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The map label for this gene is yebA [C]

Identifier: 78066235

GI number: 78066235

Start: 1761645

End: 1762907

Strand: Reverse

Name: yebA [C]

Synonym: Bcep18194_A4765

Alternate gene names: 78066235

Gene position: 1762907-1761645 (Counterclockwise)

Preceding gene: 78066236

Following gene: 78066225

Centisome position: 47.72

GC content: 69.52

Gene sequence:

>1263_bases
TTGGTCAAGTCTGCCGCTACTCCTGATGCTTTCGCGCCCGGCCGCGCGCAGCGCATTGCGCGCGCGCTCGTGCCGGCCGC
CGTGCTCGGCGCCCTCGCCGCACTCGGCCTCGCCGCGTTGCCGGCCGTGTCGCAACTGCCGGGCGCCGTCGATTCGGGCA
CGGCCGCGCTGCCGCAGCGCGTGCTGTCCGACACGCCGTTTCCCACCGCGCAGCATTTCGTGACGAGTGAGCTCGCCCGC
ACGATCGGCGAGCGCAACGATGCCGGCGAACACAACGATCGCAGCCAGCAGCCGGGCCTGTTCGCGCCGCTCAGCGCGCA
CCGCAACGACATGCTCGGCTACGCGAACCTGTTCCAGTTCGCGGCCCCTGAAAACCAGCACGGGATGCGCGCGGGCGACA
TCGAGCTCACGCTGTCCGATACGCTGAACCGTCTCGACGTGCCGCCCGAGGTGCGCATCCAGCTCGGCGATCTCGTCAGC
GGCAAGGTCGCGATGCGTGCCAGCGCGCAGCGCGGCGACTACTACCGCGTTGCATTCGAGTCGAACGACGGCACGCCGCG
CCTCACCGCGCTCGAACTGCGCGTCGCCGGCCGCACGTTCGGCGCGATCTGGTTCCGCGCGCCGGGCGCCGAGCACGGCG
CATACTACGCACTCGACGGCTCGCCGCTCGAAGCCGCCGCCTTCACGATGCCGGTCAAGTGGACGCGTATCAGCTCGTTC
TTCGGCGAACGCATCCATCCGCTGTCGCAGGCGATGGCGTTCCACACGGGCGTCGATCTCGCCGCGCCGAGCGGTACGCC
CGTCGACGCAGCAGCCGACGGCGTCGTGTCGTTCGTCGGCACCGATCCGGGCGGCTACGGCCGCTACGTGATCGTCGATC
ACGCCGATGGTTACTCGACCTACTACGCGCACCTGTCCGCGTTCGCGCACGGCCTCAAAACGGGCGAGACCGTGAAGCAG
GGCCAGCGCATCGGCTCGGTCGGGATGACGGGCGCCGCGACGGGCCCGCACCTGCACTTCGAGGTGCGCGTCGCGAACAA
TCCGGTCGATCCGCTCGTCACGCTCGCGAGCGCGCAAACGGCGCTGTCAGACATGCAGCTCACCGCCTTCCGCCAGGAGG
CGGCGCAATGGCGCTTCCGTCTCGCATCGATCAATACGGCGCCGTTCGCGTTCGCGCAGAACGACGGGCCGCTGTGGGGC
GATTTCGCGACCGATTCATCGACGCTGCGCGCCGTCTTCAATACGCATTACTCGGCGTCGTGA

Upstream 100 bases:

>100_bases
TGTTGCACGCCCGCCGCCCGCCCCGTCGCTGCCCGACGGATGTTGCCGCCGGTGGCCCCTGCCCACACCCCTTTGAACCG
CTTTCCTGGATGTGGACACC

Downstream 100 bases:

>100_bases
TGCACCTGCCGCCTGCCGTTGCTCGACGAGCAGCGGCGCGTGGCAGGTTCTCTACACGCCTTGCCCCTCTCCTTGCCTGC
CGGGCCTGACCTGCCTGGCG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MVKSAATPDAFAPGRAQRIARALVPAAVLGALAALGLAALPAVSQLPGAVDSGTAALPQRVLSDTPFPTAQHFVTSELAR
TIGERNDAGEHNDRSQQPGLFAPLSAHRNDMLGYANLFQFAAPENQHGMRAGDIELTLSDTLNRLDVPPEVRIQLGDLVS
GKVAMRASAQRGDYYRVAFESNDGTPRLTALELRVAGRTFGAIWFRAPGAEHGAYYALDGSPLEAAAFTMPVKWTRISSF
FGERIHPLSQAMAFHTGVDLAAPSGTPVDAAADGVVSFVGTDPGGYGRYVIVDHADGYSTYYAHLSAFAHGLKTGETVKQ
GQRIGSVGMTGAATGPHLHFEVRVANNPVDPLVTLASAQTALSDMQLTAFRQEAAQWRFRLASINTAPFAFAQNDGPLWG
DFATDSSTLRAVFNTHYSAS

Sequences:

>Translated_420_residues
MVKSAATPDAFAPGRAQRIARALVPAAVLGALAALGLAALPAVSQLPGAVDSGTAALPQRVLSDTPFPTAQHFVTSELAR
TIGERNDAGEHNDRSQQPGLFAPLSAHRNDMLGYANLFQFAAPENQHGMRAGDIELTLSDTLNRLDVPPEVRIQLGDLVS
GKVAMRASAQRGDYYRVAFESNDGTPRLTALELRVAGRTFGAIWFRAPGAEHGAYYALDGSPLEAAAFTMPVKWTRISSF
FGERIHPLSQAMAFHTGVDLAAPSGTPVDAAADGVVSFVGTDPGGYGRYVIVDHADGYSTYYAHLSAFAHGLKTGETVKQ
GQRIGSVGMTGAATGPHLHFEVRVANNPVDPLVTLASAQTALSDMQLTAFRQEAAQWRFRLASINTAPFAFAQNDGPLWG
DFATDSSTLRAVFNTHYSAS
>Mature_420_residues
MVKSAATPDAFAPGRAQRIARALVPAAVLGALAALGLAALPAVSQLPGAVDSGTAALPQRVLSDTPFPTAQHFVTSELAR
TIGERNDAGEHNDRSQQPGLFAPLSAHRNDMLGYANLFQFAAPENQHGMRAGDIELTLSDTLNRLDVPPEVRIQLGDLVS
GKVAMRASAQRGDYYRVAFESNDGTPRLTALELRVAGRTFGAIWFRAPGAEHGAYYALDGSPLEAAAFTMPVKWTRISSF
FGERIHPLSQAMAFHTGVDLAAPSGTPVDAAADGVVSFVGTDPGGYGRYVIVDHADGYSTYYAHLSAFAHGLKTGETVKQ
GQRIGSVGMTGAATGPHLHFEVRVANNPVDPLVTLASAQTALSDMQLTAFRQEAAQWRFRLASINTAPFAFAQNDGPLWG
DFATDSSTLRAVFNTHYSAS

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=190, Percent_Identity=38.4210526315789, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI87082174, Length=111, Percent_Identity=39.6396396396396, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1789099, Length=111, Percent_Identity=34.2342342342342, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 44534; Mature: 44534

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSAATPDAFAPGRAQRIARALVPAAVLGALAALGLAALPAVSQLPGAVDSGTAALPQR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
VLSDTPFPTAQHFVTSELARTIGERNDAGEHNDRSQQPGLFAPLSAHRNDMLGYANLFQF
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHHH
AAPENQHGMRAGDIELTLSDTLNRLDVPPEVRIQLGDLVSGKVAMRASAQRGDYYRVAFE
CCCCCCCCCEECCEEEEHHHHHHHCCCCHHHEEEECCCCCCCEEEEECCCCCCEEEEEEE
SNDGTPRLTALELRVAGRTFGAIWFRAPGAEHGAYYALDGSPLEAAAFTMPVKWTRISSF
CCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCCCCHHEEECCEEHHHHHHH
FGERIHPLSQAMAFHTGVDLAAPSGTPVDAAADGVVSFVGTDPGGYGRYVIVDHADGYST
HHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCEEEEEECCCCCCCCEEEEECCCCCHH
YYAHLSAFAHGLKTGETVKQGQRIGSVGMTGAATGPHLHFEVRVANNPVDPLVTLASAQT
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
ALSDMQLTAFRQEAAQWRFRLASINTAPFAFAQNDGPLWGDFATDSSTLRAVFNTHYSAS
HHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCEECCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVKSAATPDAFAPGRAQRIARALVPAAVLGALAALGLAALPAVSQLPGAVDSGTAALPQR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
VLSDTPFPTAQHFVTSELARTIGERNDAGEHNDRSQQPGLFAPLSAHRNDMLGYANLFQF
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCHHHCCCCHHHHHHHHHH
AAPENQHGMRAGDIELTLSDTLNRLDVPPEVRIQLGDLVSGKVAMRASAQRGDYYRVAFE
CCCCCCCCCEECCEEEEHHHHHHHCCCCHHHEEEECCCCCCCEEEEECCCCCCEEEEEEE
SNDGTPRLTALELRVAGRTFGAIWFRAPGAEHGAYYALDGSPLEAAAFTMPVKWTRISSF
CCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCCCCHHEEECCEEHHHHHHH
FGERIHPLSQAMAFHTGVDLAAPSGTPVDAAADGVVSFVGTDPGGYGRYVIVDHADGYST
HHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCEEEEEECCCCCCCCEEEEECCCCCHH
YYAHLSAFAHGLKTGETVKQGQRIGSVGMTGAATGPHLHFEVRVANNPVDPLVTLASAQT
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
ALSDMQLTAFRQEAAQWRFRLASINTAPFAFAQNDGPLWGDFATDSSTLRAVFNTHYSAS
HHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCEECCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]