| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066396
Identifier: 78066396
GI number: 78066396
Start: 1946513
End: 1947235
Strand: Direct
Name: 78066396
Synonym: Bcep18194_A4926
Alternate gene names: NA
Gene position: 1946513-1947235 (Clockwise)
Preceding gene: 78066395
Following gene: 78066397
Centisome position: 52.69
GC content: 58.09
Gene sequence:
>723_bases ATGAAGCTCAAGACTCGGCGTGAGCAGGATATGACGCCCTTGACTTACGATTGGCCGGGTGTCGAACGATCGCTCGATAC TTACGGCAACGCTGTTCTTCCGAATTTGCTGACCGCAGAGCAATGCAACGCCCTTGCCGAGCGCTATGCAAAGGAGGATG GCTTTCGCACGCGAATCGTGATGGCGCGACACGGGTTCGGGCGCGGCGAATACAAGTACTTCGCGTATCCGTTGCCACCG CTGCTCGACGGGTTGCGACATGCGTTGTATCCCCGGCTTGTCCCGATTGCCAATCGCTGGAACAGGCAATTGGGTAGCGA CACGCAGTTTCCGGTCGACCTGGATGTGTTTCTCGATCGATGTCACCTTGCCGGGCAGAGCCGGCCGACGCCGCTGATCC TTGAATATGGTGAGGGTGATTACAACTGCCTGCACCAGGACCTCTACGGCGACCACGTGTTCCCTTTGCAGGTAGCCATT CTGTTGTCAGCTCCCGGCTCGGATTTCACGGGTGGCGAGTTTGTCATGACGGAGTATTCAACCCAAGGCCAACGAGCAGA CGTTGTCTCGCTGCGTCAGGGCGATGCAGTGGTATTCACCGTCAATCAGAGGCCTGCAATGGGGCAGCGCGGACTTCGAA GCGTGGCAATGCGACATGGCGTCAGTCGTATTCGTAGCGGCAGCCGTCACACCGTCGGCCTGATCTTTCACGATTCGAGG TGA
Upstream 100 bases:
>100_bases CCATTCCTTGTCATCGCGTCGTACGCAGCGACGGCTCCGTGTCCGGCTATCGCTGGGGTGTCGAGCGCAAGCTCGCGCTG TTGGCCGAGGAGTGTGCGCA
Downstream 100 bases:
>100_bases GCATGGATTCGCTGCATCTTTTCGAGACGGAAGGTGAACACCTCCGCATTGGCGCCGACGCCGTCGTGCTTCGTGGGTTC GCCCTGCCGTATCTGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKLKTRREQDMTPLTYDWPGVERSLDTYGNAVLPNLLTAEQCNALAERYAKEDGFRTRIVMARHGFGRGEYKYFAYPLPP LLDGLRHALYPRLVPIANRWNRQLGSDTQFPVDLDVFLDRCHLAGQSRPTPLILEYGEGDYNCLHQDLYGDHVFPLQVAI LLSAPGSDFTGGEFVMTEYSTQGQRADVVSLRQGDAVVFTVNQRPAMGQRGLRSVAMRHGVSRIRSGSRHTVGLIFHDSR
Sequences:
>Translated_240_residues MKLKTRREQDMTPLTYDWPGVERSLDTYGNAVLPNLLTAEQCNALAERYAKEDGFRTRIVMARHGFGRGEYKYFAYPLPP LLDGLRHALYPRLVPIANRWNRQLGSDTQFPVDLDVFLDRCHLAGQSRPTPLILEYGEGDYNCLHQDLYGDHVFPLQVAI LLSAPGSDFTGGEFVMTEYSTQGQRADVVSLRQGDAVVFTVNQRPAMGQRGLRSVAMRHGVSRIRSGSRHTVGLIFHDSR >Mature_240_residues MKLKTRREQDMTPLTYDWPGVERSLDTYGNAVLPNLLTAEQCNALAERYAKEDGFRTRIVMARHGFGRGEYKYFAYPLPP LLDGLRHALYPRLVPIANRWNRQLGSDTQFPVDLDVFLDRCHLAGQSRPTPLILEYGEGDYNCLHQDLYGDHVFPLQVAI LLSAPGSDFTGGEFVMTEYSTQGQRADVVSLRQGDAVVFTVNQRPAMGQRGLRSVAMRHGVSRIRSGSRHTVGLIFHDSR
Specific function: Unknown
COG id: COG3826
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018655 [H]
Pfam domain/function: PF09859 DUF2086 [H]
EC number: NA
Molecular weight: Translated: 27112; Mature: 27112
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKTRREQDMTPLTYDWPGVERSLDTYGNAVLPNLLTAEQCNALAERYAKEDGFRTRIV CCCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE MARHGFGRGEYKYFAYPLPPLLDGLRHALYPRLVPIANRWNRQLGSDTQFPVDLDVFLDR EEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH CHLAGQSRPTPLILEYGEGDYNCLHQDLYGDHVFPLQVAILLSAPGSDFTGGEFVMTEYS HHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCCEEEEEECC TQGQRADVVSLRQGDAVVFTVNQRPAMGQRGLRSVAMRHGVSRIRSGSRHTVGLIFHDSR CCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC >Mature Secondary Structure MKLKTRREQDMTPLTYDWPGVERSLDTYGNAVLPNLLTAEQCNALAERYAKEDGFRTRIV CCCCCCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE MARHGFGRGEYKYFAYPLPPLLDGLRHALYPRLVPIANRWNRQLGSDTQFPVDLDVFLDR EEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH CHLAGQSRPTPLILEYGEGDYNCLHQDLYGDHVFPLQVAILLSAPGSDFTGGEFVMTEYS HHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCCEEEEEECC TQGQRADVVSLRQGDAVVFTVNQRPAMGQRGLRSVAMRHGVSRIRSGSRHTVGLIFHDSR CCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]