFGRG EYKYFSYPLPDVVGRLRHSLYPHLAPIANRWHGAMRIDQRFPATHAEFREVCKRAGQQRPTPLLLRYQANDYCCLHQDLY GEHVFPFQAIVLLNEPGRDFEGGELLLTESNPKRPGRADVVPLRQGDAVILAVNHRPIRSARGFYRANLRHGVSRLHWGQ RHTLGIIFHDAK
Sequences:
>Translated_252_residues MSLFDSVSISTDIASSRDSLEARIAAVDWGALETTLGQDGYAVIPSLLVPNQCDQVSGFFFEDERFRSRIVMERYAFGRG EYKYFSYPLPDVVGRLRHSLYPHLAPIANRWHGAMRIDQRFPATHAEFREVCKRAGQQRPTPLLLRYQANDYCCLHQDLY GEHVFPFQAIVLLNEPGRDFEGGELLLTESNPKRPGRADVVPLRQGDAVILAVNHRPIRSARGFYRANLRHGVSRLHWGQ RHTLGIIFHDAK >Mature_251_residues SLFDSVSISTDIASSRDSLEARIAAVDWGALETTLGQDGYAVIPSLLVPNQCDQVSGFFFEDERFRSRIVMERYAFGRGE YKYFSYPLPDVVGRLRHSLYPHLAPIANRWHGAMRIDQRFPATHAEFREVCKRAGQQRPTPLLLRYQANDYCCLHQDLYG EHVFPFQAIVLLNEPGRDFEGGELLLTESNPKRPGRADVVPLRQGDAVILAVNHRPIRSARGFYRANLRHGVSRLHWGQR HTLGIIFHDAK
Specific function: Unknown
COG id: COG3826
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018655 [H]
Pfam domain/function: PF09859 DUF2086 [H]
EC number: NA
Molecular weight: Translated: 28747; Mature: 28616
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFDSVSISTDIASSRDSLEARIAAVDWGALETTLGQDGYAVIPSLLVPNQCDQVSGFF CCCCCCCCCCHHHHCCCCCHHEEEEEEECCHHHHHCCCCCCEEHHHHHCCCCCCCCCCCE FEDERFRSRIVMERYAFGRGEYKYFSYPLPDVVGRLRHSLYPHLAPIANRWHGAMRIDQR ECCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCC FPATHAEFREVCKRAGQQRPTPLLLRYQANDYCCLHQDLYGEHVFPFQAIVLLNEPGRDF CCCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECHHHCCCCCCCEEEEEEECCCCCCC EGGELLLTESNPKRPGRADVVPLRQGDAVILAVNHRPIRSARGFYRANLRHGVSRLHWGQ CCCEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHCCCC RHTLGIIFHDAK CCEEEEEEECCC >Mature Secondary Structure SLFDSVSISTDIASSRDSLEARIAAVDWGALETTLGQDGYAVIPSLLVPNQCDQVSGFF CCCCCCCCCHHHHCCCCCHHEEEEEEECCHHHHHCCCCCCEEHHHHHCCCCCCCCCCCE FEDERFRSRIVMERYAFGRGEYKYFSYPLPDVVGRLRHSLYPHLAPIANRWHGAMRIDQR ECCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCC FPATHAEFREVCKRAGQQRPTPLLLRYQANDYCCLHQDLYGEHVFPFQAIVLLNEPGRDF CCCCHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECHHHCCCCCCCEEEEEEECCCCCCC EGGELLLTESNPKRPGRADVVPLRQGDAVILAVNHRPIRSARGFYRANLRHGVSRLHWGQ CCCEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHCCHHHHHHHHHHHHHCCCC RHTLGIIFHDAK CCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]