Click here to switch to the map view.

The map label for this gene is pvdA [H]

Identifier: 78066259

GI number: 78066259

Start: 1802652

End: 1804028

Strand: Direct

Name: pvdA [H]

Synonym: Bcep18194_A4789

Alternate gene names: 78066259

Gene position: 1802652-1804028 (Clockwise)

Preceding gene: 78066258

Following gene: 78066260

Centisome position: 48.8

GC content: 67.54

Gene sequence:

>1377_bases
ATGCAGAGAGAAACCGTATTCGACCTGATCGGCGTCGGCTTCGGGCCGTCGAATCTGGCGCTGGCCATCCGCCTCGAGGA
ACGGCGCGCGGCGCGCCCGTTCACCCATTGCTTCGTCGAGCGCCAGCCTGAATTCGGCTGGCATCGCGGAATGCTGCTCG
ACGACTGCCGGATGCAGATCTCGTTTCTGAAGGATCTCGTCACGATGCGCGATCCGACAAGCCGCTACACGTTCATCAAC
TACCTGTTCGAACGCGGCCGCCTGAACGAATTCGTCAACCTGAAGAACTTCTATCCGACCCGCGTCGAATTCCACGACTA
CTTGAGCTGGGTGGCCGAGGCGTTCGACGATAGCGTCCATTACAGCGAAACCGTCCTGGCGATCGAACCGGTACGCGGCG
ACGGCGAGAAGATCGACGTGCTGCGCGTGCTGTCGCGCGACGCGGCCGGCCACGAGCGCCAGCGCGTCACGCGCGCGCTG
TCGGTCGGCGTCGGCGGCACGCCGGCGGTTCCGGACGCGTTCGCCGCGCTCGGCCGCGACCGCGTGATCCACTCGTCGTC
GTACCTGACCGACATCGACCGGCTCGTCGCGTCGCCGGACGGTGAGCGCCGCCGCGTCGCGGTGATCGGCGCGGGGCAGA
GCGCGGCCGAGGTGTTCATCGATCTGGCACGTCGTTTCCCGCATGTCGACGCGAGCCTCGTGATGCGCGCCGGCGCACTG
AAGCCGGCGGACGACAGCCCGTTCGTCAACGAGATCTTCAGCCCCGAGTTCACCGATGTCGTCTATGCGCAGCCGCACGA
CGCGCGTCGCGCGCTGCTCGAGCGTTATCGCGACACGAACTACGCGGTGGTCGACCGGCCGCTGATCGAACAGATCTACG
AAATGCTGTACCTGCAGCGCATCGACGGCACGCCGCGTCATGCGTTGCTCGCGAACAGCGCGATCGAGGCCGCGGTGCGC
ACCGCCGACGGCCGCATCGAGCTGACGCTGCGCGACCGGATGAGCGGCGACACGCGCGTCGAGCGCTTCGACGCACTCGT
GCTGGCGACCGGCTATCGCCGCGACACGCATTCGGCGCTGCTCGAAGGGCTCGCGCCGCACCTGGGCGATGCGCTCGAGC
GCGGCGACGTCACGCGCGACTACCTGCTCGCGACGCCCGAGCACTTCGCGCCGCGCATCTACCTGCAAGGCTGCTGCGAA
GACAGCCACGGCCTGTCCGACACGCTGCTGTCGGTACTGGCGCGCCGCGCGGACGAAATCTGCGCGTCGCTCGAAGACGG
GATCGCGCCCGCCCATGAAGAAGGCGCGGCCCGGGCAGCACAGGAAAAACGACAGGAAAACGGGGCGAGCGCGAGCCGGA
TGGCTTTCGCTCTTTGA

Upstream 100 bases:

>100_bases
TGGCCGACGCGCAGCCGCTGTGGATGCGCACGCTGCGCGAGACGTTCTTCTCCGGCCGTCACGTCTGACGCGCCGGATTC
ACCGACAAGGGAGCTGAGAC

Downstream 100 bases:

>100_bases
CAAAGGCGCGGTCGGAGACCGCATGAAAAAAGTGGAGCAGAGAAAGATGGAGTGGGCAACAGGCACGCGTTTGCGTGCGA
TCGCAGCCGCGGCGAGCGTG

Product: lysine/ornithine N-monooxygenase

Products: NA

Alternate protein names: L-ornithine N(5)-oxygenase [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MQRETVFDLIGVGFGPSNLALAIRLEERRAARPFTHCFVERQPEFGWHRGMLLDDCRMQISFLKDLVTMRDPTSRYTFIN
YLFERGRLNEFVNLKNFYPTRVEFHDYLSWVAEAFDDSVHYSETVLAIEPVRGDGEKIDVLRVLSRDAAGHERQRVTRAL
SVGVGGTPAVPDAFAALGRDRVIHSSSYLTDIDRLVASPDGERRRVAVIGAGQSAAEVFIDLARRFPHVDASLVMRAGAL
KPADDSPFVNEIFSPEFTDVVYAQPHDARRALLERYRDTNYAVVDRPLIEQIYEMLYLQRIDGTPRHALLANSAIEAAVR
TADGRIELTLRDRMSGDTRVERFDALVLATGYRRDTHSALLEGLAPHLGDALERGDVTRDYLLATPEHFAPRIYLQGCCE
DSHGLSDTLLSVLARRADEICASLEDGIAPAHEEGAARAAQEKRQENGASASRMAFAL

Sequences:

>Translated_458_residues
MQRETVFDLIGVGFGPSNLALAIRLEERRAARPFTHCFVERQPEFGWHRGMLLDDCRMQISFLKDLVTMRDPTSRYTFIN
YLFERGRLNEFVNLKNFYPTRVEFHDYLSWVAEAFDDSVHYSETVLAIEPVRGDGEKIDVLRVLSRDAAGHERQRVTRAL
SVGVGGTPAVPDAFAALGRDRVIHSSSYLTDIDRLVASPDGERRRVAVIGAGQSAAEVFIDLARRFPHVDASLVMRAGAL
KPADDSPFVNEIFSPEFTDVVYAQPHDARRALLERYRDTNYAVVDRPLIEQIYEMLYLQRIDGTPRHALLANSAIEAAVR
TADGRIELTLRDRMSGDTRVERFDALVLATGYRRDTHSALLEGLAPHLGDALERGDVTRDYLLATPEHFAPRIYLQGCCE
DSHGLSDTLLSVLARRADEICASLEDGIAPAHEEGAARAAQEKRQENGASASRMAFAL
>Mature_458_residues
MQRETVFDLIGVGFGPSNLALAIRLEERRAARPFTHCFVERQPEFGWHRGMLLDDCRMQISFLKDLVTMRDPTSRYTFIN
YLFERGRLNEFVNLKNFYPTRVEFHDYLSWVAEAFDDSVHYSETVLAIEPVRGDGEKIDVLRVLSRDAAGHERQRVTRAL
SVGVGGTPAVPDAFAALGRDRVIHSSSYLTDIDRLVASPDGERRRVAVIGAGQSAAEVFIDLARRFPHVDASLVMRAGAL
KPADDSPFVNEIFSPEFTDVVYAQPHDARRALLERYRDTNYAVVDRPLIEQIYEMLYLQRIDGTPRHALLANSAIEAAVR
TADGRIELTLRDRMSGDTRVERFDALVLATGYRRDTHSALLEGLAPHLGDALERGDVTRDYLLATPEHFAPRIYLQGCCE
DSHGLSDTLLSVLARRADEICASLEDGIAPAHEEGAARAAQEKRQENGASASRMAFAL

Specific function: Catalyzes the hydroxylation of L-ornithine (L-Orn) which is later incorporated in ornibactin [H]

COG id: COG3486

COG function: function code Q; Lysine/ornithine N-monooxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51288; Mature: 51288

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRETVFDLIGVGFGPSNLALAIRLEERRAARPFTHCFVERQPEFGWHRGMLLDDCRMQI
CCCHHHHHHHHCCCCCCCEEEEEEEHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH
SFLKDLVTMRDPTSRYTFINYLFERGRLNEFVNLKNFYPTRVEFHDYLSWVAEAFDDSVH
HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
YSETVLAIEPVRGDGEKIDVLRVLSRDAAGHERQRVTRALSVGVGGTPAVPDAFAALGRD
CCCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC
RVIHSSSYLTDIDRLVASPDGERRRVAVIGAGQSAAEVFIDLARRFPHVDASLVMRAGAL
CEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCC
KPADDSPFVNEIFSPEFTDVVYAQPHDARRALLERYRDTNYAVVDRPLIEQIYEMLYLQR
CCCCCCCHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHH
IDGTPRHALLANSAIEAAVRTADGRIELTLRDRMSGDTRVERFDALVLATGYRRDTHSAL
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHEEECCCCCHHHHHH
LEGLAPHLGDALERGDVTRDYLLATPEHFAPRIYLQGCCEDSHGLSDTLLSVLARRADEI
HHHHHHHHHHHHHHCCCCHHHHEECCHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHH
CASLEDGIAPAHEEGAARAAQEKRQENGASASRMAFAL
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHEECC
>Mature Secondary Structure
MQRETVFDLIGVGFGPSNLALAIRLEERRAARPFTHCFVERQPEFGWHRGMLLDDCRMQI
CCCHHHHHHHHCCCCCCCEEEEEEEHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH
SFLKDLVTMRDPTSRYTFINYLFERGRLNEFVNLKNFYPTRVEFHDYLSWVAEAFDDSVH
HHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
YSETVLAIEPVRGDGEKIDVLRVLSRDAAGHERQRVTRALSVGVGGTPAVPDAFAALGRD
CCCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC
RVIHSSSYLTDIDRLVASPDGERRRVAVIGAGQSAAEVFIDLARRFPHVDASLVMRAGAL
CEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCC
KPADDSPFVNEIFSPEFTDVVYAQPHDARRALLERYRDTNYAVVDRPLIEQIYEMLYLQR
CCCCCCCHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHH
IDGTPRHALLANSAIEAAVRTADGRIELTLRDRMSGDTRVERFDALVLATGYRRDTHSAL
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHEEECCCCCHHHHHH
LEGLAPHLGDALERGDVTRDYLLATPEHFAPRIYLQGCCEDSHGLSDTLLSVLARRADEI
HHHHHHHHHHHHHHCCCCHHHHEECCHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHH
CASLEDGIAPAHEEGAARAAQEKRQENGASASRMAFAL
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA