| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is fecB [H]
Identifier: 78066254
GI number: 78066254
Start: 1783580
End: 1784617
Strand: Direct
Name: fecB [H]
Synonym: Bcep18194_A4784
Alternate gene names: 78066254
Gene position: 1783580-1784617 (Clockwise)
Preceding gene: 78066253
Following gene: 78066256
Centisome position: 48.28
GC content: 68.98
Gene sequence:
>1038_bases GTGACGGATGCCGGCCGCCGGCATGCGCTCGGCGCACTCGCGGCGCTCGGTGCCGCGTGCTGCGGTGCGCTTTCCCTGTC GTCCCGCGCCGTTGCCGCGACGCTCGATGCCCATCGCGCGCAGGGCGTGCGTGCGCCGGGTGCGGTGTCGCTGGCCGGTA ATCCCGTCGTGTCGCAGGCGAGCGCGACGATGCCGGTGCGGCCGCAGCGCGTGGTCGCACTCGACTTCATGTTCGCGGAA AGCGTGATCGCGCTCGACATCGTGCCGGTCGGGATGGCCGATACCGCGTTCTATCCGGGCTGGCTCGGCTATCAAAGCGA GCGGCTCGCGAACGTGACCGATATCGGTTCGCGCCAGGAGCCTGGCCTCGAAGCGATCGCAGCGGTCAAGCCCGACCTGA TCATCGGCGTCGGCTTCCGGCATGCGCCGATTTTCGATGCGCTCGACCGGATCGCGCCGACGATCCTGTTCCAGTTCAGC CCGAACGTGTCTGATGGCGGCGTGCCGGTCACGCAGCTCGACTGGATGCGGCAGATCTTCCGGACGATCGGTGCGGTGAC GGGGCGCGACGCGCGTGCGCAGGCGGTCGATGCGCAGCTCGATGCGGGCATCGCGCGCAATGCGGCGCGGCTCGCGGCTG CGGGCAGAAAAGGCGAGCGCGTCGCGCTGCTGCAGGATCTCGGCTTGCCCGACCGCTACTGGGCCTATACGGGCAACAGC ACGTCGGCGGGTCTCGCGCGGGCGCTCGGGCTCGATCCGTGGCCGAAGAAGCCGACGCGGGAAGGCACGCTCTACGTGAC GTCGGCCGACCTGCTCAAGCAGCGTGAACTGGCCGTGCTGTTCGTGACCGCATCGGGCATGGACGTACCGCTGTCCGCGA AACTCGATTCGCCGGTGTGGCGCTACGTGCCCGCGATGAAGGACCACCGGATCGCGCTCATCGAACGCAATATCTGGGGG TTCGGCGGGCCGATGTCGGCGCTGAAACTGGCCGACGTGATGACCGATACGATGCTGAAGCTGCCGGCCGTGCGCTGA
Upstream 100 bases:
>100_bases GCCTGCGCTATGAAATTCCTGGAGAAACGCAACTGTGTGGAAGCTGCCCCCTGCTACTGACGATGGACGACGCGGCGCTG GCCGGGCAGGACGCGATCCG
Downstream 100 bases:
>100_bases GTGCGCGGCGGTCGGTCGGCGGGTGACGCCGCTTCGACTTCAACTTCGACGGGTAGGGCGTCGCGGTCGGCCGGTGCGCC ACGCGGCGATCCGGCTCGGT
Product: ABC Fe3+-siderophore transporter, periplasmic ligand binding protein
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: Iron(III) dicitrate-binding periplasmic protein [H]
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTDAGRRHALGALAALGAACCGALSLSSRAVAATLDAHRAQGVRAPGAVSLAGNPVVSQASATMPVRPQRVVALDFMFAE SVIALDIVPVGMADTAFYPGWLGYQSERLANVTDIGSRQEPGLEAIAAVKPDLIIGVGFRHAPIFDALDRIAPTILFQFS PNVSDGGVPVTQLDWMRQIFRTIGAVTGRDARAQAVDAQLDAGIARNAARLAAAGRKGERVALLQDLGLPDRYWAYTGNS TSAGLARALGLDPWPKKPTREGTLYVTSADLLKQRELAVLFVTASGMDVPLSAKLDSPVWRYVPAMKDHRIALIERNIWG FGGPMSALKLADVMTDTMLKLPAVR
Sequences:
>Translated_345_residues MTDAGRRHALGALAALGAACCGALSLSSRAVAATLDAHRAQGVRAPGAVSLAGNPVVSQASATMPVRPQRVVALDFMFAE SVIALDIVPVGMADTAFYPGWLGYQSERLANVTDIGSRQEPGLEAIAAVKPDLIIGVGFRHAPIFDALDRIAPTILFQFS PNVSDGGVPVTQLDWMRQIFRTIGAVTGRDARAQAVDAQLDAGIARNAARLAAAGRKGERVALLQDLGLPDRYWAYTGNS TSAGLARALGLDPWPKKPTREGTLYVTSADLLKQRELAVLFVTASGMDVPLSAKLDSPVWRYVPAMKDHRIALIERNIWG FGGPMSALKLADVMTDTMLKLPAVR >Mature_344_residues TDAGRRHALGALAALGAACCGALSLSSRAVAATLDAHRAQGVRAPGAVSLAGNPVVSQASATMPVRPQRVVALDFMFAES VIALDIVPVGMADTAFYPGWLGYQSERLANVTDIGSRQEPGLEAIAAVKPDLIIGVGFRHAPIFDALDRIAPTILFQFSP NVSDGGVPVTQLDWMRQIFRTIGAVTGRDARAQAVDAQLDAGIARNAARLAAAGRKGERVALLQDLGLPDRYWAYTGNST SAGLARALGLDPWPKKPTREGTLYVTSADLLKQRELAVLFVTASGMDVPLSAKLDSPVWRYVPAMKDHRIALIERNIWGF GGPMSALKLADVMTDTMLKLPAVR
Specific function: Binds citrate-dependent Fe(3+); part of the binding- protein-dependent transport system for uptake of citrate-dependent Fe(3+) [H]
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87082411, Length=267, Percent_Identity=27.3408239700375, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786346, Length=276, Percent_Identity=26.4492753623188, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 36604; Mature: 36472
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAGRRHALGALAALGAACCGALSLSSRAVAATLDAHRAQGVRAPGAVSLAGNPVVSQA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHCCCCCCCEEEECCCCCCCCC SATMPVRPQRVVALDFMFAESVIALDIVPVGMADTAFYPGWLGYQSERLANVTDIGSRQE CCCCCCCCCEEEEEHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCHHCCCCCCC PGLEAIAAVKPDLIIGVGFRHAPIFDALDRIAPTILFQFSPNVSDGGVPVTQLDWMRQIF CCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHH RTIGAVTGRDARAQAVDAQLDAGIARNAARLAAAGRKGERVALLQDLGLPDRYWAYTGNS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCEEEEECCC TSAGLARALGLDPWPKKPTREGTLYVTSADLLKQRELAVLFVTASGMDVPLSAKLDSPVW CHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHH RYVPAMKDHRIALIERNIWGFGGPMSALKLADVMTDTMLKLPAVR HHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDAGRRHALGALAALGAACCGALSLSSRAVAATLDAHRAQGVRAPGAVSLAGNPVVSQA CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHCCCCCCCEEEECCCCCCCCC SATMPVRPQRVVALDFMFAESVIALDIVPVGMADTAFYPGWLGYQSERLANVTDIGSRQE CCCCCCCCCEEEEEHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCHHCCCCCCC PGLEAIAAVKPDLIIGVGFRHAPIFDALDRIAPTILFQFSPNVSDGGVPVTQLDWMRQIF CCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHH RTIGAVTGRDARAQAVDAQLDAGIARNAARLAAAGRKGERVALLQDLGLPDRYWAYTGNS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCEEEEECCC TSAGLARALGLDPWPKKPTREGTLYVTSADLLKQRELAVLFVTASGMDVPLSAKLDSPVW CHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHH RYVPAMKDHRIALIERNIWGFGGPMSALKLADVMTDTMLKLPAVR HHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2651410; 7610040; 9278503 [H]