| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066281
Identifier: 78066281
GI number: 78066281
Start: 1827214
End: 1827537
Strand: Direct
Name: 78066281
Synonym: Bcep18194_A4811
Alternate gene names: NA
Gene position: 1827214-1827537 (Clockwise)
Preceding gene: 78066280
Following gene: 78066284
Centisome position: 49.46
GC content: 68.52
Gene sequence:
>324_bases ATGCGGGCACTCTTCATCTGCAGCCGCAACCGGCTGCGCAGCCCGACGGCCGAAGCGGTATTCGCCGCGTGGCCGGACGT CGAAACCGACTCGGCGGGCCTCGCGCCCGATGCGGATACGCGCCTGTCCGCCGAGCAGCTCGACTGGGCCGAAGTCGTGT TCGTGATGGAGCGGGCGCACAAGGCGCGGCTGGCGGCGCAATTCGGTGCGCATCTGCGGCACAAGAAAATCGTGTGCCTC GACATTCCCGACCGTTACGTGGACATGCAGCCCGAGCTCGTCACGCTGCTCGAGCGCAAGGCCGGCCCGTTCCTGCGCGG GTGA
Upstream 100 bases:
>100_bases GGCAAGGCCGACTACGTGCCGCACATGCTCGCGTACGTCCGGCCGGGCACGATTCCGCAAGGGTGAGCCGGCAGGCGCCG AGCGACCTCGAAGCGACTTG
Downstream 100 bases:
>100_bases TCGGCACGGCCGAAGTGGACGTCAGCGCAGCCGGCCGTTCGCAATCACCGAAAAGCAGTCGAGACGCAGCAGCTCGATGA TCTTGCGCGTCGGCACGCTT
Product: low molecular weight phosphotyrosine protein phosphatase
Products: NA
Alternate protein names: Protein-Tyrosine Phosphatase Low Molecular Weight; Protein-Tyrosine-Phosphatase; Phosphatase; Phosphotyrosine Protein Phosphatase; Protein Tyrosine Phosphatase; Protein Tyrosine Phosphatase-Like Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MRALFICSRNRLRSPTAEAVFAAWPDVETDSAGLAPDADTRLSAEQLDWAEVVFVMERAHKARLAAQFGAHLRHKKIVCL DIPDRYVDMQPELVTLLERKAGPFLRG
Sequences:
>Translated_107_residues MRALFICSRNRLRSPTAEAVFAAWPDVETDSAGLAPDADTRLSAEQLDWAEVVFVMERAHKARLAAQFGAHLRHKKIVCL DIPDRYVDMQPELVTLLERKAGPFLRG >Mature_107_residues MRALFICSRNRLRSPTAEAVFAAWPDVETDSAGLAPDADTRLSAEQLDWAEVVFVMERAHKARLAAQFGAHLRHKKIVCL DIPDRYVDMQPELVTLLERKAGPFLRG
Specific function: Unknown
COG id: COG4551
COG function: function code R; Predicted protein tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12046; Mature: 12046
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALFICSRNRLRSPTAEAVFAAWPDVETDSAGLAPDADTRLSAEQLDWAEVVFVMERAH CCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHH KARLAAQFGAHLRHKKIVCLDIPDRYVDMQPELVTLLERKAGPFLRG HHHHHHHHHHHCCCCEEEEEECCCHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRALFICSRNRLRSPTAEAVFAAWPDVETDSAGLAPDADTRLSAEQLDWAEVVFVMERAH CCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHH KARLAAQFGAHLRHKKIVCLDIPDRYVDMQPELVTLLERKAGPFLRG HHHHHHHHHHHCCCCEEEEEECCCHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA