| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066250
Identifier: 78066250
GI number: 78066250
Start: 1778841
End: 1779848
Strand: Direct
Name: 78066250
Synonym: Bcep18194_A4780
Alternate gene names: NA
Gene position: 1778841-1779848 (Clockwise)
Preceding gene: 78066249
Following gene: 78066251
Centisome position: 48.15
GC content: 68.55
Gene sequence:
>1008_bases ATGACCCTGCTTTCGTTGCCGACGCTCGACGACCTGCGTATCGAGCCGGGGCTGCCCACCGTCGTGTCGCCGCGCGGCAG CGACGGAATGTCGATCGACGATGTCGCGCCGCTGGCGCGCGAGATCGCGGCCGACACGCTCGAACGGGCGGGCGGCGTGC TGTTCACAGGTTTTCACGTGCCGTCGATCGACACGTTCCAGCAGTTCGCGGCGTCGTTCGGCGATCCGCTGATCGGCTAT GAATACGCATCGACGCCGCGCAGCCAGGTCGAAGGCGCGGTCTACACGTCGACCGAATACCCGCCGCACCGCGCGATACC GCTGCACAACGAGCAGTCGTACACGCGCGAATGGCCGCTGCGGATCTGGTTCCACTGCGCGCTCGCGGCGCCGAAGGGCG GTGCGACGCCGATCGCGGACAGCCGCGCCGTCTACCGCGCGCTCGATCCGGCGCTGATTGCGCGCTTCGAGAAGCGCGAA CTGCTGTACGTGCGCAATTTCGGGCAGGGGCTCGATCTGCCGTGGCAGCAGTCGTTCGGTACCGACGAGCCGGCCGAAGT CGAACGGATGTGCGCGGTGCGCGGCATCGAATGCGCGTGGCGCACCGACGACGACGGCGAGCTGCTGCTGCGCACCCGCG AACGTTGCCAGGCCGTCGCGCGCCATCCGCGCACCGGCGACCGCGTGTGGTTCAACCAGGCGAACCTGTTTCACCTGTCG GCGCTCGACGACGACATGCAGGAAGCGCTCGTCGACGCGGTCGGGCTCGAGAACGTGCCGCGCAACGTGTATTACGGCGA CGGCGAACCGCTCGAAGCCGACGCGCTCGCGGAGATCCGCGGCGTGCTCGACCAGCAGCGCATCGTGTTCCCGTGGCGCA CGGGCGACGTGCTGATGCTCGACAACATGCTGACCGCGCATGCGCGCGACCCGTTCGAGGGGCCGCGCAAGGTCGTCGTC GCGATGGCGCAGAGTTATACGGTCCCGCGCGACCGAACGGAGGATTGA
Upstream 100 bases:
>100_bases GCCCCGCAAGCCTGCGCCGCGCGATGGACGGCGAGCGCGCATCGCGCGCGTCGTGACCTGCTGCGCCGCGACCCGGCGCA CCACCTGAAGAGGACGTTGC
Downstream 100 bases:
>100_bases TGACGCGTAGTACCGCCGCGCTTGCCGCGCGCGGGCTGTCGGTAGGGTATCGCGACCATGTCGTGATCGACGGGCTGGAC CTGTCGATCGCGGCCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein B; Regulatory Protein; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Pyoverdine Biosynthesis Regulatory Gene; Amino Acid Adenylation Domain-Containing Protein; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Syrp Like Protein Albicidin Biosynthesis Regulation; Taurine Catabolism Dioxygenase Taud/Tfda; Regulatory Protein SyrP-Like; SyrP-Like Regulatory Protein; NRPS-Like Protein; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Syringomycin Synthesis Regulator SyrP; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTLLSLPTLDDLRIEPGLPTVVSPRGSDGMSIDDVAPLAREIAADTLERAGGVLFTGFHVPSIDTFQQFAASFGDPLIGY EYASTPRSQVEGAVYTSTEYPPHRAIPLHNEQSYTREWPLRIWFHCALAAPKGGATPIADSRAVYRALDPALIARFEKRE LLYVRNFGQGLDLPWQQSFGTDEPAEVERMCAVRGIECAWRTDDDGELLLRTRERCQAVARHPRTGDRVWFNQANLFHLS ALDDDMQEALVDAVGLENVPRNVYYGDGEPLEADALAEIRGVLDQQRIVFPWRTGDVLMLDNMLTAHARDPFEGPRKVVV AMAQSYTVPRDRTED
Sequences:
>Translated_335_residues MTLLSLPTLDDLRIEPGLPTVVSPRGSDGMSIDDVAPLAREIAADTLERAGGVLFTGFHVPSIDTFQQFAASFGDPLIGY EYASTPRSQVEGAVYTSTEYPPHRAIPLHNEQSYTREWPLRIWFHCALAAPKGGATPIADSRAVYRALDPALIARFEKRE LLYVRNFGQGLDLPWQQSFGTDEPAEVERMCAVRGIECAWRTDDDGELLLRTRERCQAVARHPRTGDRVWFNQANLFHLS ALDDDMQEALVDAVGLENVPRNVYYGDGEPLEADALAEIRGVLDQQRIVFPWRTGDVLMLDNMLTAHARDPFEGPRKVVV AMAQSYTVPRDRTED >Mature_334_residues TLLSLPTLDDLRIEPGLPTVVSPRGSDGMSIDDVAPLAREIAADTLERAGGVLFTGFHVPSIDTFQQFAASFGDPLIGYE YASTPRSQVEGAVYTSTEYPPHRAIPLHNEQSYTREWPLRIWFHCALAAPKGGATPIADSRAVYRALDPALIARFEKREL LYVRNFGQGLDLPWQQSFGTDEPAEVERMCAVRGIECAWRTDDDGELLLRTRERCQAVARHPRTGDRVWFNQANLFHLSA LDDDMQEALVDAVGLENVPRNVYYGDGEPLEADALAEIRGVLDQQRIVFPWRTGDVLMLDNMLTAHARDPFEGPRKVVVA MAQSYTVPRDRTED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37441; Mature: 37309
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLSLPTLDDLRIEPGLPTVVSPRGSDGMSIDDVAPLAREIAADTLERAGGVLFTGFHV CCEECCCCCCCCEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC PSIDTFQQFAASFGDPLIGYEYASTPRSQVEGAVYTSTEYPPHRAIPLHNEQSYTREWPL CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCE RIWFHCALAAPKGGATPIADSRAVYRALDPALIARFEKRELLYVRNFGQGLDLPWQQSFG EEEEEEEEECCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHEEEEECCCCCCCCCHHHCCC TDEPAEVERMCAVRGIECAWRTDDDGELLLRTRERCQAVARHPRTGDRVWFNQANLFHLS CCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEE ALDDDMQEALVDAVGLENVPRNVYYGDGEPLEADALAEIRGVLDQQRIVFPWRTGDVLML CCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEE DNMLTAHARDPFEGPRKVVVAMAQSYTVPRDRTED CCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TLLSLPTLDDLRIEPGLPTVVSPRGSDGMSIDDVAPLAREIAADTLERAGGVLFTGFHV CEECCCCCCCCEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC PSIDTFQQFAASFGDPLIGYEYASTPRSQVEGAVYTSTEYPPHRAIPLHNEQSYTREWPL CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCE RIWFHCALAAPKGGATPIADSRAVYRALDPALIARFEKRELLYVRNFGQGLDLPWQQSFG EEEEEEEEECCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHEEEEECCCCCCCCCHHHCCC TDEPAEVERMCAVRGIECAWRTDDDGELLLRTRERCQAVARHPRTGDRVWFNQANLFHLS CCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEE ALDDDMQEALVDAVGLENVPRNVYYGDGEPLEADALAEIRGVLDQQRIVFPWRTGDVLML CCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEE DNMLTAHARDPFEGPRKVVVAMAQSYTVPRDRTED CCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA