| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78066305
Identifier: 78066305
GI number: 78066305
Start: 1850953
End: 1851540
Strand: Direct
Name: 78066305
Synonym: Bcep18194_A4835
Alternate gene names: NA
Gene position: 1850953-1851540 (Clockwise)
Preceding gene: 78066304
Following gene: 78066310
Centisome position: 50.11
GC content: 53.74
Gene sequence:
>588_bases ATGAGATTGCTGACAACTGCCGAGGCTGATGAATACCTGCAGACTATAGGCATGCAGATAGGAAGTTGGAATCAAATCGC CGACATACCGCGTGAAAGAACTGTACGCACCTACCTGCCGTACAGTGCGCCCACTAATTCGCGGGAACTGTACGTGTTTG CGCATCACGCGGCCGGCTGGTTGCCCGCAGGCAAGTGGAAAATATTCCAGATCGACAATTCGAGCGCGTTCCGCGGGGAC GAGCTTCAGTTCATCGATACCGTGCTCGGACCCAACACCGGCCTGGGCCGTGATATCGATGTTTGGTCCCGATCTCTTTT GTTCGAAGGGGCCGCAAACGCGAACCTCGACGTTTCTGATGAGCTAACCATCGCAAGGCTCATTTATCTGTTCTTGCTTT TCGAACAGCATGCCTATGTGGTCTCTTCGGAGAGTTTGAACGGTCAACGGCTAGGCATACAAGATGGCGTCATCGATTTC GAGTCCGATGTCTTCTACCGCCCTGCGGCTGATCAACTGATGCGTGTGTTCGAGTCTGAGCCATTGCGGCTTCCGTCATG GATGGACCGCTTTTTAGACGTCGCCTGA
Upstream 100 bases:
>100_bases GACGCGGGCGGTCGCCTTGTCAGTAAGCGGCCGGTCGAACTATATATACTTCCCTATCAACATGTTGCCTCCCTGAGCCT GAACGCAAAAGGACGCTCCC
Downstream 100 bases:
>100_bases TTGGCTGCTTCTGTCCGAACACCGACAATCTTCCCGGCGTTCCCCGGAAATTCGCCATGCACAAAAAAAACCCGCCGCGC AATGCGGCGGGCTTTTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MRLLTTAEADEYLQTIGMQIGSWNQIADIPRERTVRTYLPYSAPTNSRELYVFAHHAAGWLPAGKWKIFQIDNSSAFRGD ELQFIDTVLGPNTGLGRDIDVWSRSLLFEGAANANLDVSDELTIARLIYLFLLFEQHAYVVSSESLNGQRLGIQDGVIDF ESDVFYRPAADQLMRVFESEPLRLPSWMDRFLDVA
Sequences:
>Translated_195_residues MRLLTTAEADEYLQTIGMQIGSWNQIADIPRERTVRTYLPYSAPTNSRELYVFAHHAAGWLPAGKWKIFQIDNSSAFRGD ELQFIDTVLGPNTGLGRDIDVWSRSLLFEGAANANLDVSDELTIARLIYLFLLFEQHAYVVSSESLNGQRLGIQDGVIDF ESDVFYRPAADQLMRVFESEPLRLPSWMDRFLDVA >Mature_195_residues MRLLTTAEADEYLQTIGMQIGSWNQIADIPRERTVRTYLPYSAPTNSRELYVFAHHAAGWLPAGKWKIFQIDNSSAFRGD ELQFIDTVLGPNTGLGRDIDVWSRSLLFEGAANANLDVSDELTIARLIYLFLLFEQHAYVVSSESLNGQRLGIQDGVIDF ESDVFYRPAADQLMRVFESEPLRLPSWMDRFLDVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22167; Mature: 22167
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLTTAEADEYLQTIGMQIGSWNQIADIPRERTVRTYLPYSAPTNSRELYVFAHHAAGW CCEECCCCHHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCEEEEEEECCCCC LPAGKWKIFQIDNSSAFRGDELQFIDTVLGPNTGLGRDIDVWSRSLLFEGAANANLDVSD CCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC ELTIARLIYLFLLFEQHAYVVSSESLNGQRLGIQDGVIDFESDVFYRPAADQLMRVFESE CHHHHHHHHHHHHHHHCEEEEECCCCCCCEECCCCCCEECCCCEEECCHHHHHHHHHCCC PLRLPSWMDRFLDVA CCCCHHHHHHHHCCC >Mature Secondary Structure MRLLTTAEADEYLQTIGMQIGSWNQIADIPRERTVRTYLPYSAPTNSRELYVFAHHAAGW CCEECCCCHHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCEEEEEEECCCCC LPAGKWKIFQIDNSSAFRGDELQFIDTVLGPNTGLGRDIDVWSRSLLFEGAANANLDVSD CCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC ELTIARLIYLFLLFEQHAYVVSSESLNGQRLGIQDGVIDFESDVFYRPAADQLMRVFESE CHHHHHHHHHHHHHHHCEEEEECCCCCCCEECCCCCCEECCCCEEECCHHHHHHHHHCCC PLRLPSWMDRFLDVA CCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA