| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066371
Identifier: 78066371
GI number: 78066371
Start: 1919970
End: 1920752
Strand: Direct
Name: 78066371
Synonym: Bcep18194_A4901
Alternate gene names: NA
Gene position: 1919970-1920752 (Clockwise)
Preceding gene: 78066370
Following gene: 78066372
Centisome position: 51.97
GC content: 65.64
Gene sequence:
>783_bases ATGAGCCAGGTCAGCTATCGAATCGGCCAGATCGTGCCCAGTTCGAACACGACGATGGAAACGGAAGTGCCGGCGCTGCT GCGCCGCCGCGAACTCGTCGCGCCGGAGCGCTTCACGTTTCATTCGAGCCGCATGCGTATGCACAAGGTGACGAAGGAAG AGCTCGTCGCGATGAACAAGGAAGGGCTGCGCTGCGCGGCAGAGCTTGCGGATGCGCGCATGGACGTGATGAGCACGGCA TGCCTCGTTGCCATCATGGCGATGGGGCCGGGATACCACCGGACCGTCGAGCGCGAGCTGGAAGAGGTGGCGCGGGCCAA CAGCTGCGAGGCAGCCGTGATGACGTCGGCCGGTGCGCTGATCGACGGGCTGCGCATCATGGGCGCGCGTCGGATCTCGC TGATGGCGCCGTACATGAAGCCGTTGACGAAGCTGGTGGTCGAATACATCGAGAGCGAAGGCATCGAGGTGATCGACGCG CTGTCGTTCGAGATTCCCGACAATCTCGACGTCGGCCGCCGCGATCCGCTGCAACTCGTGAACGATGTCGCGCGGCTGAA CACGGCGAACGCCGACGTCGTGGTCGCGTCCGCCTGCGTGCAGATGCAGTCGCTGCCGGCGATCGACACGATCCAGGCAT CGCTCGGCATTCCGGTGACGTCGACCGCCGTGTGCACCACACGCCGGATGCTCGACAAGCTCGGTCTCGATGCGGTGATT CCCGGCGGCGGCGCGCTTCTGACGGACGCGTACGCCGGTCGCGTTGCCGTGGCGGAGGCCTGA
Upstream 100 bases:
>100_bases ACCCGGGTCGGCAAGGTCGACAAGCCGGCCATGCGACGCGCGATTGCCGCCATTCTTGAAACAGAACAGTTGTCCCATAC CCCCAGGCAGGAGCAATGAC
Downstream 100 bases:
>100_bases CATGAACGTGACGTCAGGGTTCGACGCGGGCCCGTCGGAGTGGCTCGTCAGCGAGCATCCGTTCGTGGTGCGGCGCTGCG TGAAATGGGGCGAGTGCGAT
Product: Asp/Glu racemase
Products: fumarate
Alternate protein names: Maleate Cis-Trans Isomerase; Asp/Glu/Hydantoin Racemase; Arylmalonate Decarboxylase; Asp/Glu/Hydantoin Racemase Family Protein; Maleate Cis-Trans Isomerase Protein; Maleate Isomerase; Asp/Glu/Hydantoin Racemase Family; Ectoine Utilization Protein EutA; Cis-Trans Isomerase; Decarboxylase
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSQVSYRIGQIVPSSNTTMETEVPALLRRRELVAPERFTFHSSRMRMHKVTKEELVAMNKEGLRCAAELADARMDVMSTA CLVAIMAMGPGYHRTVERELEEVARANSCEAAVMTSAGALIDGLRIMGARRISLMAPYMKPLTKLVVEYIESEGIEVIDA LSFEIPDNLDVGRRDPLQLVNDVARLNTANADVVVASACVQMQSLPAIDTIQASLGIPVTSTAVCTTRRMLDKLGLDAVI PGGGALLTDAYAGRVAVAEA
Sequences:
>Translated_260_residues MSQVSYRIGQIVPSSNTTMETEVPALLRRRELVAPERFTFHSSRMRMHKVTKEELVAMNKEGLRCAAELADARMDVMSTA CLVAIMAMGPGYHRTVERELEEVARANSCEAAVMTSAGALIDGLRIMGARRISLMAPYMKPLTKLVVEYIESEGIEVIDA LSFEIPDNLDVGRRDPLQLVNDVARLNTANADVVVASACVQMQSLPAIDTIQASLGIPVTSTAVCTTRRMLDKLGLDAVI PGGGALLTDAYAGRVAVAEA >Mature_259_residues SQVSYRIGQIVPSSNTTMETEVPALLRRRELVAPERFTFHSSRMRMHKVTKEELVAMNKEGLRCAAELADARMDVMSTAC LVAIMAMGPGYHRTVERELEEVARANSCEAAVMTSAGALIDGLRIMGARRISLMAPYMKPLTKLVVEYIESEGIEVIDAL SFEIPDNLDVGRRDPLQLVNDVARLNTANADVVVASACVQMQSLPAIDTIQASLGIPVTSTAVCTTRRMLDKLGLDAVIP GGGALLTDAYAGRVAVAEA
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.2.1.1
Molecular weight: Translated: 28079; Mature: 27948
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVSYRIGQIVPSSNTTMETEVPALLRRRELVAPERFTFHSSRMRMHKVTKEELVAMNK CCCHHHHHHHEECCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC EGLRCAAELADARMDVMSTACLVAIMAMGPGYHRTVERELEEVARANSCEAAVMTSAGAL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH IDGLRIMGARRISLMAPYMKPLTKLVVEYIESEGIEVIDALSFEIPDNLDVGRRDPLQLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCCCCHHHHH NDVARLNTANADVVVASACVQMQSLPAIDTIQASLGIPVTSTAVCTTRRMLDKLGLDAVI HHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEC PGGGALLTDAYAGRVAVAEA CCCCCEEHHHCCCCEEEECC >Mature Secondary Structure SQVSYRIGQIVPSSNTTMETEVPALLRRRELVAPERFTFHSSRMRMHKVTKEELVAMNK CCHHHHHHHEECCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC EGLRCAAELADARMDVMSTACLVAIMAMGPGYHRTVERELEEVARANSCEAAVMTSAGAL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH IDGLRIMGARRISLMAPYMKPLTKLVVEYIESEGIEVIDALSFEIPDNLDVGRRDPLQLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCCCCHHHHH NDVARLNTANADVVVASACVQMQSLPAIDTIQASLGIPVTSTAVCTTRRMLDKLGLDAVI HHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEC PGGGALLTDAYAGRVAVAEA CCCCCEEHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: maleate
Specific reaction: maleate = fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA