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The map label for this gene is perR [C]

Identifier: 78066225

GI number: 78066225

Start: 1750892

End: 1751821

Strand: Reverse

Name: perR [C]

Synonym: Bcep18194_A4755

Alternate gene names: 78066225

Gene position: 1751821-1750892 (Counterclockwise)

Preceding gene: 78066235

Following gene: 78066208

Centisome position: 47.42

GC content: 70.0

Gene sequence:

>930_bases
ATGCAACGCGTTCCGTCCCTGAAACTGCTGACCGGCTTCGAAGCCGCGGCCCGGCTGGGTAATTTCTCGCGCGCGGCCGA
CGAGCTGCACCTGTCGCAATCGGCGATCAGCCATCAGATCCAGCAGCTCGAAGCGCAGCTCGGGCAGCCGCTGTTCCGCC
GGCGCGGCCGCGGTGTCGAACTGACCATCGCCGGCGAGGTCCTGCAGCGCAGCGTGCAGCGCGCGATGGACACGTTGCGC
GGCGGCCTCGACCGCATCGCGACCTACCTGAACCCGGGGCTCGTCGTGCTGGTGTGTCCCGCGCCGTTGCTGCACGGTTG
GCTGCAGCCGCGTCTCGAACAGTTGCAGCAGGTCCTGCCCGACCTGTGCCCGCTGCTGTCGACCGACGAAACCGCGCGCT
ACGTCGACGAGATCGACGTCGACATGACGATCGGCACGCGGCCGATGCTGCAGCCCGGCCTGCTGGATATCCCGTTCATG
CGGGACGAATGGGTGACGGTGTGCGCGACGCCGCTGGCGGAACAACTCGAACGCGTGCCGCGCGACGAGCACCCGCAGCA
CGCGGGAGTCATCTGTCTCGAAGCCAGCCTGACCGACGAGCGCCTGGCGACGGTGTTCCGCGAGCGGCTGTCGGCATTCC
GGATGCATGCGATCTACGACGACCAGCGGCTCGTGCTGGACGCCGTGCTGCGCGGCCGCGGCATCGCCTGCCTGCCGCGC
CTCGTCGCGCAGGCGGGCATCGACCAGCGCACCCTGACCGTGCTCGCCGGCTACCCGCGCCTGCCCGGCACCACGTGGTG
GTTGTCCCGCATGGAAGGCCCGTCGCGCTCGCCGATCGTCGAGCGGATGTTCGAATGGCTGGTCGAGCAAGGCAGCCTGT
CGAGCGCATCCGGTCCGGCGCCCGACCACGCACCGCCGCCACCCGCGTAA

Upstream 100 bases:

>100_bases
GTTCCGTCTCCGTTGTGATTGATGGCCGATTGTGCGTCAGGTTAAACTTGATGAATATTGATATTTATTGGCCGAATTAA
TCAATTCACCTCATACCTCG

Downstream 100 bases:

>100_bases
TCGCACGCCGCAAAAAAAACGTCCCGCTGGCTGGCGGGACGTTCGTCGTATTTCAAATGCACACTGCGCAGCCGATCACG
GCTCGTGACGCAGATACCCT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MQRVPSLKLLTGFEAAARLGNFSRAADELHLSQSAISHQIQQLEAQLGQPLFRRRGRGVELTIAGEVLQRSVQRAMDTLR
GGLDRIATYLNPGLVVLVCPAPLLHGWLQPRLEQLQQVLPDLCPLLSTDETARYVDEIDVDMTIGTRPMLQPGLLDIPFM
RDEWVTVCATPLAEQLERVPRDEHPQHAGVICLEASLTDERLATVFRERLSAFRMHAIYDDQRLVLDAVLRGRGIACLPR
LVAQAGIDQRTLTVLAGYPRLPGTTWWLSRMEGPSRSPIVERMFEWLVEQGSLSSASGPAPDHAPPPPA

Sequences:

>Translated_309_residues
MQRVPSLKLLTGFEAAARLGNFSRAADELHLSQSAISHQIQQLEAQLGQPLFRRRGRGVELTIAGEVLQRSVQRAMDTLR
GGLDRIATYLNPGLVVLVCPAPLLHGWLQPRLEQLQQVLPDLCPLLSTDETARYVDEIDVDMTIGTRPMLQPGLLDIPFM
RDEWVTVCATPLAEQLERVPRDEHPQHAGVICLEASLTDERLATVFRERLSAFRMHAIYDDQRLVLDAVLRGRGIACLPR
LVAQAGIDQRTLTVLAGYPRLPGTTWWLSRMEGPSRSPIVERMFEWLVEQGSLSSASGPAPDHAPPPPA
>Mature_309_residues
MQRVPSLKLLTGFEAAARLGNFSRAADELHLSQSAISHQIQQLEAQLGQPLFRRRGRGVELTIAGEVLQRSVQRAMDTLR
GGLDRIATYLNPGLVVLVCPAPLLHGWLQPRLEQLQQVLPDLCPLLSTDETARYVDEIDVDMTIGTRPMLQPGLLDIPFM
RDEWVTVCATPLAEQLERVPRDEHPQHAGVICLEASLTDERLATVFRERLSAFRMHAIYDDQRLVLDAVLRGRGIACLPR
LVAQAGIDQRTLTVLAGYPRLPGTTWWLSRMEGPSRSPIVERMFEWLVEQGSLSSASGPAPDHAPPPPA

Specific function: Apparent Regulatory Gene Involved In Peroxide Resistance In Stationary Phase. [C]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786448, Length=178, Percent_Identity=38.7640449438202, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789173, Length=256, Percent_Identity=29.296875, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI157672245, Length=172, Percent_Identity=33.1395348837209, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788706, Length=169, Percent_Identity=30.7692307692308, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1790208, Length=247, Percent_Identity=27.5303643724696, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081684, Length=310, Percent_Identity=24.1935483870968, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787128, Length=233, Percent_Identity=30.0429184549356, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34331; Mature: 34331

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVPSLKLLTGFEAAARLGNFSRAADELHLSQSAISHQIQQLEAQLGQPLFRRRGRGVE
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEE
LTIAGEVLQRSVQRAMDTLRGGLDRIATYLNPGLVVLVCPAPLLHGWLQPRLEQLQQVLP
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
DLCPLLSTDETARYVDEIDVDMTIGTRPMLQPGLLDIPFMRDEWVTVCATPLAEQLERVP
HHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
RDEHPQHAGVICLEASLTDERLATVFRERLSAFRMHAIYDDQRLVLDAVLRGRGIACLPR
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
LVAQAGIDQRTLTVLAGYPRLPGTTWWLSRMEGPSRSPIVERMFEWLVEQGSLSSASGPA
HHHHCCCCHHHHHEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDHAPPPPA
CCCCCCCCC
>Mature Secondary Structure
MQRVPSLKLLTGFEAAARLGNFSRAADELHLSQSAISHQIQQLEAQLGQPLFRRRGRGVE
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEE
LTIAGEVLQRSVQRAMDTLRGGLDRIATYLNPGLVVLVCPAPLLHGWLQPRLEQLQQVLP
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
DLCPLLSTDETARYVDEIDVDMTIGTRPMLQPGLLDIPFMRDEWVTVCATPLAEQLERVP
HHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
RDEHPQHAGVICLEASLTDERLATVFRERLSAFRMHAIYDDQRLVLDAVLRGRGIACLPR
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
LVAQAGIDQRTLTVLAGYPRLPGTTWWLSRMEGPSRSPIVERMFEWLVEQGSLSSASGPA
HHHHCCCCHHHHHEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDHAPPPPA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]