| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066365
Identifier: 78066365
GI number: 78066365
Start: 1912593
End: 1914083
Strand: Reverse
Name: 78066365
Synonym: Bcep18194_A4895
Alternate gene names: NA
Gene position: 1914083-1912593 (Counterclockwise)
Preceding gene: 78066375
Following gene: 78066364
Centisome position: 51.81
GC content: 57.14
Gene sequence:
>1491_bases ATGACAGCAAGCCAGTGGCATCGACGTGCTTTTCGTCCACGTCAGGCCAGAAAGTGTGCCCGGCGTGCAACCGCAGTTGC GCTCGCGCAGCCTCATGGTCTGGTCGGCCCAACCCAATTTGCCACGACTCAGACTCGGACTATGTGGTTCGAATTCATGC AGGATCTCCCAGCGGCTGCTAATCTGCGTTGGGTGCCTCGCGACTATCTTGGAAACGATCAGTGGTTTGCAGCGCCCCTC TGGGCGTGCCCGCTCGATCCCAATCGCTGCGCTACTGCCGCTCAGAATGTGCCCCAGATCGATCTGAGCTATCTCGGCCC TACCACACGTGGTAGGCCTGATGCGGAGATGACATTGAAACCCACATACTTCGGTGCATCCGGCAATGTGCCCGTAGATG ACGATGTGCGGCCGTTTAGCACACTCAATCCCACACGCAGCGACATTAATCGCAACAACCGTCGACATCACTTCATCTCG GTCGTCTATATGAACGGCTTCGCGGATGATCGAGGCCGAGTCCAGGTCTACCGCTGCGAGGCACCGGAAGACCCGCATCC GATGAACCCGCGGGCGATCGGGTTCGAGAGAGACTATTATTCGCAGCCGCTGCCGGATGGCGGCCGGGAGAACCACCGCT TCGAGGATTTGTGGAACACGATCGAGACCGTTTGGCCTGAAACGGTCCAAGCCCTTGCAGCCCGCCGGCTGTCACCCGCC ATTTCCTTCAACGTCCTAGGTATGGCAGCGATCATGCGCGCCCGCGTTCCGGCGACCCGCGATCGTCACGCTTTGAGGCT TGAAACCAAGTTGCGCACCGAGCACAAGGTGGCTGAAGAGATCGGCGTTCTTCCCCCTGAGCTAAAGTGCTACGCTGGAC AGTTCGATACTGTACCGATCGGCATCAATCCACACGAGACGCTGCTGGCGATGGAAGCTGAGTTCAAGGACTTTGGCGAT CTTTGCTTTCAGCTCGGTTTCGAGGTGCTGCACAACAAGACCAGCGTGCCATTCCTCACCTCAGACAATCCGGTCTGTAG TTATGATCCTCGCCAAGCGTTCCTTGCAAGAAGCCCTTATGACCATGCGGGTGAGGTCGAGCTGATCTTTCCAGTTTCCG CACGCATGCTTATTCGCGGCTCCAGCAAGCTTGCGCCAGCGAACATGATCTCACGTCACCGTACCATCGCTGACACTCAG AAAGTCCGGCAACTCAATCGGACCGTCGCGCAGTTTTCCTATCGCATGACAATCGGCAAGGATCGGTCAAGCGACGACAT GATACGACTCCATGCAACGCTCGTACCCACTATCACCGCGGAAGTACGTAGACATGAGAAGAAGATTTTGATTATCTGTC GGAATGTTTTCGGCCCTATGCCAATGCTGTCGCAATATATCGATACACCTGAGAAAGCCGCACGCCTCGAGGCCAGTATG GCAGCCGCTTCACAGACCGGGCTCTGGACTGTAGGCGCGGCGCCTGATTAG
Upstream 100 bases:
>100_bases CATTCAGAACGGCGTCGACAGCCAAGCGCCGATCGAAGGTCGCCTGCTTGCCCTTGTGTGCGCGAGCTAGCGCCAGCAGA TCCGTATCGATCAGCTGCGA
Downstream 100 bases:
>100_bases GCCGAGGGGGATAGCGGCTCATGGCTACTTCTTCTATGATCGAGCGGCAAATAAATACAATTACGTTGACGAGAATAAAC CAGCCACTGCGTTTCTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MTASQWHRRAFRPRQARKCARRATAVALAQPHGLVGPTQFATTQTRTMWFEFMQDLPAAANLRWVPRDYLGNDQWFAAPL WACPLDPNRCATAAQNVPQIDLSYLGPTTRGRPDAEMTLKPTYFGASGNVPVDDDVRPFSTLNPTRSDINRNNRRHHFIS VVYMNGFADDRGRVQVYRCEAPEDPHPMNPRAIGFERDYYSQPLPDGGRENHRFEDLWNTIETVWPETVQALAARRLSPA ISFNVLGMAAIMRARVPATRDRHALRLETKLRTEHKVAEEIGVLPPELKCYAGQFDTVPIGINPHETLLAMEAEFKDFGD LCFQLGFEVLHNKTSVPFLTSDNPVCSYDPRQAFLARSPYDHAGEVELIFPVSARMLIRGSSKLAPANMISRHRTIADTQ KVRQLNRTVAQFSYRMTIGKDRSSDDMIRLHATLVPTITAEVRRHEKKILIICRNVFGPMPMLSQYIDTPEKAARLEASM AAASQTGLWTVGAAPD
Sequences:
>Translated_496_residues MTASQWHRRAFRPRQARKCARRATAVALAQPHGLVGPTQFATTQTRTMWFEFMQDLPAAANLRWVPRDYLGNDQWFAAPL WACPLDPNRCATAAQNVPQIDLSYLGPTTRGRPDAEMTLKPTYFGASGNVPVDDDVRPFSTLNPTRSDINRNNRRHHFIS VVYMNGFADDRGRVQVYRCEAPEDPHPMNPRAIGFERDYYSQPLPDGGRENHRFEDLWNTIETVWPETVQALAARRLSPA ISFNVLGMAAIMRARVPATRDRHALRLETKLRTEHKVAEEIGVLPPELKCYAGQFDTVPIGINPHETLLAMEAEFKDFGD LCFQLGFEVLHNKTSVPFLTSDNPVCSYDPRQAFLARSPYDHAGEVELIFPVSARMLIRGSSKLAPANMISRHRTIADTQ KVRQLNRTVAQFSYRMTIGKDRSSDDMIRLHATLVPTITAEVRRHEKKILIICRNVFGPMPMLSQYIDTPEKAARLEASM AAASQTGLWTVGAAPD >Mature_495_residues TASQWHRRAFRPRQARKCARRATAVALAQPHGLVGPTQFATTQTRTMWFEFMQDLPAAANLRWVPRDYLGNDQWFAAPLW ACPLDPNRCATAAQNVPQIDLSYLGPTTRGRPDAEMTLKPTYFGASGNVPVDDDVRPFSTLNPTRSDINRNNRRHHFISV VYMNGFADDRGRVQVYRCEAPEDPHPMNPRAIGFERDYYSQPLPDGGRENHRFEDLWNTIETVWPETVQALAARRLSPAI SFNVLGMAAIMRARVPATRDRHALRLETKLRTEHKVAEEIGVLPPELKCYAGQFDTVPIGINPHETLLAMEAEFKDFGDL CFQLGFEVLHNKTSVPFLTSDNPVCSYDPRQAFLARSPYDHAGEVELIFPVSARMLIRGSSKLAPANMISRHRTIADTQK VRQLNRTVAQFSYRMTIGKDRSSDDMIRLHATLVPTITAEVRRHEKKILIICRNVFGPMPMLSQYIDTPEKAARLEASMA AASQTGLWTVGAAPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55979; Mature: 55848
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASQWHRRAFRPRQARKCARRATAVALAQPHGLVGPTQFATTQTRTMWFEFMQDLPAAA CCCHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCCCHHCCHHHHHHHHHHHHHCCCCC NLRWVPRDYLGNDQWFAAPLWACPLDPNRCATAAQNVPQIDLSYLGPTTRGRPDAEMTLK CCEECCHHHCCCCCEEECCEEECCCCCHHHHHHHCCCCCEEHHHCCCCCCCCCCCCEEEE PTYFGASGNVPVDDDVRPFSTLNPTRSDINRNNRRHHFISVVYMNGFADDRGRVQVYRCE EEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEECC APEDPHPMNPRAIGFERDYYSQPLPDGGRENHRFEDLWNTIETVWPETVQALAARRLSPA CCCCCCCCCCCEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCC ISFNVLGMAAIMRARVPATRDRHALRLETKLRTEHKVAEEIGVLPPELKCYAGQFDTVPI HHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHEECCCCCEEEE GINPHETLLAMEAEFKDFGDLCFQLGFEVLHNKTSVPFLTSDNPVCSYDPRQAFLARSPY CCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHCCCC DHAGEVELIFPVSARMLIRGSSKLAPANMISRHRTIADTQKVRQLNRTVAQFSYRMTIGK CCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC DRSSDDMIRLHATLVPTITAEVRRHEKKILIICRNVFGPMPMLSQYIDTPEKAARLEASM CCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHHCCHHHHHHHHHHH AAASQTGLWTVGAAPD HHHCCCCEEEECCCCC >Mature Secondary Structure TASQWHRRAFRPRQARKCARRATAVALAQPHGLVGPTQFATTQTRTMWFEFMQDLPAAA CCHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCCCCCHHCCHHHHHHHHHHHHHCCCCC NLRWVPRDYLGNDQWFAAPLWACPLDPNRCATAAQNVPQIDLSYLGPTTRGRPDAEMTLK CCEECCHHHCCCCCEEECCEEECCCCCHHHHHHHCCCCCEEHHHCCCCCCCCCCCCEEEE PTYFGASGNVPVDDDVRPFSTLNPTRSDINRNNRRHHFISVVYMNGFADDRGRVQVYRCE EEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEECC APEDPHPMNPRAIGFERDYYSQPLPDGGRENHRFEDLWNTIETVWPETVQALAARRLSPA CCCCCCCCCCCEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCC ISFNVLGMAAIMRARVPATRDRHALRLETKLRTEHKVAEEIGVLPPELKCYAGQFDTVPI HHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHEECCCCCEEEE GINPHETLLAMEAEFKDFGDLCFQLGFEVLHNKTSVPFLTSDNPVCSYDPRQAFLARSPY CCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHCCCC DHAGEVELIFPVSARMLIRGSSKLAPANMISRHRTIADTQKVRQLNRTVAQFSYRMTIGK CCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC DRSSDDMIRLHATLVPTITAEVRRHEKKILIICRNVFGPMPMLSQYIDTPEKAARLEASM CCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHHCCHHHHHHHHHHH AAASQTGLWTVGAAPD HHHCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA