| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is fct [H]
Identifier: 78066260
GI number: 78066260
Start: 1804051
End: 1806303
Strand: Direct
Name: fct [H]
Synonym: Bcep18194_A4790
Alternate gene names: 78066260
Gene position: 1804051-1806303 (Clockwise)
Preceding gene: 78066259
Following gene: 78066261
Centisome position: 48.84
GC content: 66.44
Gene sequence:
>2253_bases ATGAAAAAAGTGGAGCAGAGAAAGATGGAGTGGGCAACAGGCACGCGTTTGCGTGCGATCGCAGCCGCGGCGAGCGTGGC GTTCGGTGTGGCGGCAGGGCAGGCACATGCCCAGGCGGCGCCGGCCGTGAACGCAGGCGCAGCGGCGTCGGCCAGCAGTG CGCAGAACGGTGCGGCGGCGAGTGCGTCGGCCGGCACGCTGCCGACGATCAACGTCAACGCAGCCTCGGAAGGAGACGGT ACGGTCGGGCTCGTCGCGAAGCGCAGCCGGACCGGCACGAAGACGGATACGCCGATCAACGAGATCCCGCAGACGATCAA CATCGTCACCGCGCAGCAGATCGAGATGACCGGCGCGACCGACGTGAACGCGGCACTGCGCTACGTGCCGGGCTTTTCGT CGTACGGTTCGGACAACCGTTCCGACTGGTACTCGGCGCTGCGCGGCTTCACGCCGACCGCGTACGTGAACGGGCTGCAG GTGCCGAACACGATCAACCTGTCGAGCTGGCGCGTCGATCCGTACATGATCGACAGCATCAGCGTGCTGCGCGGGCCGAC GTCGGTGCTGTACGGCGCGGGCGACCCGGGCGCGATCATCGACGTGCAGACCAAGCTCGCCGACGGCGAGCGCGTGCGCG AGGCCGGCGTGCAGATCGGCAACTACGCGCGCAAGCAGTTCATGATCGACGTCGGCGACAAGCTCGACCCGGACGGCAAG TACGCGTACCGGTTCGTCGGCGTCGCGCGTGACGGCAACGCGGTGACCGGCCCGAACAACGACCAGCGCGTCGCGCTCGC GCCGTCGTTCCGCTGGCGTCCGAACGCGGATACGTCGCTGACGCTGTCGGCCACCTATCTGCAGGACTGGGGCGACATCT CGTCGAACTTCCTGCCCGCGCAGGGGACGGTGCTGCCGAACCCGAACGGCCAGATCAACAAGGACATCTACGAGGGCGAC GGGAACTTCAACTACTACCGCAAGAAGCAGTGGTCGGTCGGTTACCAGTTCGAGCAGAACCTGACGCCCGCCTGGACGTT CCGCCAGAACGTGCGCCTGATGCACCTGTCGCTCGACAACGGTTCGGTGTGGGGCGCCGGCTTCTCCGACGATACGCTGA CCACCGTCAACCGGTGGGCCGGCGTGTTCCAGATGAACTACAGCCGCTTCGACATCGACAACAACGTCGAAGGCCGCTTC GCGACGGGCCCGCTGCAGCACACGCTGCTGCTCGGCTTCCAGTACAACCGCCAGACCGCAACGGACAGCGAATGGCTGGC CGCCGCGCCGACGCTGAACCTGTACAACCCGGTGTACGCGCCGGTCACGACGGCCGTGTTCTCCGATCCGAACACCACGT ATCGCACGAACACGTACACGACGATGAACACGTTCGGCCTGTACGCGCAGGACCAGATCAAGTGGAACCGCTGGACGCTG ACGCTCGGCGGCCGCGAGGACTGGGTCAACATGCGGATGGACGACCGCGCGGCCGGCACGTCGACGAAGGCGGACGTCAC GGCATTCACCGGCCGCGTCGGCCTCACGTACCAGGGCGATTACGGGCTGTCGCCGTACGTCAGCTACGCGACGTCGTTCA ACCCGCTGATCGGCGTGAACCTGCTCGGCGGTGGGCTGCCGCAGCCGACGCGCGGCAAGCAGATCGAGGCCGGCCTGCGC TGGCAGCCGCCCGGCAAGAACCTGATGCTGAACGCGGCGATCTACCAGATCAACCAGACCAACGTGATCACGCCGGCACT GCTGAGCCAGGACGATACCGGCACGAAGTCGGTGCAGACCGGCGAAGTGCGTTCGCGCGGGATCGAGCTGAGCGCGACCG GCAAGGTCACGCGCAACCTGTCGGTGATCGCGTCGTACGTGTACCAGGACGTGAAGAACGTGAAGGCCAACGACGTGTCG CTGAACAACTGGCCGGTCGACGTTCCGCGTCCGCGCCAGATGGCGTCGCTGTGGACCGACTGGACGTGGCACACGGGGCC GCTGGCGGGCTTCGGTCTCGGCGGCGGCATTCGCTACCAGAGCGCGTCGGCCGGTGGGGCCGACAACGCGCTGACGGTAT CGAGCGTCACGCTGTTCGACGCGGGTGTGCACTACGACACGCGTAACTGGCGCTTCGCCGTGAATGGGACGAACCTGGCC AACCGCCACTACATCAGCGGTTGCCAGTCGACGAGCGTCTGCATTTTCGGCACCGACCGTACCGTGATCGCGACCGCGAA ATACAACTGGTGA
Upstream 100 bases:
>100_bases GAAGGCGCGGCCCGGGCAGCACAGGAAAAACGACAGGAAAACGGGGCGAGCGCGAGCCGGATGGCTTTCGCTCTTTGACA AAGGCGCGGTCGGAGACCGC
Downstream 100 bases:
>100_bases CGTCGCGCGCCGCGGCCCGCCGGCCGGCCTTCGTGGCCGGCGCGGGCGGGCCGCGGCGCCTTCGTCCGCTTTTCCACGAC GTATCCATGCCGAAGAAAAA
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 750; Mature: 750
Protein sequence:
>750_residues MKKVEQRKMEWATGTRLRAIAAAASVAFGVAAGQAHAQAAPAVNAGAAASASSAQNGAAASASAGTLPTINVNAASEGDG TVGLVAKRSRTGTKTDTPINEIPQTINIVTAQQIEMTGATDVNAALRYVPGFSSYGSDNRSDWYSALRGFTPTAYVNGLQ VPNTINLSSWRVDPYMIDSISVLRGPTSVLYGAGDPGAIIDVQTKLADGERVREAGVQIGNYARKQFMIDVGDKLDPDGK YAYRFVGVARDGNAVTGPNNDQRVALAPSFRWRPNADTSLTLSATYLQDWGDISSNFLPAQGTVLPNPNGQINKDIYEGD GNFNYYRKKQWSVGYQFEQNLTPAWTFRQNVRLMHLSLDNGSVWGAGFSDDTLTTVNRWAGVFQMNYSRFDIDNNVEGRF ATGPLQHTLLLGFQYNRQTATDSEWLAAAPTLNLYNPVYAPVTTAVFSDPNTTYRTNTYTTMNTFGLYAQDQIKWNRWTL TLGGREDWVNMRMDDRAAGTSTKADVTAFTGRVGLTYQGDYGLSPYVSYATSFNPLIGVNLLGGGLPQPTRGKQIEAGLR WQPPGKNLMLNAAIYQINQTNVITPALLSQDDTGTKSVQTGEVRSRGIELSATGKVTRNLSVIASYVYQDVKNVKANDVS LNNWPVDVPRPRQMASLWTDWTWHTGPLAGFGLGGGIRYQSASAGGADNALTVSSVTLFDAGVHYDTRNWRFAVNGTNLA NRHYISGCQSTSVCIFGTDRTVIATAKYNW
Sequences:
>Translated_750_residues MKKVEQRKMEWATGTRLRAIAAAASVAFGVAAGQAHAQAAPAVNAGAAASASSAQNGAAASASAGTLPTINVNAASEGDG TVGLVAKRSRTGTKTDTPINEIPQTINIVTAQQIEMTGATDVNAALRYVPGFSSYGSDNRSDWYSALRGFTPTAYVNGLQ VPNTINLSSWRVDPYMIDSISVLRGPTSVLYGAGDPGAIIDVQTKLADGERVREAGVQIGNYARKQFMIDVGDKLDPDGK YAYRFVGVARDGNAVTGPNNDQRVALAPSFRWRPNADTSLTLSATYLQDWGDISSNFLPAQGTVLPNPNGQINKDIYEGD GNFNYYRKKQWSVGYQFEQNLTPAWTFRQNVRLMHLSLDNGSVWGAGFSDDTLTTVNRWAGVFQMNYSRFDIDNNVEGRF ATGPLQHTLLLGFQYNRQTATDSEWLAAAPTLNLYNPVYAPVTTAVFSDPNTTYRTNTYTTMNTFGLYAQDQIKWNRWTL TLGGREDWVNMRMDDRAAGTSTKADVTAFTGRVGLTYQGDYGLSPYVSYATSFNPLIGVNLLGGGLPQPTRGKQIEAGLR WQPPGKNLMLNAAIYQINQTNVITPALLSQDDTGTKSVQTGEVRSRGIELSATGKVTRNLSVIASYVYQDVKNVKANDVS LNNWPVDVPRPRQMASLWTDWTWHTGPLAGFGLGGGIRYQSASAGGADNALTVSSVTLFDAGVHYDTRNWRFAVNGTNLA NRHYISGCQSTSVCIFGTDRTVIATAKYNW >Mature_750_residues MKKVEQRKMEWATGTRLRAIAAAASVAFGVAAGQAHAQAAPAVNAGAAASASSAQNGAAASASAGTLPTINVNAASEGDG TVGLVAKRSRTGTKTDTPINEIPQTINIVTAQQIEMTGATDVNAALRYVPGFSSYGSDNRSDWYSALRGFTPTAYVNGLQ VPNTINLSSWRVDPYMIDSISVLRGPTSVLYGAGDPGAIIDVQTKLADGERVREAGVQIGNYARKQFMIDVGDKLDPDGK YAYRFVGVARDGNAVTGPNNDQRVALAPSFRWRPNADTSLTLSATYLQDWGDISSNFLPAQGTVLPNPNGQINKDIYEGD GNFNYYRKKQWSVGYQFEQNLTPAWTFRQNVRLMHLSLDNGSVWGAGFSDDTLTTVNRWAGVFQMNYSRFDIDNNVEGRF ATGPLQHTLLLGFQYNRQTATDSEWLAAAPTLNLYNPVYAPVTTAVFSDPNTTYRTNTYTTMNTFGLYAQDQIKWNRWTL TLGGREDWVNMRMDDRAAGTSTKADVTAFTGRVGLTYQGDYGLSPYVSYATSFNPLIGVNLLGGGLPQPTRGKQIEAGLR WQPPGKNLMLNAAIYQINQTNVITPALLSQDDTGTKSVQTGEVRSRGIELSATGKVTRNLSVIASYVYQDVKNVKANDVS LNNWPVDVPRPRQMASLWTDWTWHTGPLAGFGLGGGIRYQSASAGGADNALTVSSVTLFDAGVHYDTRNWRFAVNGTNLA NRHYISGCQSTSVCIFGTDRTVIATAKYNW
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=743, Percent_Identity=33.3781965006729, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI1787024, Length=737, Percent_Identity=22.9308005427408, Blast_Score=106, Evalue=6e-24, Organism=Escherichia coli, GI1787344, Length=771, Percent_Identity=23.4760051880674, Blast_Score=86, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81348; Mature: 81348
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVEQRKMEWATGTRLRAIAAAASVAFGVAAGQAHAQAAPAVNAGAAASASSAQNGAAA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCHHCCCCCCCCCCCCCCCCCCCCCCC SASAGTLPTINVNAASEGDGTVGLVAKRSRTGTKTDTPINEIPQTINIVTAQQIEMTGAT CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHCCCEEEEEEEEEEEECCCC DVNAALRYVPGFSSYGSDNRSDWYSALRGFTPTAYVNGLQVPNTINLSSWRVDPYMIDSI CHHHHHEECCCCHHCCCCCHHHHHHHHHCCCCHHEECCCCCCCEECCCEEECCCEEECCC SVLRGPTSVLYGAGDPGAIIDVQTKLADGERVREAGVQIGNYARKQFMIDVGDKLDPDGK HHHCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHCCHHHCCCCEEEEEECCCCCCCCCC YAYRFVGVARDGNAVTGPNNDQRVALAPSFRWRPNADTSLTLSATYLQDWGDISSNFLPA EEEEEEEEECCCCEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCCCC QGTVLPNPNGQINKDIYEGDGNFNYYRKKQWSVGYQFEQNLTPAWTFRQNVRLMHLSLDN CCEECCCCCCCCCCEEEECCCCCCEEEEEECCCCEEECCCCCCEEEECCCCEEEEEEECC GSVWGAGFSDDTLTTVNRWAGVFQMNYSRFDIDNNVEGRFATGPLQHTLLLGFQYNRQTA CCEEECCCCCCCHHHHHHCCEEEEECCEEECCCCCCCCEEECCCCCEEEEEEEEECCCCC TDSEWLAAAPTLNLYNPVYAPVTTAVFSDPNTTYRTNTYTTMNTFGLYAQDQIKWNRWTL CCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECEEEEEEEEEEEEECCEEEEEEEE TLGGREDWVNMRMDDRAAGTSTKADVTAFTGRVGLTYQGDYGLSPYVSYATSFNPLIGVN EECCCCCEEEEEECCCCCCCCCCCEEEEEECEEEEEECCCCCCCHHHHHHCCCCCEEEEE LLGGGLPQPTRGKQIEAGLRWQPPGKNLMLNAAIYQINQTNVITPALLSQDDTGTKSVQT EECCCCCCCCCCCEEECCCEECCCCCCEEEEEEEEEECCCCEECHHHCCCCCCCCCCEEC GEVRSRGIELSATGKVTRNLSVIASYVYQDVKNVKANDVSLNNWPVDVPRPRQMASLWTD CCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHCC WTWHTGPLAGFGLGGGIRYQSASAGGADNALTVSSVTLFDAGVHYDTRNWRFAVNGTNLA CCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCEECCCCEEEEECCCCCC NRHYISGCQSTSVCIFGTDRTVIATAKYNW CCCEECCCCCCCEEEEECCCEEEEEEECCC >Mature Secondary Structure MKKVEQRKMEWATGTRLRAIAAAASVAFGVAAGQAHAQAAPAVNAGAAASASSAQNGAAA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCHHCCCCCCCCCCCCCCCCCCCCCCC SASAGTLPTINVNAASEGDGTVGLVAKRSRTGTKTDTPINEIPQTINIVTAQQIEMTGAT CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHCCCEEEEEEEEEEEECCCC DVNAALRYVPGFSSYGSDNRSDWYSALRGFTPTAYVNGLQVPNTINLSSWRVDPYMIDSI CHHHHHEECCCCHHCCCCCHHHHHHHHHCCCCHHEECCCCCCCEECCCEEECCCEEECCC SVLRGPTSVLYGAGDPGAIIDVQTKLADGERVREAGVQIGNYARKQFMIDVGDKLDPDGK HHHCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHCCHHHCCCCEEEEEECCCCCCCCCC YAYRFVGVARDGNAVTGPNNDQRVALAPSFRWRPNADTSLTLSATYLQDWGDISSNFLPA EEEEEEEEECCCCEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCCCC QGTVLPNPNGQINKDIYEGDGNFNYYRKKQWSVGYQFEQNLTPAWTFRQNVRLMHLSLDN CCEECCCCCCCCCCEEEECCCCCCEEEEEECCCCEEECCCCCCEEEECCCCEEEEEEECC GSVWGAGFSDDTLTTVNRWAGVFQMNYSRFDIDNNVEGRFATGPLQHTLLLGFQYNRQTA CCEEECCCCCCCHHHHHHCCEEEEECCEEECCCCCCCCEEECCCCCEEEEEEEEECCCCC TDSEWLAAAPTLNLYNPVYAPVTTAVFSDPNTTYRTNTYTTMNTFGLYAQDQIKWNRWTL CCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECEEEEEEEEEEEEECCEEEEEEEE TLGGREDWVNMRMDDRAAGTSTKADVTAFTGRVGLTYQGDYGLSPYVSYATSFNPLIGVN EECCCCCEEEEEECCCCCCCCCCCEEEEEECEEEEEECCCCCCCHHHHHHCCCCCEEEEE LLGGGLPQPTRGKQIEAGLRWQPPGKNLMLNAAIYQINQTNVITPALLSQDDTGTKSVQT EECCCCCCCCCCCEEECCCEECCCCCCEEEEEEEEEECCCCEECHHHCCCCCCCCCCEEC GEVRSRGIELSATGKVTRNLSVIASYVYQDVKNVKANDVSLNNWPVDVPRPRQMASLWTD CCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHCC WTWHTGPLAGFGLGGGIRYQSASAGGADNALTVSSVTLFDAGVHYDTRNWRFAVNGTNLA CCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCCEECCCCEEEEECCCCCC NRHYISGCQSTSVCIFGTDRTVIATAKYNW CCCEECCCCCCCEEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]