| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066388
Identifier: 78066388
GI number: 78066388
Start: 1940594
End: 1941127
Strand: Direct
Name: 78066388
Synonym: Bcep18194_A4918
Alternate gene names: NA
Gene position: 1940594-1941127 (Clockwise)
Preceding gene: 78066379
Following gene: 78066389
Centisome position: 52.53
GC content: 55.99
Gene sequence:
>534_bases ATGAGTTCGAGCGACCACGTGATTCTCTACTCAACGAAAGCGGGAGTCTCCATGAAGCGCATCGGGTATCTTTCTAATGC CTTCGATCTCTTTCACGTCGGACATCTGAACGTATTGCAATACGCAAAGGCGCGATGTGACTACCTCGTCATCGGCGTGA CAACCGACGAGGTGTTCACCAGGGTGTCCGGTTACAAGCCCGTGATCCCATTCGAAGTACGGATAGAGATCGTGCGCAGT GTGCGTTTCGTCGACTCGGCAGTTGCAGACGACACGGGGAACTACGTTGATGCGTGGAACACGCTGCGGTTCGATCGCTT GTTCGATCATTCCGAAGATGTGGGCACACAGGCAGAGGCAGGTGAAATTGCCGACGTGATCGTCCCTGGCATCGAGGTGA TTCGACTCCCGGATCTACCTACGACCACGAGCGCCTCTCTTCGCGGCTCAATCGAGAATCTGAACCGACTTGCCGTTGGG CAACGGTTGCGCGCGGATCGAGTCTCTCCGAGCTTGCAGCTGGCAGTCCACTGA
Upstream 100 bases:
>100_bases TTCAAAGCAAGAAACGGATCGAACGGTCGTGGTTCGGCGCCTATCGTTGAGGTCATCTTCACAACCTCACGCGGTGTAGC TGCCCGACCAAACGAGCGTC
Downstream 100 bases:
>100_bases ATCGAATTCGGCCCTTATTGGGCACATATTCCTCGTCGCCGAAATGGCATCGCCAACGGGCCGACTGTAGGGAACACCTG ATCACCACGTTTATATGTAC
Product: cytidyltransferase-related
Products: diphosphate; CDPglycerol
Alternate protein names: Glycerol-3-Phosphate Cytidyltransferase; Cytidyltransferase-Related Domain-Containing Protein; Cytidyltransferase-Related; Cytidyltransferase-Related Domain; Cytidyltransferase-Related Domain Protein; Cytidyltransferase-Related Protein; Cytidyltransferase-Related Protein Domain Protein; Cytidylyltransferase; Cytidyltransferase-Like Domain-Containing Protein; Cytidyltransferase
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSSSDHVILYSTKAGVSMKRIGYLSNAFDLFHVGHLNVLQYAKARCDYLVIGVTTDEVFTRVSGYKPVIPFEVRIEIVRS VRFVDSAVADDTGNYVDAWNTLRFDRLFDHSEDVGTQAEAGEIADVIVPGIEVIRLPDLPTTTSASLRGSIENLNRLAVG QRLRADRVSPSLQLAVH
Sequences:
>Translated_177_residues MSSSDHVILYSTKAGVSMKRIGYLSNAFDLFHVGHLNVLQYAKARCDYLVIGVTTDEVFTRVSGYKPVIPFEVRIEIVRS VRFVDSAVADDTGNYVDAWNTLRFDRLFDHSEDVGTQAEAGEIADVIVPGIEVIRLPDLPTTTSASLRGSIENLNRLAVG QRLRADRVSPSLQLAVH >Mature_176_residues SSSDHVILYSTKAGVSMKRIGYLSNAFDLFHVGHLNVLQYAKARCDYLVIGVTTDEVFTRVSGYKPVIPFEVRIEIVRSV RFVDSAVADDTGNYVDAWNTLRFDRLFDHSEDVGTQAEAGEIADVIVPGIEVIRLPDLPTTTSASLRGSIENLNRLAVGQ RLRADRVSPSLQLAVH
Specific function: Unknown
COG id: COG0615
COG function: function code MI; Cytidylyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.39
Molecular weight: Translated: 19564; Mature: 19433
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSDHVILYSTKAGVSMKRIGYLSNAFDLFHVGHLNVLQYAKARCDYLVIGVTTDEVFT CCCCCCEEEEECCCCCCHHHHHHHHCHHHHEECCCHHHHHHHHHCCCEEEEEECHHHHHH RVSGYKPVIPFEVRIEIVRSVRFVDSAVADDTGNYVDAWNTLRFDRLFDHSEDVGTQAEA HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCC GEIADVIVPGIEVIRLPDLPTTTSASLRGSIENLNRLAVGQRLRADRVSPSLQLAVH CCHHHHHHCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure SSSDHVILYSTKAGVSMKRIGYLSNAFDLFHVGHLNVLQYAKARCDYLVIGVTTDEVFT CCCCCEEEEECCCCCCHHHHHHHHCHHHHEECCCHHHHHHHHHCCCEEEEEECHHHHHH RVSGYKPVIPFEVRIEIVRSVRFVDSAVADDTGNYVDAWNTLRFDRLFDHSEDVGTQAEA HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCC GEIADVIVPGIEVIRLPDLPTTTSASLRGSIENLNRLAVGQRLRADRVSPSLQLAVH CCHHHHHHCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; sn-glycerol 3-phosphate
Specific reaction: CTP + sn-glycerol 3-phosphate = diphosphate + CDP-glycerol
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA